Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01613 Eucalyptus grandis HOM05D004537 ORTHO05D005492 3.8e-45 184.5 95 100.0
Sed0009736 Sechium edule HOM05D004537 ORTHO05D005492 1.0e-42 176.4 95 95.8
Sed0020696 Sechium edule HOM05D004537 ORTHO05D005492 1.0e-42 176.4 95 95.8
Hma1.2p1_0136F.1_g062006 Hydrangea macrophylla HOM05D004537 ORTHO05D005492 1.4e-42 176.0 95 95.8
DCAR_032457 Daucus carota HOM05D004537 ORTHO05D005492 1.8e-42 175.6 95 95.8
Dinv06725 Davidia involucrata HOM05D004537 ORTHO05D005492 1.8e-42 175.6 95 95.8
arahy.Tifrunner.gnm1.ann1.19WC2D Arachis hypogaea HOM05D004537 ORTHO05D005492 2.3e-42 175.3 95 95.8
arahy.Tifrunner.gnm1.ann1.FSQ0ED Arachis hypogaea HOM05D004537 ORTHO05D005492 2.3e-42 175.3 95 95.8
arahy.Tifrunner.gnm1.ann1.JYE7Y9 Arachis hypogaea HOM05D004537 ORTHO05D005492 2.3e-42 175.3 95 95.8
arahy.Tifrunner.gnm1.ann1.QL9R2N Arachis hypogaea HOM05D004537 ORTHO05D005492 2.3e-42 175.3 95 95.8
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 2.3e-42 175.3 95 95.8
Ca_30901_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 2.3e-42 175.3 95 95.8
HanXRQChr10g0310851 Helianthus annuus HOM05D004537 ORTHO05D005492 2.3e-42 175.3 95 94.7
HanXRQChr14g0433461 Helianthus annuus HOM05D004537 ORTHO05D005492 2.3e-42 175.3 95 94.7
HanXRQMTg0579341 Helianthus annuus HOM05D004537 ORTHO05D005492 2.3e-42 175.3 95 94.7
LjContig00315g0003687 Lotus japonicus HOM05D004537 ORTHO05D005492 2.3e-42 175.3 95 95.8
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 2.3e-42 175.3 95 95.8
QL10p061777 Quercus lobata HOM05D004537 ORTHO05D005492 2.3e-42 175.3 95 95.8
TPR.G4012 Trifolium pratense HOM05D004537 ORTHO05D005492 6.7e-42 173.7 94 95.7
CAN.G78.1 Capsicum annuum HOM05D004537 ORTHO05D005492 1.1e-41 172.9 95 94.7
Cpa.g.sc263.4 Carica papaya HOM05D004537 ORTHO05D005492 1.1e-41 172.9 95 94.7
Gorai.001G162500 Gossypium raimondii HOM05D004537 ORTHO05D005492 1.1e-41 172.9 95 94.7
Solyc00g500186.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 5.7e-41 170.6 95 93.7
Solyc00g500250.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 5.7e-41 170.6 95 93.7
Solyc00g500349.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 5.7e-41 170.6 95 93.7
PSO384G3370 Papaver somniferum HOM05D004537 ORTHO05D005492 7.4e-41 170.2 95 92.6
CDE02G4726 Ceratophyllum demersum HOM05D004537 ORTHO05D005492 9.7e-41 169.9 95 92.6
QL04p031979 Quercus lobata HOM05D004537 ORTHO05D005492 1.3e-40 169.5 95 92.6
Solyc07g019510.4 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.7e-40 169.1 95 92.6
COL.COLO4_04173 Corchorus olitorius HOM05D004537 ORTHO05D005492 2.2e-40 168.7 95 92.6
CAN.G1109.10 Capsicum annuum HOM05D004537 ORTHO05D005492 6.3e-40 167.2 95 91.6
Sed0024638 Sechium edule HOM05D004537 ORTHO05D005492 8.2e-40 166.8 89 95.5
unitig_87.g28001 Utricularia gibba HOM05D004537 ORTHO05D005492 8.2e-40 166.8 95 91.6
CAN.G1167.11 Capsicum annuum HOM05D004537 ORTHO05D005492 1.1e-39 166.4 91 94.5
Sopen05g012670 Solanum pennellii HOM05D004537 ORTHO05D005492 1.1e-39 166.4 91 94.5
ATMG01360 Arabidopsis thaliana HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
A04p09350 Brassica napus HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
BolSC28t60311H Brassica oleracea HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
BolSC28t60367H Brassica oleracea HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
BraSC159t45726Z Brassica rapa HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
BraSC48t46236Z Brassica rapa HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
CANSAT16G0002 Cannabis sativa HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
CARHR283530 Cardamine hirsuta HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
AUR62044038 Chenopodium quinoa HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
HanXRQChr04g0127221 Helianthus annuus HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
Nn1g10090 Nelumbo nucifera HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
SabraMtG0005600 Salix brachista HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
Sc08g0004810 Simmondsia chinensis HOM05D004537 ORTHO05D005492 1.4e-39 166.0 95 91.6
RcHm_v2.0_Chr6g0256731 Rosa chinensis HOM05D004537 ORTHO05D005492 1.8e-39 165.6 95 90.5
RcHm_v2.0_MTg0498791 Rosa chinensis HOM05D004537 ORTHO05D005492 1.8e-39 165.6 95 90.5
PGSC0003DMG400002971 Solanum tuberosum HOM05D004537 ORTHO05D005492 9.1e-39 163.3 89 94.4
Actinidia34915 Actinidia chinensis HOM05D004537 ORTHO05D005492 1.5e-38 162.5 86 96.5
BraSC48t46325Z Brassica rapa HOM05D004537 ORTHO05D005492 3.4e-38 161.4 96 90.6
Solyc11g063610.3 Solanum lycopersicum HOM05D004537 ORTHO05D005492 3.4e-38 161.4 89 93.3
CAN.G889.6 Capsicum annuum HOM05D004537 ORTHO05D005492 1.3e-37 159.5 91 90.1
Nitab4.5_0001127g0230 Nicotiana tabacum HOM05D004537 ORTHO05D005492 5.0e-37 157.5 91 89.0
Ah.00g237940 Amaranthus hybridus HOM05D004537 ORTHO05D005492 1.4e-34 149.4 85 90.6
Lalb_Chr00c21g0405801 Lupinus albus HOM05D004537 ORTHO05D005492 8.8e-34 146.7 77 94.8
ClCG04G003500 Citrullus lanatus HOM05D004537 ORTHO05D005492 2.4e-31 138.7 85 88.2
SEGI_28485 Sequoiadendron giganteum HOM05D004537 ORTHO05D005492 2.6e-30 135.2 95 78.9
LjContig00315g0010412 Lotus japonicus HOM05D004537 ORTHO05D005492 1.0e-29 133.3 70 94.3
MD13G1127000 Malus domestica HOM05D004537 ORTHO05D005492 1.6e-27 125.9 68 95.6
HanXRQChr04g0127251 Helianthus annuus HOM05D004537 ORTHO05D005492 1.4e-26 122.9 70 88.6
Medtr0024s0110 Medicago truncatula HOM05D004537 ORTHO05D005492 2.3e-26 122.1 64 92.2
Solyc02g021770.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 2.3e-26 122.1 68 91.2
Nitab4.5_0000866g0210 Nicotiana tabacum HOM05D004537 ORTHO05D005492 8.2e-24 113.6 89 73.0
Solyc08g029290.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.1e-20 103.2 76 69.7
SMO053G0009 Selaginella moellendorffii HOM05D004537 ORTHO05D005492 2.6e-17 92.0 74 64.9
HPP92_007209 Vanilla planifolia HOM05D004537 ORTHO05D005492 1.7e-16 89.4 46 93.5
Gorai.013G213100 Gossypium raimondii HOM05D004537 ORTHO05D005492 3.7e-16 88.2 95 58.9
CAN.G505.7 Capsicum annuum HOM05D004537 ORTHO05D005492 1.1e-15 86.7 91 58.2
Nitab4.5_0001234g0100 Nicotiana tabacum HOM05D004537 ORTHO05D005492 4.1e-15 84.7 56 82.1
PGR071G0006 Punica granatum HOM05D004537 ORTHO05D005492 7.0e-15 84.0 86 58.1
SHI35293 Sapria himalayana HOM05D004537 ORTHO05D005492 1.7e-13 79.3 86 57.0
Nitab4.5_0000592g0100 Nicotiana tabacum HOM05D004537 ORTHO05D005492 2.9e-13 78.6 84 57.1
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 2.8e-11 72.0 40 85.0
Haze_27145 Corylus avellana HOM05D004537 ORTHO05D005492 3.6e-11 71.6 95 41.1
Ah.10g027900 Amaranthus hybridus HOM05D004537 ORTHO05D005492 2.0e-09 65.9 40 80.0
Ah.10g028280 Amaranthus hybridus HOM05D004537 ORTHO05D005492 2.0e-09 65.9 40 80.0
Haze_27411 Corylus avellana HOM05D004537 ORTHO05D005492 1.8e-07 59.3 37 75.7
SHI27477 Sapria himalayana HOM05D004537 ORTHO05D005492 3.1e-07 58.5 38 73.7


User provided reference genes

Program Settings