Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 1.7e-94 349.4 180 100.0
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 5.1e-59 231.5 167 67.1
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 4.4e-50 201.8 160 62.5
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 4.8e-49 198.4 160 61.9
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 2.4e-48 196.1 163 58.9
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 2.4e-48 196.1 163 59.5
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 2.4e-48 196.1 160 60.0
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 3.1e-48 195.7 163 58.9
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 5.3e-48 194.9 163 58.9
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 5.3e-48 194.9 160 59.4
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 7.0e-48 194.5 163 58.3
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 7.0e-48 194.5 164 61.0
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 9.1e-48 194.1 161 59.0
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 1.0e-46 190.7 160 60.6
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 1.3e-46 190.3 158 60.8
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 1.7e-46 189.9 154 61.7
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 2.9e-46 189.1 156 59.0
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 5.0e-46 188.3 162 57.4
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 8.5e-46 187.6 160 57.5
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 1.1e-45 187.2 160 58.1
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 1.9e-45 186.4 154 58.4
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 2.5e-45 186.0 167 53.3
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 5.5e-45 184.9 160 58.8
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 5.5e-45 184.9 160 58.1
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 7.2e-45 184.5 160 58.8
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 9.4e-45 184.1 163 55.8
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 1.6e-44 183.3 157 62.4
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 2.1e-44 183.0 168 54.2
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 4.7e-44 181.8 160 59.4
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 4.7e-44 181.8 161 57.8
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 1.0e-43 180.6 161 57.8
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 1.8e-43 179.9 174 53.4
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 3.0e-43 179.1 175 53.7
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 3.0e-43 179.1 175 53.7
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 4.0e-43 178.7 163 57.1
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 4.0e-43 178.7 167 50.9
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 5.2e-43 178.3 174 52.9
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 3.3e-42 175.6 173 54.3
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 7.5e-42 174.5 167 51.5
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 9.7e-42 174.1 146 57.5
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 1.3e-41 173.7 167 51.5
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 4.8e-41 171.8 147 56.5
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 6.3e-41 171.4 146 57.5
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 6.3e-41 171.4 160 53.1
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 6.3e-41 171.4 143 60.1
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 8.2e-41 171.0 160 51.9
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 1.1e-40 170.6 162 53.1
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 5.3e-40 168.3 159 55.3
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 5.3e-40 168.3 190 45.3
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 1.2e-39 167.2 167 53.3
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 2.0e-39 166.4 137 58.4
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.0e-39 166.4 143 56.6
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 2.0e-39 166.4 158 53.8
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 2.7e-39 166.0 165 50.9
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 3.5e-39 165.6 151 52.3
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 4.5e-39 165.2 167 49.7
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 1.3e-38 163.7 160 50.6
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 1.3e-38 163.7 154 53.9
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 3.8e-38 162.2 164 50.0
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 8.5e-38 161.0 169 50.9
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 1.5e-37 160.2 171 48.5
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 3.2e-37 159.1 165 50.9
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 3.2e-37 159.1 159 52.2
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 4.2e-37 158.7 143 53.1
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 9.4e-37 157.5 143 53.1
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 1.2e-36 157.1 148 51.4
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 1.6e-36 156.8 158 51.3
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 2.1e-36 156.4 142 52.8
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 2.1e-36 156.4 165 50.3
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 1.4e-35 153.7 151 46.4
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 3.0e-35 152.5 137 56.9
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 6.8e-35 151.4 162 49.4
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 2.0e-34 149.8 173 46.2
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 3.4e-34 149.1 150 45.3
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 5.7e-34 148.3 173 45.1
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 5.7e-34 148.3 140 51.4
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 7.5e-34 147.9 153 46.4
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 1.7e-33 146.7 147 51.7
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 2.2e-33 146.4 164 42.7
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 4.8e-33 145.2 144 50.0
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 4.8e-33 145.2 156 46.2
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 6.3e-33 144.8 152 50.0
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 3.5e-31 139.0 115 61.7
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 5.9e-31 138.3 173 46.2
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 2.3e-30 136.3 164 46.3
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 1.5e-29 133.7 149 48.3
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 1.5e-29 133.7 149 48.3
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 2.5e-29 132.9 129 48.8
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 1.2e-28 130.6 146 48.6
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 3.6e-28 129.0 123 56.9
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 2.3e-27 126.3 117 53.0
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 5.7e-26 121.7 116 51.7
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 7.5e-26 121.3 125 45.6
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 9.8e-26 120.9 106 56.6
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.8e-25 119.4 142 45.8
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 3.1e-24 115.9 134 46.3
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 1.2e-23 114.0 129 44.2
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 4.3e-21 105.5 166 39.8
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 7.3e-21 104.8 101 52.5
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 1.2e-20 104.0 160 41.2
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 2.8e-20 102.8 99 54.5
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 1.4e-19 100.5 94 55.3
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 1.8e-19 100.1 94 55.3
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 2.3e-19 99.8 91 57.1
BolC7t46653H Brassica oleracea HOM05D002637 ORTHO05D009046 4.0e-19 99.0 141 44.7
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 2.6e-18 96.3 120 40.8
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 3.4e-18 95.9 172 36.0
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 7.5e-18 94.7 135 42.2
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 2.2e-17 93.2 83 55.4
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 3.7e-17 92.4 155 33.5
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 6.4e-17 91.7 85 54.1
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 5.4e-16 88.6 136 33.8
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 2.7e-15 86.3 155 32.3
A03p65120 Brassica napus HOM05D002637 ORTHO05D009046 3.5e-15 85.9 114 47.4
BraA03t15571Z Brassica rapa HOM05D002637 ORTHO05D009046 1.0e-14 84.3 109 48.6
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 5.0e-14 82.0 68 60.3
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 6.6e-14 81.6 128 33.6
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 1.2e-12 77.4 68 54.4
Prupe.2G128500 Prunus persica HOM05D000001 ORTHO05D009896 2.1e-12 76.6 81 51.9
Zm00001eb230930 Zea mays HOM05D002637 ORTHO05D009046 4.7e-12 75.5 143 31.5
EL10Ac1g02043 Beta vulgaris HOM05D002637 ORTHO05D009046 1.4e-11 73.9 110 37.3
Glyma.07G123500 Glycine max HOM05D005192 ORTHO05D006023 1.7e-06 57.0 124 30.6
VMungo0331G1938 Vigna mungo HOM05D005192 ORTHO05D006023 2.3e-06 56.6 122 28.7
Ciclev10032932m.g Citrus clementina HOM05D005192 ORTHO05D006023 6.6e-06 55.1 127 31.5
Glyma.03G098300 Glycine max HOM05D005192 ORTHO05D006023 6.6e-06 55.1 124 30.6
Lj3g0015892 Lotus japonicus HOM05D005192 ORTHO05D006023 6.6e-06 55.1 117 30.8
Atru.chr2.1677 Acer truncatum HOM05D005192 ORTHO05D006023 8.6e-06 54.7 137 29.9
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 8.6e-06 54.7 66 42.4
TPR.G17364 Trifolium pratense HOM05D005192 ORTHO05D006023 8.6e-06 54.7 120 27.5


User provided reference genes

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