Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01540 Eucalyptus grandis HOM05D007972 ORTHO05D010352 2.7e-50 201.8 110 100.0
Eucgr.E01542 Eucalyptus grandis HOM05D007972 ORTHO05D010352 3.7e-28 128.3 109 69.7
Eucgr.E01539 Eucalyptus grandis HOM05D007972 ORTHO05D010352 8.3e-28 127.1 104 69.2
Eucgr.E01544 Eucalyptus grandis HOM05D007972 ORTHO05D010352 3.2e-27 125.2 109 68.8
Prupe.2G122000 Prunus persica HOM05D007972 ORTHO05D010352 2.3e-17 92.4 112 50.9
QL04p029068 Quercus lobata HOM05D007972 ORTHO05D010352 4.3e-16 88.2 110 49.1
CANSAT25G1078 Cannabis sativa HOM05D007972 ORTHO05D010352 1.6e-15 86.3 113 46.0
CiPaw.13G024900 Carya illinoinensis HOM05D007972 ORTHO05D010352 6.9e-14 80.9 111 47.7
Cfa011053 Carpinus fangiana HOM05D007972 ORTHO05D010352 3.4e-13 78.6 113 46.9
RcHm_v2.0_Chr1g0346011 Rosa chinensis HOM05D007972 ORTHO05D010352 5.8e-13 77.8 109 45.0
TWI14G1321 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 1.7e-12 76.3 104 44.2
TAR636G0859 Trochodendron aralioides HOM05D007972 ORTHO05D010352 1.7e-12 76.3 112 42.9
Lalb_Chr01g0021721 Lupinus albus HOM05D007972 ORTHO05D010352 2.9e-12 75.5 109 44.0
Psat3g070000 Pisum sativum HOM05D007972 ORTHO05D010352 3.8e-12 75.1 111 44.1
Medtr7g092710 Medicago truncatula HOM05D007972 ORTHO05D010352 6.4e-12 74.3 109 43.1
MBI04_g13845_MAGBIO Magnolia biondii HOM05D007972 ORTHO05D010352 8.4e-12 73.9 112 42.0
MD07G1098000 Malus domestica HOM05D007972 ORTHO05D010352 1.4e-11 73.2 110 40.9
Medtr7g092700 Medicago truncatula HOM05D007972 ORTHO05D010352 3.2e-11 72.0 112 41.1
Ca_08498_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 5.4e-11 71.2 112 42.0
Ca_29723_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 5.4e-11 71.2 112 42.0
Sabra17G0017000 Salix brachista HOM05D007972 ORTHO05D010352 5.4e-11 71.2 107 41.1
Lj5g0008867 Lotus japonicus HOM05D007972 ORTHO05D010352 7.1e-11 70.9 110 40.9
Oeu037442.1 Olea europaea HOM05D007972 ORTHO05D010352 7.1e-11 70.9 105 43.8
Glyma.09G244400 Glycine max HOM05D007972 ORTHO05D010352 9.3e-11 70.5 115 37.4
TPR.G4718 Trifolium pratense HOM05D007972 ORTHO05D010352 1.2e-10 70.1 107 43.9
MD02G1218900 Malus domestica HOM05D007972 ORTHO05D010352 1.6e-10 69.7 114 39.5
Sabra17G0016900 Salix brachista HOM05D007972 ORTHO05D010352 1.6e-10 69.7 108 40.7
TPR.G28769 Trifolium pratense HOM05D007972 ORTHO05D010352 1.6e-10 69.7 107 42.1
RcHm_v2.0_Chr1g0346041 Rosa chinensis HOM05D007972 ORTHO05D010352 2.7e-10 68.9 107 43.9
Potri.017G027900 Populus trichocarpa HOM05D007972 ORTHO05D010352 3.5e-10 68.6 112 41.1
Glyma.18G249100 Glycine max HOM05D007972 ORTHO05D010352 6.0e-10 67.8 112 37.5
VMungo1383G2794 Vigna mungo HOM05D007972 ORTHO05D010352 6.0e-10 67.8 114 42.1
Peaxi162Scf00853g00034 Petunia axillaris HOM05D007972 ORTHO05D010352 1.7e-09 66.2 114 38.6
Lj1g0012968 Lotus japonicus HOM05D007972 ORTHO05D010352 3.0e-09 65.5 111 41.4
Nn1g00786 Nelumbo nucifera HOM05D007972 ORTHO05D010352 3.0e-09 65.5 109 39.4
Nitab4.5_0000563g0210 Nicotiana tabacum HOM05D007972 ORTHO05D010352 3.0e-09 65.5 114 36.8
Glyma.09G244600 Glycine max HOM05D007972 ORTHO05D010352 5.1e-09 64.7 112 39.3
Manes.04G044100 Manihot esculenta HOM05D007972 ORTHO05D010352 6.6e-09 64.3 115 39.1
Migut.B01509 Erythranthe guttata HOM05D007972 ORTHO05D010352 8.7e-09 63.9 106 38.7
TWI59G1165 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 8.7e-09 63.9 105 41.0
Medtr7g081655 Medicago truncatula HOM05D007972 ORTHO05D010352 1.1e-08 63.5 102 38.2
AUR62041847 Chenopodium quinoa HOM05D007972 ORTHO05D010352 1.5e-08 63.2 116 39.7
AUR62032352 Chenopodium quinoa HOM05D007972 ORTHO05D010352 1.9e-08 62.8 115 37.4
VMungo1383G2083 Vigna mungo HOM05D007972 ORTHO05D010352 1.9e-08 62.8 112 37.5
Glyma.18G248700 Glycine max HOM05D007972 ORTHO05D010352 2.5e-08 62.4 94 41.5
Manes.11G122500 Manihot esculenta HOM05D007972 ORTHO05D010352 3.3e-08 62.0 93 43.0
Psat3g099040 Pisum sativum HOM05D007972 ORTHO05D010352 4.3e-08 61.6 102 40.2
Nitab4.5_0004837g0020 Nicotiana tabacum HOM05D007972 ORTHO05D010352 1.3e-07 60.1 114 37.7
CAN.G1585.6 Capsicum annuum HOM05D007972 ORTHO05D010352 1.6e-07 59.7 86 44.2
TPR.G14096 Trifolium pratense HOM05D007972 ORTHO05D010352 1.6e-07 59.7 111 35.1
Phvul.008G048700 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 4.8e-07 58.2 96 42.7
Solyc01g089890.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 2.4e-06 55.8 109 35.8


User provided reference genes

Program Settings