Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01497 Eucalyptus grandis HOM05D003858 ORTHO05D005878 6.9e-285 983.4 541 100.0
PGR004G1062 Punica granatum HOM05D003858 ORTHO05D005878 1.6e-212 743.0 539 75.5
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 2.7e-212 742.3 524 77.7
COL.COLO4_28121 Corchorus olitorius HOM05D003858 ORTHO05D005878 7.6e-207 724.2 527 75.3
Gorai.003G120600 Gossypium raimondii HOM05D003858 ORTHO05D005878 1.3e-206 723.4 535 74.6
Duzib205G0757 Durio zibethinus HOM05D003858 ORTHO05D005878 1.3e-203 713.4 503 74.6
Thecc.03G129000 Theobroma cacao HOM05D003858 ORTHO05D005878 5.1e-203 711.4 537 72.6
Gohir.D03G114300 Gossypium hirsutum HOM05D003858 ORTHO05D005878 2.5e-202 709.1 535 71.8
arahy.Tifrunner.gnm1.ann1.L81EPG Arachis hypogaea HOM05D003858 ORTHO05D005878 3.3e-202 708.8 552 75.0
Gohir.A03G052800 Gossypium hirsutum HOM05D003858 ORTHO05D005878 3.3e-202 708.8 537 72.1
Actinidia08869 Actinidia chinensis HOM05D003858 ORTHO05D005878 3.6e-201 705.3 438 80.1
MELO3C002182.2 Cucumis melo HOM05D003858 ORTHO05D005878 1.4e-200 703.4 527 72.7
Manes.06G119400 Manihot esculenta HOM05D003858 ORTHO05D005878 5.3e-200 701.4 555 71.5
Dinv23145 Davidia involucrata HOM05D003858 ORTHO05D005878 1.2e-199 700.3 561 72.2
TAR371G0204 Trochodendron aralioides HOM05D003858 ORTHO05D005878 4.5e-199 698.4 533 70.9
Sed0027713 Sechium edule HOM05D003858 ORTHO05D005878 2.9e-198 695.7 526 71.7
Rhsim12G0174400 Rhododendron simsii HOM05D003858 ORTHO05D005878 8.4e-198 694.1 505 73.5
Rhsim10G0051500 Rhododendron simsii HOM05D003858 ORTHO05D005878 1.1e-197 693.7 472 75.2
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 5.5e-197 691.4 530 73.6
vmacro16677 Vaccinium macrocarpon HOM05D003858 ORTHO05D005878 9.3e-197 690.6 472 74.6
Cfa015653 Carpinus fangiana HOM05D003858 ORTHO05D005878 1.6e-196 689.9 520 70.2
arahy.Tifrunner.gnm1.ann1.LEEI49 Arachis hypogaea HOM05D003858 ORTHO05D005878 2.1e-196 689.5 530 74.3
Hund02439 Selenicereus undatus HOM05D003858 ORTHO05D005878 2.1e-196 689.5 529 73.5
Haze_09759 Corylus avellana HOM05D003858 ORTHO05D005878 2.7e-196 689.1 558 67.4
CiPaw.15G056500 Carya illinoinensis HOM05D003858 ORTHO05D005878 3.5e-196 688.7 526 71.7
CiPaw.12G042900 Carya illinoinensis HOM05D003858 ORTHO05D005878 4.6e-196 688.3 525 71.4
Cc10_g13400 Coffea canephora HOM05D003858 ORTHO05D005878 6.0e-196 688.0 530 70.8
CANSAT80G0729 Cannabis sativa HOM05D003858 ORTHO05D005878 7.9e-196 687.6 518 73.7
Atru.chr9.1128 Acer truncatum HOM05D003858 ORTHO05D005878 1.0e-195 687.2 541 69.9
Cpa.g.sc250.13 Carica papaya HOM05D003858 ORTHO05D005878 1.8e-195 686.4 540 71.5
Nn4g22329 Nelumbo nucifera HOM05D003858 ORTHO05D005878 1.8e-195 686.4 532 70.5
TWI23G0194 Tripterygium wilfordii HOM05D003858 ORTHO05D005878 1.8e-195 686.4 533 69.0
CSS0032323 Camellia sinensis var. sinensis HOM05D003858 ORTHO05D005878 1.9e-194 682.9 567 68.1
CsaV3_1G007630 Cucumis sativus L. HOM05D003858 ORTHO05D005878 5.6e-194 681.4 452 76.1
Potri.015G096100 Populus trichocarpa HOM05D003858 ORTHO05D005878 1.3e-193 680.2 556 70.9
Nitab4.5_0005642g0040 Nicotiana tabacum HOM05D003858 ORTHO05D005878 3.7e-193 678.7 430 78.4
FAN08G1590 Fragaria x ananassa HOM05D003858 ORTHO05D005878 4.8e-193 678.3 525 72.8
Sabra15G0116900 Salix brachista HOM05D003858 ORTHO05D005878 6.2e-193 677.9 529 71.5
Lj5C96T4 Lonicera japonica HOM05D003858 ORTHO05D005878 1.1e-192 677.2 520 71.0
Peaxi162Scf00119g00520 Petunia axillaris HOM05D003858 ORTHO05D005878 2.4e-192 676.0 455 76.7
DCAR_001872 Daucus carota HOM05D003858 ORTHO05D005878 4.0e-192 675.2 531 69.1
Nitab4.5_0006042g0010 Nicotiana tabacum HOM05D003858 ORTHO05D005878 2.0e-191 672.9 430 77.7
HanXRQChr02g0034711 Helianthus annuus HOM05D003858 ORTHO05D005878 4.5e-191 671.8 529 72.0
Oeu001550.1 Olea europaea HOM05D003858 ORTHO05D005878 5.8e-191 671.4 546 71.6
SGA_v2.0_scaffold28G11963 Striga asiatica HOM05D003858 ORTHO05D005878 1.3e-190 670.2 546 71.4
Ah.01g020640 Amaranthus hybridus HOM05D003858 ORTHO05D005878 2.2e-190 669.5 541 70.6
FvH4_5g08310 Fragaria vesca HOM05D003858 ORTHO05D005878 6.5e-190 667.9 525 71.8
Solyc08g080850.4 Solanum lycopersicum HOM05D003858 ORTHO05D005878 6.5e-190 667.9 424 78.8
Aqoxy3G00800 Aquilegia oxysepala HOM05D003858 ORTHO05D005878 8.4e-190 667.5 538 67.8
SGA_v2.0_scaffold2G01192 Striga asiatica HOM05D003858 ORTHO05D005878 1.4e-189 666.8 550 69.5
Glyma.09G261800 Glycine max HOM05D003858 ORTHO05D005878 2.5e-189 666.0 534 72.5
Lalb_Chr01g0021111 Lupinus albus HOM05D003858 ORTHO05D005878 2.5e-189 666.0 522 70.9
SalBow6G4120 Salvia bowleyana HOM05D003858 ORTHO05D005878 3.2e-189 665.6 528 70.5
ECA247G4076 Erigeron canadensis HOM05D003858 ORTHO05D005878 7.1e-189 664.5 545 69.9
Glyma.18G230300 Glycine max HOM05D003858 ORTHO05D005878 7.1e-189 664.5 444 77.5
MD14G1157300 Malus domestica HOM05D003858 ORTHO05D005878 1.6e-188 663.3 520 71.0
CAN.G774.2 Capsicum annuum HOM05D003858 ORTHO05D005878 2.1e-188 662.9 472 72.5
RcHm_v2.0_Chr7g0190211 Rosa chinensis HOM05D003858 ORTHO05D005878 2.7e-188 662.5 527 72.7
Lsat_1_v5_gn_1_28960 Lactuca sativa HOM05D003858 ORTHO05D005878 3.5e-188 662.1 417 79.4
Sc10g0010460 Simmondsia chinensis HOM05D003858 ORTHO05D005878 3.5e-188 662.1 524 72.9
Sopen08g029150 Solanum pennellii HOM05D003858 ORTHO05D005878 3.5e-188 662.1 449 75.3
CDE05G2345 Ceratophyllum demersum HOM05D003858 ORTHO05D005878 3.0e-187 659.1 515 67.4
Haze_07135 Corylus avellana HOM05D003858 ORTHO05D005878 6.7e-187 657.9 528 67.4
Prupe.5G151200 Prunus persica HOM05D003858 ORTHO05D005878 7.4e-186 654.4 529 70.3
Hma1.2p1_0014F.1_g009460 Hydrangea macrophylla HOM05D003858 ORTHO05D005878 2.1e-185 652.9 549 68.3
Migut.N03254 Erythranthe guttata HOM05D003858 ORTHO05D005878 3.7e-185 652.1 438 74.7
THA.LOC104800505 Tarenaya hassleriana HOM05D003858 ORTHO05D005878 4.8e-185 651.7 518 71.4
AUR62028258 Chenopodium quinoa HOM05D003858 ORTHO05D005878 6.3e-185 651.4 436 75.7
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 8.2e-185 651.0 459 71.9
PGSC0003DMG400012349 Solanum tuberosum HOM05D003858 ORTHO05D005878 8.2e-185 651.0 520 70.4
Lj1g0027711 Lotus japonicus HOM05D003858 ORTHO05D005878 1.8e-184 649.8 548 70.1
DCAR_021618 Daucus carota HOM05D003858 ORTHO05D005878 5.3e-184 648.3 538 64.7
PSO017G3328 Papaver somniferum HOM05D003858 ORTHO05D005878 9.0e-184 647.5 498 69.9
QL10p002959 Quercus lobata HOM05D003858 ORTHO05D005878 9.0e-184 647.5 524 68.3
Phvul.008G067600 Phaseolus vulgaris HOM05D003858 ORTHO05D005878 4.2e-181 638.6 525 71.2
BcaC02g08384 Brassica carinata HOM05D003858 ORTHO05D005878 5.1e-179 631.7 422 75.8
C04p54940 Brassica napus HOM05D003858 ORTHO05D005878 5.1e-179 631.7 422 75.8
Aa31sc86G50 Aethionema arabicum HOM05D003858 ORTHO05D005878 8.7e-179 630.9 433 73.4
TPR.G2433 Trifolium pratense HOM05D003858 ORTHO05D005878 1.1e-178 630.6 534 65.7
VMungo1383G3568 Vigna mungo HOM05D003858 ORTHO05D005878 3.3e-178 629.0 446 73.5
EL10Ac9g21903 Beta vulgaris HOM05D003858 ORTHO05D005878 7.4e-178 627.9 446 74.7
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 4.8e-177 625.2 481 71.3
BcaB06g28028 Brassica carinata HOM05D003858 ORTHO05D005878 4.8e-177 625.2 422 75.1
A04p19370 Brassica napus HOM05D003858 ORTHO05D005878 4.8e-177 625.2 513 70.2
AT5G37350 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 1.1e-176 624.0 528 68.6
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 2.4e-176 622.9 512 67.4
Thhalv10000120m.g Eutrema salsugineum HOM05D003858 ORTHO05D005878 5.3e-176 621.7 422 74.2
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 2.6e-175 619.4 512 66.2
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 4.5e-175 618.6 513 69.2
BraA04t17533Z Brassica rapa HOM05D003858 ORTHO05D005878 5.9e-175 618.2 512 68.9
Medtr7g090710 Medicago truncatula HOM05D003858 ORTHO05D005878 2.5e-173 612.8 557 67.0
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 3.2e-173 612.5 512 67.8
RcHm_v2.0_Chr5g0020401 Rosa chinensis HOM05D003858 ORTHO05D005878 4.6e-172 608.6 510 64.9
BolC4t27030H Brassica oleracea HOM05D003858 ORTHO05D005878 3.9e-171 605.5 512 69.1
FAN18G4532 Fragaria x ananassa HOM05D003858 ORTHO05D005878 6.3e-169 598.2 527 67.2
VMungo1383G2243 Vigna mungo HOM05D003858 ORTHO05D005878 1.1e-168 597.4 527 64.3
SalBow7G4372 Salvia bowleyana HOM05D003858 ORTHO05D005878 1.4e-168 597.0 547 64.5
FAN04G1110 Fragaria x ananassa HOM05D003858 ORTHO05D005878 3.1e-168 595.9 527 67.0
SEGI_19941 Sequoiadendron giganteum HOM05D003858 ORTHO05D005878 1.2e-164 583.9 445 66.3
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 1.6e-164 583.6 481 68.6
Aa31LG8G17300 Aethionema arabicum HOM05D003858 ORTHO05D005878 6.1e-164 581.6 512 66.2
ClCG01G014690 Citrullus lanatus HOM05D003858 ORTHO05D005878 5.2e-163 578.6 527 63.6
AUR62003032 Chenopodium quinoa HOM05D003858 ORTHO05D005878 2.4e-160 569.7 361 78.9
Zm00001eb103140 Zea mays HOM05D003858 ORTHO05D005878 7.0e-160 568.2 533 60.2
ATR0559G302 Amborella trichopoda HOM05D003858 ORTHO05D005878 9.1e-160 567.8 531 59.5
Psat3g110800 Pisum sativum HOM05D003858 ORTHO05D005878 1.2e-159 567.4 530 62.3
Zm00001eb256840 Zea mays HOM05D003858 ORTHO05D005878 1.3e-158 563.9 533 59.8
unitig_21.g20184 Utricularia gibba HOM05D003858 ORTHO05D005878 4.2e-157 558.9 523 62.3
PSO170G6136 Papaver somniferum HOM05D003858 ORTHO05D005878 7.2e-157 558.1 520 61.2
HPP92_020969 Vanilla planifolia HOM05D003858 ORTHO05D005878 3.6e-156 555.8 554 58.7
AUR62007839 Chenopodium quinoa HOM05D003858 ORTHO05D005878 8.0e-156 554.7 396 72.2
FvH4_5g16770 Fragaria vesca HOM05D003858 ORTHO05D005878 8.0e-156 554.7 502 62.4
MBI07_g31017_MAGBIO Magnolia biondii HOM05D003858 ORTHO05D005878 2.6e-154 549.7 481 67.6
Os07g0162300 Oryza sativa ssp. japonica HOM05D003858 ORTHO05D005878 2.2e-153 546.6 497 60.4
FAN16G2509 Fragaria x ananassa HOM05D003858 ORTHO05D005878 4.8e-153 545.4 502 61.0
TAR629G0830 Trochodendron aralioides HOM05D003858 ORTHO05D005878 7.7e-151 538.1 353 77.3
TPR.G23280 Trifolium pratense HOM05D003858 ORTHO05D005878 2.2e-150 536.6 418 70.6
Mapoly0084s0039 Marchantia polymorpha HOM05D003858 ORTHO05D005878 8.0e-148 528.1 429 62.5
Ca_07893_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 2.6e-146 523.1 386 71.0
FAN20G1682 Fragaria x ananassa HOM05D003858 ORTHO05D005878 2.3e-142 510.0 517 57.3
SMO117G0291 Selaginella moellendorffii HOM05D003858 ORTHO05D005878 1.6e-140 503.8 404 63.1
MD06G1142000 Malus domestica HOM05D003858 ORTHO05D005878 1.4e-128 464.2 515 57.3
Medtr7g076710 Medicago truncatula HOM05D003858 ORTHO05D005878 7.0e-128 461.8 391 63.2
Lj7A11G39 Lonicera japonica HOM05D003858 ORTHO05D005878 2.0e-127 460.3 505 52.7
Pp3c21_1450 Physcomitrium patens HOM05D003858 ORTHO05D005878 3.3e-125 453.0 372 62.1
AagrBONN_evm.TU.Sc2ySwM_228.678 Anthoceros agrestis HOM05D003858 ORTHO05D005878 2.3e-123 446.8 403 55.8
Lj7A12G16 Lonicera japonica HOM05D003858 ORTHO05D005878 4.0e-123 446.0 458 53.9
PSO724G1315 Papaver somniferum HOM05D003858 ORTHO05D005878 5.2e-123 445.7 486 54.7
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 1.1e-120 438.0 485 54.4
Cre13.g580900 Chlamydomonas reinhardtii HOM05D003858 ORTHO05D005878 1.2e-119 434.5 456 51.3
Medtr7g012400 Medicago truncatula HOM05D003858 ORTHO05D005878 6.6e-118 428.7 503 54.5
TPR.G21069 Trifolium pratense HOM05D003858 ORTHO05D005878 1.5e-117 427.6 563 52.2
PSO724G0964 Papaver somniferum HOM05D003858 ORTHO05D005878 1.2e-116 424.5 404 58.9
PSO170G3101 Papaver somniferum HOM05D003858 ORTHO05D005878 6.2e-116 422.2 482 53.1
PSO724G1140 Papaver somniferum HOM05D003858 ORTHO05D005878 1.1e-115 421.4 409 58.4
PRCOL_00003781 Prasinoderma coloniale HOM05D003858 ORTHO05D005878 2.1e-111 407.1 426 51.6
SHI21468 Sapria himalayana HOM05D003858 ORTHO05D005878 3.3e-109 399.8 708 39.3
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 1.5e-101 374.4 346 56.6
RcHm_v2.0_Chr5g0063291 Rosa chinensis HOM05D003858 ORTHO05D005878 6.9e-99 365.5 530 46.4
Ca_28300_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 1.2e-95 354.8 371 57.4
RcHm_v2.0_Chr5g0063241 Rosa chinensis HOM05D003858 ORTHO05D005878 6.0e-95 352.4 444 48.4
PSO063G1302 Papaver somniferum HOM05D003858 ORTHO05D005878 4.0e-91 339.7 283 64.0
SHI21367 Sapria himalayana HOM05D003858 ORTHO05D005878 4.5e-90 336.3 453 44.2
Zm00001eb256780 Zea mays HOM05D003858 ORTHO05D005878 4.5e-90 336.3 244 71.3
CBR_g61467 Chara braunii HOM05D003858 ORTHO05D005878 1.4e-88 331.3 295 59.3
DCAR_029022 Daucus carota HOM05D003858 ORTHO05D005878 3.5e-87 326.6 486 44.4
CDE05G1919 Ceratophyllum demersum HOM05D003858 ORTHO05D015239 5.1e-86 322.8 280 64.6
arahy.Tifrunner.gnm1.ann1.RIH0QL Arachis hypogaea HOM05D003858 ORTHO05D015239 2.7e-79 300.4 266 72.9
Haze_27048 Corylus avellana HOM05D003858 ORTHO05D005878 5.6e-77 292.7 496 41.1
Cfa023770 Carpinus fangiana HOM05D003858 ORTHO05D005878 2.9e-73 280.4 346 46.5
Actinidia36803 Actinidia chinensis HOM05D003858 ORTHO05D015239 1.4e-67 261.5 168 78.0
PSO421G0376 Papaver somniferum HOM05D003858 ORTHO05D015239 4.2e-64 250.0 351 47.0
Actinidia36804 Actinidia chinensis HOM05D003858 ORTHO05D005878 1.1e-45 188.7 283 44.5
Cc10_g13370 Coffea canephora HOM05D003858 ORTHO05D015239 1.0e-38 165.6 96 79.2
FAN08G1067 Fragaria x ananassa HOM05D003858 ORTHO05D015239 7.0e-35 152.9 265 42.6
FAN13G2455 Fragaria x ananassa HOM05D003858 ORTHO05D015239 1.5e-29 135.2 105 62.9
Zm00001eb256800 Zea mays HOM05D003858 ORTHO05D033539 5.0e-25 120.2 119 56.3
Medtr6g024025 Medicago truncatula HOM05D003858 ORTHO05D267118 4.2e-24 117.1 106 58.5
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.0e-22 112.5 93 66.7
FAN21G1362 Fragaria x ananassa HOM05D003858 ORTHO05D207154 6.8e-22 109.8 252 34.5
PSO675G5360 Papaver somniferum HOM05D003858 ORTHO05D015239 5.7e-21 106.7 208 39.4
FvH4_3g12461 Fragaria vesca HOM05D000004 ORTHO05D000002 6.3e-20 103.2 148 43.9
BolC8t51470H Brassica oleracea HOM05D003858 ORTHO05D015239 3.1e-19 100.9 122 48.4
FAN08G1033 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.2e-18 99.0 71 67.6
CBR_g61468 Chara braunii HOM05D003858 ORTHO05D131775 1.5e-16 92.0 154 40.9
TAR625G0709 Trochodendron aralioides HOM05D003858 ORTHO05D015239 2.5e-16 91.3 45 91.1
C08p38970 Brassica napus HOM05D003858 ORTHO05D033539 3.3e-16 90.9 116 45.7
FvH4_5g25261 Fragaria vesca HOM05D003858 ORTHO05D015239 2.1e-15 88.2 73 60.3
HanXRQChr13g0426321 Helianthus annuus HOM05D003858 ORTHO05D000008 4.7e-15 87.0 75 53.3
BolC8t51471H Brassica oleracea HOM05D003858 ORTHO05D033539 1.0e-14 85.9 116 44.8
COL.COLO4_09285 Corchorus olitorius HOM05D003858 ORTHO05D155188 1.0e-14 85.9 46 87.0
FAN13G0915 Fragaria x ananassa HOM05D003858 ORTHO05D204259 2.6e-13 81.3 123 48.0
Zm00001eb256810 Zea mays HOM05D003858 ORTHO05D005878 5.8e-13 80.1 146 34.9
ECA247G3834 Erigeron canadensis HOM05D000031 ORTHO05D000030 3.9e-09 67.4 94 40.4
DCAR_007996 Daucus carota HOM05D003858 ORTHO05D176634 5.0e-09 67.0 127 33.9
ECA247G3860 Erigeron canadensis HOM05D000031 ORTHO05D000030 6.6e-09 66.6 102 40.2
BcaC07g40899 Brassica carinata HOM05D003858 ORTHO05D015239 1.1e-08 65.9 122 37.7
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 5.6e-08 63.5 199 25.6
Nitab4.5_0002844g0040 Nicotiana tabacum HOM05D004480 ORTHO05D005546 2.8e-07 61.2 210 25.7
CiPaw.05G188800 Carya illinoinensis HOM05D003858 ORTHO05D127864 6.2e-07 60.1 29 93.1
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 6.8e-06 56.6 202 23.3


User provided reference genes

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