Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01441 Eucalyptus grandis HOM05D005657 ORTHO05D007104 2.3e-179 632.1 323 100.0
PGR031G0971 Punica granatum HOM05D005657 ORTHO05D007104 8.5e-129 464.2 323 71.2
Cfa000932 Carpinus fangiana HOM05D005657 ORTHO05D007104 7.9e-127 457.6 323 70.0
ClCG01G024690 Citrullus lanatus HOM05D005657 ORTHO05D007104 6.7e-126 454.5 323 67.5
SalBow8G0891 Salvia bowleyana HOM05D005657 ORTHO05D007104 9.7e-125 450.7 321 66.7
Gohir.A05G147800 Gossypium hirsutum HOM05D005657 ORTHO05D007104 2.2e-124 449.5 321 67.3
Gorai.009G154400 Gossypium raimondii HOM05D005657 ORTHO05D007104 1.8e-123 446.4 321 66.7
Gohir.D05G150300 Gossypium hirsutum HOM05D005657 ORTHO05D007104 2.4e-123 446.0 321 66.4
Actinidia39582 Actinidia chinensis HOM05D005657 ORTHO05D007104 2.6e-122 442.6 323 66.6
Haze_05617 Corylus avellana HOM05D005657 ORTHO05D007104 1.0e-121 440.7 356 66.0
Hma1.2p1_0020F.1_g014110 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 1.0e-121 440.7 323 66.9
Thecc.06G148800 Theobroma cacao HOM05D005657 ORTHO05D007104 5.0e-121 438.3 323 65.9
TWI53G0207 Tripterygium wilfordii HOM05D005657 ORTHO05D007104 5.0e-121 438.3 322 66.5
GSVIVG01021513001 Vitis vinifera HOM05D005657 ORTHO05D007104 4.2e-120 435.3 324 66.0
MD05G1282500 Malus domestica HOM05D005657 ORTHO05D007104 9.4e-120 434.1 321 68.8
CiPaw.09G122400 Carya illinoinensis HOM05D005657 ORTHO05D007104 1.2e-119 433.7 323 65.6
FAN16G0196 Fragaria x ananassa HOM05D005657 ORTHO05D007104 4.6e-119 431.8 323 67.8
Lalb_Chr18g0055371 Lupinus albus HOM05D005657 ORTHO05D007104 1.0e-118 430.6 325 64.0
FAN21G3134 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.8e-118 429.9 323 67.5
MELO3C007126.2 Cucumis melo HOM05D005657 ORTHO05D007104 3.9e-118 428.7 331 64.0
FvH4_3g05380 Fragaria vesca HOM05D005657 ORTHO05D007104 5.1e-118 428.3 323 67.5
Ciclev10015992m.g Citrus clementina HOM05D005657 ORTHO05D007104 8.8e-118 427.6 321 66.7
RcHm_v2.0_Chr5g0014371 Rosa chinensis HOM05D005657 ORTHO05D007104 1.1e-117 427.2 321 67.6
CsaV3_6G051800 Cucumis sativus L. HOM05D005657 ORTHO05D007104 1.5e-117 426.8 324 64.5
TAR626G1592 Trochodendron aralioides HOM05D005657 ORTHO05D007104 2.0e-117 426.4 326 63.8
arahy.Tifrunner.gnm1.ann1.1GZ3A6 Arachis hypogaea HOM05D005657 ORTHO05D007104 4.4e-117 425.2 323 64.1
Glyma.13G219000 Glycine max HOM05D005657 ORTHO05D007104 4.4e-117 425.2 324 64.8
Duzib192G0691 Durio zibethinus HOM05D005657 ORTHO05D007104 5.7e-117 424.9 339 61.9
QL05p057428 Quercus lobata HOM05D005657 ORTHO05D007104 7.4e-117 424.5 328 65.2
VMungo0540G0312 Vigna mungo HOM05D005657 ORTHO05D007104 7.4e-117 424.5 323 64.4
arahy.Tifrunner.gnm1.ann1.PL5EIV Arachis hypogaea HOM05D005657 ORTHO05D007104 9.7e-117 424.1 323 64.4
CANSAT35G1510 Cannabis sativa HOM05D005657 ORTHO05D007104 3.7e-116 422.2 334 65.0
Prupe.4G082300 Prunus persica HOM05D005657 ORTHO05D007104 6.3e-116 421.4 324 66.4
Lj6g0016438 Lotus japonicus HOM05D005657 ORTHO05D007104 1.1e-115 420.6 323 63.2
MSTRG.16252 Avicennia marina HOM05D005657 ORTHO05D007104 2.4e-115 419.5 323 64.1
Psat1g188200 Pisum sativum HOM05D005657 ORTHO05D007104 2.4e-115 419.5 324 64.5
Ca_00535_v3 Cicer arietinum L. HOM05D005657 ORTHO05D007104 6.9e-115 417.9 323 64.1
Oeu042460.1 Olea europaea HOM05D005657 ORTHO05D007104 3.4e-114 415.6 322 63.7
A08p24690 Brassica napus HOM05D005657 ORTHO05D007104 1.3e-113 413.7 324 64.2
CSS0046586 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 2.9e-113 412.5 321 62.6
Aa31LG6G5550 Aethionema arabicum HOM05D005657 ORTHO05D007104 5.0e-113 411.8 323 63.8
CARHR029280 Cardamine hirsuta HOM05D005657 ORTHO05D007104 1.1e-112 410.6 324 63.6
Thhalv10008271m.g Eutrema salsugineum HOM05D005657 ORTHO05D007104 1.1e-112 410.6 324 63.6
BraA08t34424Z Brassica rapa HOM05D005657 ORTHO05D007104 1.4e-112 410.2 324 63.9
AT1G30130 Arabidopsis thaliana HOM05D005657 ORTHO05D007104 1.9e-112 409.8 324 63.3
CSS0036233 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 2.5e-112 409.5 321 62.6
Manes.17G071500 Manihot esculenta HOM05D005657 ORTHO05D007104 3.2e-112 409.1 326 63.5
Medtr2g019220 Medicago truncatula HOM05D005657 ORTHO05D007104 7.2e-112 407.9 324 62.0
Sed0002032 Sechium edule HOM05D005657 ORTHO05D007104 1.6e-111 406.8 323 61.9
Nitab4.5_0000484g0050 Nicotiana tabacum HOM05D005657 ORTHO05D007104 2.1e-111 406.4 321 62.3
BcaC01g00157 Brassica carinata HOM05D005657 ORTHO05D007104 4.7e-111 405.2 324 63.3
C03p76410 Brassica napus HOM05D005657 ORTHO05D007104 4.7e-111 405.2 324 63.3
Potri.011G084000 Populus trichocarpa HOM05D005657 ORTHO05D007104 4.7e-111 405.2 321 64.8
BcaB03g12197 Brassica carinata HOM05D005657 ORTHO05D007104 6.1e-111 404.8 331 61.6
Sopen05g032420 Solanum pennellii HOM05D005657 ORTHO05D007104 1.0e-110 404.1 321 62.3
BolC3t19896H Brassica oleracea HOM05D005657 ORTHO05D007104 1.4e-110 403.7 331 61.3
HanXRQChr16g0525711 Helianthus annuus HOM05D005657 ORTHO05D007104 1.8e-110 403.3 321 61.7
Sp1g25990 Schrenkiella parvula HOM05D005657 ORTHO05D007104 2.3e-110 402.9 325 61.8
Solyc05g053950.4 Solanum lycopersicum HOM05D005657 ORTHO05D007104 3.0e-110 402.5 321 62.0
Cc07_g20130 Coffea canephora HOM05D005657 ORTHO05D007104 6.7e-110 401.4 321 60.4
PGSC0003DMG401013075 Solanum tuberosum HOM05D005657 ORTHO05D007104 1.1e-109 400.6 321 61.7
CAN.G1744.1 Capsicum annuum HOM05D005657 ORTHO05D007104 2.0e-109 399.8 324 62.0
Sabra11G0066600 Salix brachista HOM05D005657 ORTHO05D007104 7.4e-109 397.9 321 62.6
FAN25G2659 Fragaria x ananassa HOM05D005657 ORTHO05D007104 2.8e-108 396.0 279 71.7
Carub.0001s2836 Capsella rubella HOM05D005657 ORTHO05D007104 3.7e-108 395.6 324 61.4
DCAR_007885 Daucus carota HOM05D005657 ORTHO05D007104 8.2e-108 394.4 323 61.0
vmacro10957 Vaccinium macrocarpon HOM05D005657 ORTHO05D007104 4.1e-107 392.1 374 54.8
EL10Ac8g19662 Beta vulgaris HOM05D005657 ORTHO05D007104 2.0e-106 389.8 328 60.1
Nn4g26588 Nelumbo nucifera HOM05D005657 ORTHO05D007104 3.5e-106 389.0 327 59.9
Lsat_1_v5_gn_4_29400 Lactuca sativa HOM05D005657 ORTHO05D007104 4.5e-106 388.7 325 61.5
Sc24g0001740 Simmondsia chinensis HOM05D005657 ORTHO05D007104 5.0e-105 385.2 323 60.7
Aqoxy1G01688 Aquilegia oxysepala HOM05D005657 ORTHO05D007104 1.1e-104 384.0 331 58.6
Ah.09g232540 Amaranthus hybridus HOM05D005657 ORTHO05D007104 2.7e-103 379.4 329 59.9
THA.LOC104812673 Tarenaya hassleriana HOM05D005657 ORTHO05D007104 2.7e-103 379.4 330 59.1
TPR.G26242 Trifolium pratense HOM05D005657 ORTHO05D007104 3.0e-102 375.9 275 64.4
MBI18_g24473_MAGBIO Magnolia biondii HOM05D005657 ORTHO05D007104 1.2e-101 374.0 323 59.1
TPR.G26236 Trifolium pratense HOM05D005657 ORTHO05D007104 2.6e-101 372.9 320 56.9
ECA234G1983 Erigeron canadensis HOM05D005657 ORTHO05D007104 4.4e-101 372.1 321 58.3
PSO339G2615 Papaver somniferum HOM05D005657 ORTHO05D007104 3.7e-100 369.0 328 57.9
Zm00001eb300160 Zea mays HOM05D005657 ORTHO05D007104 2.7e-98 362.8 335 58.2
PSO384G4094 Papaver somniferum HOM05D005657 ORTHO05D007104 1.3e-97 360.5 328 57.3
Dinv30768 Davidia involucrata HOM05D005657 ORTHO05D007104 9.4e-96 354.4 245 72.2
Peaxi162Scf00394g00119 Petunia axillaris HOM05D005657 ORTHO05D007104 4.0e-94 349.0 260 65.8
ATR1098G050 Amborella trichopoda HOM05D005657 ORTHO05D007104 5.2e-94 348.6 333 55.0
AUR62002729 Chenopodium quinoa HOM05D005657 ORTHO05D007104 5.2e-94 348.6 224 71.9
FAN11G2536 Fragaria x ananassa HOM05D005657 ORTHO05D007104 7.5e-93 344.7 323 57.9
SEGI_34988 Sequoiadendron giganteum HOM05D005657 ORTHO05D007104 6.3e-92 341.7 334 53.3
Migut.D01761 Erythranthe guttata HOM05D005657 ORTHO05D007104 1.4e-91 340.5 244 68.9
Phvul.006G165700 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 1.4e-91 340.5 323 55.4
Rhsim02G0159200 Rhododendron simsii HOM05D005657 ORTHO05D007104 2.4e-91 339.7 327 54.7
HPP92_012186 Vanilla planifolia HOM05D005657 ORTHO05D007104 2.4e-91 339.7 332 55.4
Nitab4.5_0000717g0030 Nicotiana tabacum HOM05D005657 ORTHO05D007104 5.4e-91 338.6 269 64.3
Hund15862 Selenicereus undatus HOM05D005657 ORTHO05D007104 3.1e-83 312.8 327 53.5
Lj2A319G39 Lonicera japonica HOM05D005657 ORTHO05D007104 3.8e-81 305.8 211 68.2
Actinidia07705 Actinidia chinensis HOM05D005657 ORTHO05D007104 1.9e-80 303.5 323 50.8
DCAR_027907 Daucus carota HOM05D005657 ORTHO05D007104 2.1e-79 300.1 276 52.9
DCAR_027906 Daucus carota HOM05D005657 ORTHO05D007104 4.0e-78 295.8 276 51.8
SalBow2G3627 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.2e-77 294.3 327 47.4
DCAR_027905 Daucus carota HOM05D005657 ORTHO05D007104 7.5e-77 291.6 250 54.8
Mapoly0156s0023 Marchantia polymorpha HOM05D005657 ORTHO05D007104 1.1e-75 287.7 279 53.0
Pp3c19_5890 Physcomitrium patens HOM05D005657 ORTHO05D007104 1.0e-73 281.2 269 53.2
AUR62030180 Chenopodium quinoa HOM05D005657 ORTHO05D007104 3.9e-73 279.3 174 74.1
SMO364G0117 Selaginella moellendorffii HOM05D005657 ORTHO05D007104 1.1e-72 277.7 276 52.9
Atru.chr10.1193 Acer truncatum HOM05D005657 ORTHO05D007104 4.3e-72 275.8 211 64.0
CDE01G0002 Ceratophyllum demersum HOM05D005657 ORTHO05D007104 4.3e-72 275.8 253 57.3
AagrBONN_evm.TU.Sc2ySwM_117.1613 Anthoceros agrestis HOM05D001134 ORTHO05D001035 7.3e-72 275.0 233 57.1
BcaB03g12196 Brassica carinata HOM05D005657 ORTHO05D007104 3.9e-65 252.7 173 69.4
Hma1.2p1_0020F.1_g014100 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 1.7e-60 237.3 183 66.1
Rhsim02G0159300 Rhododendron simsii HOM05D005657 ORTHO05D007104 2.2e-60 236.9 225 53.3
Os07g0153300 Oryza sativa ssp. japonica HOM05D005657 ORTHO05D007104 1.9e-59 233.8 174 66.7
Glyma.15G093200 Glycine max HOM05D005657 ORTHO05D007104 2.4e-59 233.4 178 66.9
SalBow2G2566 Salvia bowleyana HOM05D005657 ORTHO05D007104 5.1e-57 225.7 323 44.0
SGA_v2.0_scaffold333G48980 Striga asiatica HOM05D005657 ORTHO05D007104 7.6e-53 211.8 130 75.4
Hma1.2p1_0020F.1_g014120 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 4.9e-52 209.1 144 66.7
AUR62002725 Chenopodium quinoa HOM05D005657 ORTHO05D007104 1.8e-46 190.7 223 47.1
PRCOL_00005919 Prasinoderma coloniale HOM05D005657 ORTHO05D007104 7.1e-43 178.7 318 36.5
PGSC0003DMG400002455 Solanum tuberosum HOM05D005657 ORTHO05D007104 3.9e-41 172.9 142 57.0
MCO14G385 Micromonas commoda HOM05D005657 ORTHO05D007104 5.6e-40 169.1 235 41.3
unitig_26.g9756 Utricularia gibba HOM05D005657 ORTHO05D007104 9.6e-40 168.3 151 59.6
CBR_g39195 Chara braunii HOM05D005657 ORTHO05D007104 5.3e-38 162.5 431 29.7
Cre06.g269300 Chlamydomonas reinhardtii HOM05D005657 ORTHO05D007104 3.8e-36 156.4 236 40.3
TPR.G26247 Trifolium pratense HOM05D005657 ORTHO05D007104 5.4e-35 152.5 96 72.9
SalBow2G0785 Salvia bowleyana HOM05D005657 ORTHO05D007104 6.2e-31 139.0 177 45.8
SGA_v2.0_scaffold37G14914 Striga asiatica HOM05D005657 ORTHO05D007104 1.7e-20 104.4 61 77.0
unitig_26.g9757 Utricularia gibba HOM05D005657 ORTHO05D007104 2.1e-18 97.4 67 64.2
TPR.G7274 Trifolium pratense HOM05D005657 ORTHO05D007104 3.0e-17 93.6 55 72.7
COL.COLO4_31053 Corchorus olitorius HOM05D005657 ORTHO05D007104 8.7e-17 92.0 53 75.5
Glyma.08G293333 Glycine max HOM05D005657 ORTHO05D007104 1.0e-12 78.6 51 68.6
Phvul.007G245866 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 1.0e-12 78.6 45 75.6
SGA_v2.0_scaffold119G32786 Striga asiatica HOM05D005657 ORTHO05D007104 5.1e-09 66.2 50 64.0
Duzib160G0546 Durio zibethinus HOM05D005657 ORTHO05D007104 5.7e-08 62.8 36 66.7
SGA_v2.0_scaffold118G32549 Striga asiatica HOM05D005657 ORTHO05D007104 1.7e-07 61.2 31 87.1
CSS0012720 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 2.8e-07 60.5 37 67.6


User provided reference genes

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