Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 2.7e-113 412.1 230 100.0
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 5.3e-85 318.2 203 77.8
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 2.0e-84 316.2 200 77.0
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 7.7e-84 314.3 200 76.0
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 1.3e-83 313.5 201 74.6
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 1.9e-82 309.7 198 76.3
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 1.9e-82 309.7 199 76.9
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 3.2e-82 308.9 198 77.3
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 2.1e-81 306.2 198 73.7
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 2.7e-81 305.8 180 80.0
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 3.6e-81 305.4 200 75.0
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 3.6e-81 305.4 187 79.1
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 3.6e-81 305.4 199 74.4
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 1.0e-80 303.9 197 76.6
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 1.8e-80 303.1 197 75.6
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.3e-80 302.8 187 78.1
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 2.3e-80 302.8 198 73.7
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 5.2e-80 301.6 187 78.1
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.2e-79 300.4 187 78.1
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 1.5e-79 300.1 199 74.4
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 1.5e-79 300.1 187 77.0
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 2.0e-79 299.7 199 72.9
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 4.4e-79 298.5 195 74.4
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 5.7e-79 298.1 184 75.0
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 9.7e-79 297.4 200 74.0
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 2.8e-78 295.8 187 77.5
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 3.7e-78 295.4 194 71.6
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.1e-77 293.9 197 74.1
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 1.4e-77 293.5 191 71.7
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 1.8e-77 293.1 194 72.7
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 3.1e-77 292.4 202 71.8
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 3.1e-77 292.4 178 76.4
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 3.1e-77 292.4 195 71.8
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 3.1e-77 292.4 176 78.4
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 1.2e-76 290.4 198 69.7
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 1.6e-76 290.0 201 74.1
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 2.7e-76 289.3 176 78.4
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 3.5e-76 288.9 208 65.9
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 1.0e-75 287.3 185 71.9
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 1.0e-75 287.3 200 72.5
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 1.0e-75 287.3 201 72.1
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 1.7e-75 286.6 187 75.4
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 3.8e-75 285.4 198 69.2
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 5.0e-75 285.0 190 72.1
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 5.0e-75 285.0 196 70.9
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 6.5e-75 284.6 188 71.3
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 8.5e-75 284.3 202 66.8
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 1.1e-74 283.9 178 75.8
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 1.1e-74 283.9 196 70.4
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 1.5e-74 283.5 199 70.4
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 1.5e-74 283.5 196 70.4
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 1.5e-74 283.5 201 68.7
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 2.5e-74 282.7 201 68.7
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 5.5e-74 281.6 199 68.3
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 7.2e-74 281.2 202 66.3
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 9.4e-74 280.8 199 68.3
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 1.2e-73 280.4 199 71.4
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 1.2e-73 280.4 200 70.0
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 1.2e-73 280.4 176 74.4
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 3.6e-73 278.9 176 75.0
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 4.7e-73 278.5 184 74.5
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 8.0e-73 277.7 198 66.7
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 1.4e-72 276.9 179 73.2
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 2.3e-72 276.2 195 71.8
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 6.8e-72 274.6 195 70.3
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 8.8e-72 274.2 195 70.8
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 8.8e-72 274.2 195 70.8
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 8.8e-72 274.2 159 79.9
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 1.2e-71 273.9 195 70.8
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 1.5e-71 273.5 176 75.6
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 1.5e-71 273.5 170 76.5
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 1.5e-71 273.5 193 71.5
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 2.6e-71 272.7 185 73.0
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 4.4e-71 271.9 195 70.3
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 5.7e-71 271.6 182 74.2
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 7.5e-71 271.2 189 68.8
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 1.7e-70 270.0 195 69.7
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 8.3e-70 267.7 177 71.2
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 1.4e-69 266.9 201 67.2
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 1.8e-69 266.5 185 72.4
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 3.1e-69 265.8 200 67.5
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 2.0e-68 263.1 168 75.0
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 2.0e-68 263.1 168 75.0
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 2.7e-68 262.7 197 69.5
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 4.5e-68 261.9 187 65.2
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.3e-67 260.4 153 79.7
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 1.3e-67 260.4 178 68.0
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 2.3e-67 259.6 155 79.4
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 5.0e-67 258.5 155 76.1
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 2.3e-64 249.6 178 65.7
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 4.0e-64 248.8 171 67.3
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 8.9e-64 247.7 153 75.2
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 5.7e-63 245.0 155 74.8
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 7.5e-63 244.6 155 76.1
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 4.9e-62 241.9 158 72.8
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 1.8e-61 240.0 169 65.7
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 1.6e-60 236.9 179 62.0
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 5.9e-60 235.0 174 66.7
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 1.9e-58 229.9 199 61.8
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 2.5e-58 229.6 150 68.0
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 3.3e-58 229.2 155 72.9
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 9.5e-58 227.6 188 61.2
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 1.0e-56 224.2 186 61.8
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 3.7e-54 215.7 227 54.6
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 4.9e-54 215.3 201 58.2
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 2.5e-50 203.0 185 55.1
COL.COLO4_12549 Corchorus olitorius HOM05D006036 ORTHO05D007736 7.3e-50 201.4 139 69.8
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 1.4e-48 197.2 112 83.9
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 5.2e-48 195.3 199 52.3
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 1.3e-43 180.6 113 76.1
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 5.1e-43 178.7 169 58.0
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 4.0e-40 169.1 111 70.3
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 5.8e-39 165.2 94 83.0
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 6.4e-38 161.8 135 61.5
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 3.0e-35 152.9 94 76.6
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 7.3e-34 148.3 123 61.8
Migut.N01635 Erythranthe guttata HOM05D006036 ORTHO05D007736 9.5e-34 147.9 110 66.4
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 1.8e-32 143.7 173 45.7
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.0e-31 140.2 75 84.0
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 1.4e-29 134.0 83 73.5
Ca_19909_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 3.2e-29 132.9 106 62.3
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 6.0e-28 128.6 142 52.8
MELO3C034959.2 Cucumis melo HOM05D006036 ORTHO05D007736 1.4e-24 117.5 85 65.9
Gorai.007G091200 Gossypium raimondii HOM05D001611 ORTHO05D001464 5.3e-24 115.5 70 75.7
Lalb_Chr03g0039551 Lupinus albus HOM05D006036 ORTHO05D007736 1.5e-23 114.0 80 66.2
Gohir.D11G085366 Gossypium hirsutum HOM05D001611 ORTHO05D001464 9.9e-23 111.3 70 72.9
Lj1g0011795 Lotus japonicus HOM05D006036 ORTHO05D007736 3.5e-20 102.8 54 85.2
Psat3g116040 Pisum sativum HOM05D006036 ORTHO05D007736 5.1e-19 99.0 73 64.4
Gorai.004G161600 Gossypium raimondii HOM05D006036 ORTHO05D007736 2.6e-15 86.7 76 57.9
arahy.Tifrunner.gnm1.ann1.WD24C8 Arachis hypogaea HOM05D006036 ORTHO05D007736 1.9e-13 80.5 62 62.9
arahy.Tifrunner.gnm1.ann1.BW32E7 Arachis hypogaea HOM05D006036 ORTHO05D000587 1.0e-11 74.7 59 61.0


User provided reference genes

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