Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 8.2e-113 410.6 240 100.0
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 1.2e-47 194.1 240 50.4
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 6.0e-47 191.8 232 51.7
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 6.0e-47 191.8 230 51.7
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 2.8e-44 183.0 238 50.8
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 1.4e-43 180.6 235 49.8
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 1.8e-43 180.3 243 47.7
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 1.3e-41 174.1 231 47.2
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 1.1e-40 171.0 241 46.9
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 1.4e-40 170.6 238 47.5
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 7.1e-40 168.3 233 45.9
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 7.1e-40 168.3 234 46.6
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 1.2e-39 167.5 237 44.3
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 7.9e-39 164.9 230 47.4
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 1.1e-37 161.0 233 46.4
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 5.6e-37 158.7 233 43.8
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 9.6e-37 157.9 231 44.6
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 9.6e-37 157.9 237 43.0
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 9.6e-37 157.9 241 45.2
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 1.4e-35 154.1 242 44.2
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 6.9e-35 151.8 235 45.5
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 1.2e-34 151.0 234 44.9
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 2.6e-34 149.8 239 42.7
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 4.5e-34 149.1 253 41.1
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 1.0e-33 147.9 236 44.1
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 1.7e-33 147.1 238 41.6
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 4.9e-33 145.6 236 41.1
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 8.4e-33 144.8 239 41.8
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 1.4e-32 144.1 237 44.7
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 1.9e-32 143.7 233 41.2
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 3.2e-32 142.9 233 46.8
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 4.2e-32 142.5 233 42.1
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 4.2e-32 142.5 236 41.5
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 5.5e-32 142.1 237 42.6
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 7.1e-32 141.7 240 50.0
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 2.1e-31 140.2 237 43.9
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 4.6e-31 139.0 231 39.4
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 6.0e-31 138.7 236 42.4
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 1.3e-30 137.5 241 41.1
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.3e-30 137.5 241 41.1
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.3e-30 137.5 241 41.1
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 1.3e-30 137.5 236 41.9
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 1.3e-30 137.5 240 40.8
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 1.8e-30 137.1 237 42.2
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 3.0e-30 136.3 242 43.0
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 3.9e-30 136.0 232 42.2
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 3.9e-30 136.0 234 41.9
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 8.7e-30 134.8 239 39.3
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 1.1e-29 134.4 235 40.4
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 1.9e-29 133.7 278 37.1
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 3.3e-29 132.9 241 41.1
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 4.3e-29 132.5 238 39.9
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 4.3e-29 132.5 239 39.7
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 5.7e-29 132.1 260 41.2
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 5.7e-29 132.1 236 39.8
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 7.4e-29 131.7 240 42.1
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 2.2e-28 130.2 230 37.0
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 2.8e-28 129.8 242 40.1
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 1.4e-27 127.5 234 40.2
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.8e-27 127.1 241 39.8
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 1.8e-27 127.1 241 41.5
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 9.0e-27 124.8 236 38.6
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 9.0e-27 124.8 238 45.0
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 1.5e-26 124.0 253 38.3
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 2.6e-26 123.2 227 39.6
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 3.4e-26 122.9 237 38.0
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 5.9e-26 122.1 243 38.3
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 1.0e-25 121.3 233 37.3
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 1.0e-25 121.3 243 38.3
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 1.3e-25 120.9 240 35.4
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 5.0e-25 119.0 251 37.5
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 5.0e-25 119.0 233 36.9
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 6.5e-25 118.6 236 40.3
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 6.5e-25 118.6 232 39.2
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 6.5e-25 118.6 167 44.9
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 2.5e-24 116.7 237 37.6
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 2.5e-24 116.7 225 39.6
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 4.2e-24 115.9 230 37.4
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 9.3e-24 114.8 240 37.5
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 1.6e-23 114.0 239 37.7
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 2.7e-23 113.2 200 40.5
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 3.6e-23 112.8 231 38.1
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 6.1e-23 112.1 109 52.3
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 1.3e-22 110.9 173 44.5
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 2.3e-22 110.2 236 37.3
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 5.1e-22 109.0 236 35.2
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 5.1e-22 109.0 355 29.3
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 1.1e-21 107.8 218 37.2
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 1.5e-21 107.5 234 37.2
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 9.7e-21 104.8 232 39.2
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 2.2e-20 103.6 210 37.6
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 3.7e-20 102.8 229 36.2
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 3.7e-20 102.8 166 42.8
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 4.8e-20 102.4 137 48.2
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 1.4e-19 100.9 244 36.1
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 3.1e-19 99.8 138 44.2
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 5.3e-19 99.0 235 36.2
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 1.2e-18 97.8 71 64.8
Haze_16738 Corylus avellana HOM05D006684 ORTHO05D008443 1.5e-18 97.4 152 45.4
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 2.0e-18 97.1 80 57.5
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 7.7e-18 95.1 77 59.7
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 1.3e-17 94.4 230 33.0
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 5.0e-17 92.4 170 38.8
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 5.0e-17 92.4 126 46.8
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 6.5e-17 92.0 148 41.9
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 4.2e-16 89.4 74 55.4
Ah.07g198740 Amaranthus hybridus HOM05D006684 ORTHO05D008443 2.0e-13 80.5 197 36.0
MBI12_g38018_MAGBIO Magnolia biondii HOM05D006684 ORTHO05D008443 3.3e-13 79.7 159 40.9
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 4.4e-13 79.3 102 41.2
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 9.7e-13 78.2 122 43.4
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 2.2e-12 77.0 233 31.3
Actinidia33456 Actinidia chinensis HOM05D006684 ORTHO05D008443 1.8e-11 73.9 147 38.8
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 3.4e-10 69.7 234 29.5
HPP92_020257 Vanilla planifolia HOM05D006684 ORTHO05D008443 7.7e-10 68.6 209 36.4
Pp3c22_10350 Physcomitrium patens HOM05D006684 ORTHO05D008443 1.0e-09 68.2 235 29.4
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis HOM05D006684 ORTHO05D008443 6.5e-09 65.5 228 28.5
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 6.5e-09 65.5 208 30.3
Hma1.2p1_0053F.1_g030890 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 2.5e-08 63.5 120 40.0
Eucgr.E01355 Eucalyptus grandis HOM05D006684 ORTHO05D008443 3.2e-08 63.2 69 50.7
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 3.2e-08 63.2 96 45.8


User provided reference genes

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