Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01257 Eucalyptus grandis HOM05D007271 ORTHO05D009217 4.2e-306 1053.9 539 100.0
PGR042G3154 Punica granatum HOM05D007271 ORTHO05D009217 2.8e-201 705.7 533 66.8
Hma1.2p1_0635F.1_g193160 Hydrangea macrophylla HOM05D007271 ORTHO05D009217 6.5e-174 614.8 500 60.0
Haze_08102 Corylus avellana HOM05D007271 ORTHO05D009217 1.1e-170 604.0 506 58.5
Dinv29036 Davidia involucrata HOM05D007271 ORTHO05D009217 9.7e-170 600.9 525 58.7
CiPaw.12G070300 Carya illinoinensis HOM05D007271 ORTHO05D009217 2.2e-169 599.7 499 58.3
Nitab4.5_0005761g0060 Nicotiana tabacum HOM05D007271 ORTHO05D009217 2.0e-167 593.2 508 57.1
PGSC0003DMG400035874 Solanum tuberosum HOM05D007271 ORTHO05D009217 1.4e-165 587.0 495 57.4
Peaxi162Scf00185g01619 Petunia axillaris HOM05D007271 ORTHO05D009217 7.2e-165 584.7 495 57.8
Nitab4.5_0000109g0130 Nicotiana tabacum HOM05D007271 ORTHO05D009217 1.2e-164 583.9 508 55.9
Oeu061071.1 Olea europaea HOM05D007271 ORTHO05D009217 6.7e-163 578.2 534 54.9
Sopen08g024690 Solanum pennellii HOM05D007271 ORTHO05D009217 1.5e-162 577.0 495 57.0
CAN.G773.8 Capsicum annuum HOM05D007271 ORTHO05D009217 2.0e-162 576.6 495 56.2
Solyc08g076040.2 Solanum lycopersicum HOM05D007271 ORTHO05D009217 4.3e-162 575.5 495 56.8
GSVIVG01026362001 Vitis vinifera HOM05D007271 ORTHO05D009217 9.7e-162 574.3 506 55.3
Eucgr.D02621 Eucalyptus grandis HOM05D007271 ORTHO05D009217 2.2e-161 573.2 479 58.2
Ciclev10003885m.g Citrus clementina HOM05D007271 ORTHO05D009217 8.2e-161 571.2 494 56.1
Cfa012560 Carpinus fangiana HOM05D007271 ORTHO05D009217 1.1e-160 570.9 534 54.3
Peaxi162Scf00408g00227 Petunia axillaris HOM05D007271 ORTHO05D009217 1.8e-160 570.1 474 59.3
Prupe.5G024200 Prunus persica HOM05D007271 ORTHO05D009217 4.1e-160 568.9 487 58.9
TAR375G0504 Trochodendron aralioides HOM05D007271 ORTHO05D009217 9.1e-160 567.8 493 56.6
Lj8A323T49 Lonicera japonica HOM05D007271 ORTHO05D009217 1.3e-158 563.9 495 56.4
MD00G1000300 Malus domestica HOM05D007271 ORTHO05D009217 3.8e-158 562.4 491 56.2
Manes.17G011200 Manihot esculenta HOM05D007271 ORTHO05D009217 1.4e-157 560.5 484 56.8
SalBow4G2871 Salvia bowleyana HOM05D007271 ORTHO05D009217 9.4e-157 557.8 493 54.6
Thecc.03G314300 Theobroma cacao HOM05D007271 ORTHO05D009217 1.2e-156 557.4 483 56.1
DCAR_008194 Daucus carota HOM05D007271 ORTHO05D009217 2.3e-155 553.1 486 55.8
Duzib068G0217 Durio zibethinus HOM05D007271 ORTHO05D009217 5.1e-155 552.0 482 56.0
Cc08_g04070 Coffea canephora HOM05D007271 ORTHO05D009217 1.1e-154 550.8 495 53.9
Cpa.g.sc104.82 Carica papaya HOM05D007271 ORTHO05D009217 5.7e-154 548.5 487 55.6
Glyma.01G009700 Glycine max HOM05D007271 ORTHO05D009217 5.7e-154 548.5 493 57.4
Lalb_Chr05g0215551 Lupinus albus HOM05D007271 ORTHO05D009217 1.3e-153 547.4 514 54.3
Potri.001G133700 Populus trichocarpa HOM05D007271 ORTHO05D009217 2.2e-153 546.6 494 54.5
DCAR_004256 Daucus carota HOM05D007271 ORTHO05D009217 6.3e-153 545.0 487 55.4
FAN13G0287 Fragaria x ananassa HOM05D007271 ORTHO05D009217 6.3e-153 545.0 491 55.8
FvH4_5g23600 Fragaria vesca HOM05D007271 ORTHO05D009217 3.1e-152 542.7 510 54.1
VMungo1215G2496 Vigna mungo HOM05D007271 ORTHO05D009217 7.0e-152 541.6 527 54.1
FAN18G2511 Fragaria x ananassa HOM05D007271 ORTHO05D009217 9.1e-152 541.2 510 53.9
Gohir.A12G204300 Gossypium hirsutum HOM05D007271 ORTHO05D009217 1.2e-151 540.8 487 54.8
RcHm_v2.0_Chr7g0212901 Rosa chinensis HOM05D007271 ORTHO05D009217 1.2e-151 540.8 491 55.6
FAN08G2102 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.5e-151 540.4 491 55.4
TWI14G0446 Tripterygium wilfordii HOM05D007271 ORTHO05D009217 2.6e-151 539.7 471 54.8
Ca_25147_v3 Cicer arietinum L. HOM05D007271 ORTHO05D009217 4.5e-151 538.9 524 54.0
FAN18G2097 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.3e-150 537.3 510 53.7
Gohir.D12G206700 Gossypium hirsutum HOM05D007271 ORTHO05D009217 1.7e-150 537.0 484 55.4
Gorai.008G222100 Gossypium raimondii HOM05D007271 ORTHO05D009217 2.2e-150 536.6 484 55.4
Atru.chr6.1575 Acer truncatum HOM05D007271 ORTHO05D009217 8.5e-150 534.6 507 52.3
Medtr5g027460 Medicago truncatula HOM05D007271 ORTHO05D009217 1.2e-148 530.8 487 54.8
Psat2g139720 Pisum sativum HOM05D007271 ORTHO05D009217 2.7e-148 529.6 502 54.4
Oeu001193.1 Olea europaea HOM05D007271 ORTHO05D009217 1.8e-147 526.9 494 53.8
CANSAT21G2130 Cannabis sativa HOM05D007271 ORTHO05D009217 9.7e-146 521.2 503 54.5
MBI04_g36029_MAGBIO Magnolia biondii HOM05D007271 ORTHO05D009217 2.8e-145 519.6 486 51.4
Gorai.004G180600 Gossypium raimondii HOM05D007271 ORTHO05D009217 4.8e-145 518.8 495 53.1
Gohir.D08G173300 Gossypium hirsutum HOM05D007271 ORTHO05D009217 8.2e-145 518.1 479 54.3
Aqoxy7G00878 Aquilegia oxysepala HOM05D007271 ORTHO05D009217 1.1e-144 517.7 495 51.7
Lj2g0009393 Lotus japonicus HOM05D007271 ORTHO05D009217 1.8e-144 516.9 540 50.9
HanXRQChr17g0537681 Helianthus annuus HOM05D007271 ORTHO05D009217 7.0e-144 515.0 489 52.4
Lj4g0015364 Lotus japonicus HOM05D007271 ORTHO05D009217 4.5e-143 512.3 518 53.3
Hma1.2p1_1486F.1_g286550 Hydrangea macrophylla HOM05D007271 ORTHO05D009217 8.5e-142 508.1 401 59.9
Gohir.A08G152200 Gossypium hirsutum HOM05D007271 ORTHO05D009217 1.1e-141 507.7 495 52.3
Lsat_1_v5_gn_3_20940 Lactuca sativa HOM05D007271 ORTHO05D009217 4.2e-141 505.8 486 53.1
SalBow8G4630 Salvia bowleyana HOM05D007271 ORTHO05D009217 2.1e-140 503.4 489 51.1
Glyma.16G103000 Glycine max HOM05D007271 ORTHO05D009217 2.7e-140 503.1 496 52.6
Actinidia14763 Actinidia chinensis HOM05D007271 ORTHO05D009217 2.6e-138 496.5 533 50.5
PGR031G3520 Punica granatum HOM05D007271 ORTHO05D009217 1.7e-137 493.8 470 52.6
Psat4g109960 Pisum sativum HOM05D007271 ORTHO05D009217 4.5e-135 485.7 462 53.5
ClCG10G001150 Citrullus lanatus HOM05D007271 ORTHO05D009217 5.9e-135 485.3 528 47.7
Phvul.002G132600 Phaseolus vulgaris HOM05D007271 ORTHO05D009217 6.5e-134 481.9 432 56.7
Medtr8g071050 Medicago truncatula HOM05D007271 ORTHO05D009217 8.5e-134 481.5 471 50.7
unitig_748.g8136 Utricularia gibba HOM05D007271 ORTHO05D009217 2.7e-132 476.5 482 48.5
Phvul.003G273200 Phaseolus vulgaris HOM05D007271 ORTHO05D009217 8.0e-132 474.9 456 52.2
arahy.Tifrunner.gnm1.ann1.3Y0Q41 Arachis hypogaea HOM05D007271 ORTHO05D009217 5.2e-131 472.2 476 50.8
MELO3C013807.2 Cucumis melo HOM05D007271 ORTHO05D009217 2.6e-130 469.9 529 47.6
CsaV3_3G001170 Cucumis sativus L. HOM05D007271 ORTHO05D009217 4.4e-130 469.2 496 48.6
unitig_747.g21928 Utricularia gibba HOM05D007271 ORTHO05D009217 5.7e-130 468.8 490 48.4
TPR.G28964 Trifolium pratense HOM05D007271 ORTHO05D009217 4.8e-129 465.7 452 51.3
VMungo0251G3497 Vigna mungo HOM05D007271 ORTHO05D009217 3.1e-128 463.0 471 50.5
arahy.Tifrunner.gnm1.ann1.CI81A0 Arachis hypogaea HOM05D007271 ORTHO05D009217 8.6e-126 454.9 476 49.8
QL12p000436 Quercus lobata HOM05D007271 ORTHO05D009217 3.3e-125 453.0 422 56.6
Zm00001eb268890 Zea mays HOM05D007271 ORTHO05D009217 2.0e-122 443.7 485 48.7
PSO717G0049 Papaver somniferum HOM05D007271 ORTHO05D009217 9.8e-122 441.4 487 46.4
Os06g0113900 Oryza sativa ssp. japonica HOM05D007271 ORTHO05D009217 1.3e-121 441.0 487 48.0
Sed0019673 Sechium edule HOM05D007271 ORTHO05D009217 8.0e-116 421.8 495 46.5
Migut.A00579 Erythranthe guttata HOM05D007271 ORTHO05D009217 4.0e-115 419.5 495 45.9
ECA246G0509 Erigeron canadensis HOM05D007271 ORTHO05D009217 1.5e-109 401.0 474 45.4
Nitab4.5_0000809g0020 Nicotiana tabacum HOM05D007271 ORTHO05D009217 9.8e-106 388.3 355 54.6
FAN04G0635 Fragaria x ananassa HOM05D007271 ORTHO05D009217 3.7e-97 359.8 392 49.5
ATR0829G091 Amborella trichopoda HOM05D007271 ORTHO05D009217 4.1e-96 356.3 399 47.4
Ciclev10003404m.g Citrus clementina HOM05D007271 ORTHO05D009217 9.9e-74 282.0 487 34.7
unitig_32.g10968 Utricularia gibba HOM05D007271 ORTHO05D009217 4.3e-69 266.5 397 37.5
SEGI_35026 Sequoiadendron giganteum HOM05D007271 ORTHO05D009217 2.6e-66 257.3 480 32.7
HanXRQChr06g0172981 Helianthus annuus HOM05D007271 ORTHO05D009217 4.8e-52 209.9 186 51.6
HanXRQChr06g0172971 Helianthus annuus HOM05D007271 ORTHO05D009217 8.5e-49 199.1 199 51.3
TPR.G9088 Trifolium pratense HOM05D007271 ORTHO05D009217 4.1e-43 180.3 172 51.7
TPR.G9092 Trifolium pratense HOM05D007271 ORTHO05D009217 8.2e-28 129.4 97 60.8
TPR.G34495 Trifolium pratense HOM05D007271 ORTHO05D009217 1.8e-22 111.7 109 45.9
Ca_22492_v3 Cicer arietinum L. HOM05D007271 ORTHO05D009217 2.6e-21 107.8 90 52.2
COL.COLO4_16884 Corchorus olitorius HOM05D007271 ORTHO05D009217 1.1e-19 102.4 90 52.2
QL12p000442 Quercus lobata HOM05D007271 ORTHO05D009217 3.5e-18 97.4 67 64.2
TPR.G8637 Trifolium pratense HOM05D007271 ORTHO05D009217 6.5e-17 93.2 70 55.7
Oeu061072.1 Olea europaea HOM05D007271 ORTHO05D009217 5.5e-16 90.1 92 46.7
COL.COLO4_16886 Corchorus olitorius HOM05D007271 ORTHO05D009217 9.4e-16 89.4 84 46.4
arahy.Tifrunner.gnm1.ann1.RGNF9W Arachis hypogaea HOM05D007271 ORTHO05D009217 1.5e-13 82.0 92 43.5
arahy.Tifrunner.gnm1.ann1.WVYD0V Arachis hypogaea HOM05D007271 ORTHO05D009217 1.5e-13 82.0 92 43.5
PSO675G5865 Papaver somniferum HOM05D007271 ORTHO05D009217 2.4e-11 74.7 112 36.6
Zm00001eb364030 Zea mays HOM05D000778 ORTHO05D009217 4.0e-06 57.4 65 44.6


User provided reference genes

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