Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01247 Eucalyptus grandis HOM05D000090 ORTHO05D194746 1.7e-296 1021.9 509 100.0
Eucgr.E01244 Eucalyptus grandis HOM05D000090 ORTHO05D006608 2.7e-57 227.3 437 41.6
Cfa012570 Carpinus fangiana HOM05D000090 ORTHO05D006608 4.0e-32 143.7 447 30.9
Haze_08095 Corylus avellana HOM05D000090 ORTHO05D006608 4.4e-31 140.2 453 30.2
Atru.chr13.1189 Acer truncatum HOM05D000090 ORTHO05D006608 9.8e-31 139.0 452 30.3
RcHm_v2.0_Chr1g0339341 Rosa chinensis HOM05D000090 ORTHO05D006608 3.7e-30 137.1 449 30.7
CiPaw.11G101900 Carya illinoinensis HOM05D000090 ORTHO05D006608 6.0e-28 129.8 461 30.2
FAN03G2338 Fragaria x ananassa HOM05D000090 ORTHO05D006608 3.9e-27 127.1 429 29.6
FvH4_7g07510 Fragaria vesca HOM05D000090 ORTHO05D006608 8.6e-27 125.9 429 29.6
FAN06G5117 Fragaria x ananassa HOM05D000090 ORTHO05D006608 1.5e-26 125.2 433 29.3
Potri.001G133100 Populus trichocarpa HOM05D000090 ORTHO05D006608 5.6e-26 123.2 398 32.2
Eucgr.E01245 Eucalyptus grandis HOM05D000090 ORTHO05D006608 2.8e-25 120.9 461 29.1
Hma1.2p1_0979F.1_g243600 Hydrangea macrophylla HOM05D000090 ORTHO05D006608 4.7e-25 120.2 469 26.4
PGR042G3572 Punica granatum HOM05D000090 ORTHO05D006608 8.0e-25 119.4 450 29.3
TWI32G0266 Tripterygium wilfordii HOM05D000090 ORTHO05D006608 5.2e-24 116.7 474 27.2
QL02p064114 Quercus lobata HOM05D000090 ORTHO05D006608 7.5e-23 112.8 473 27.7
Hma1.2p1_1179F.1_g264440 Hydrangea macrophylla HOM05D000090 ORTHO05D006608 1.7e-22 111.7 307 31.3
PGR042G0593 Punica granatum HOM05D000090 ORTHO05D006608 2.2e-22 111.3 478 26.8
Prupe.2G101800 Prunus persica HOM05D000090 ORTHO05D006608 3.7e-22 110.5 443 28.2
Thecc.03G315100 Theobroma cacao HOM05D000090 ORTHO05D006608 1.4e-21 108.6 251 36.3
QL12p001014 Quercus lobata HOM05D000090 ORTHO05D006608 3.2e-21 107.5 473 26.0
Eucgr.E01246 Eucalyptus grandis HOM05D000090 ORTHO05D006608 4.1e-21 107.1 476 28.4
Potri.001G133000 Populus trichocarpa HOM05D000090 ORTHO05D006608 4.1e-21 107.1 474 27.4
CSS0039619 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D006608 1.6e-20 105.1 481 24.1
FvH4_5g23790 Fragaria vesca HOM05D000090 ORTHO05D006608 4.6e-20 103.6 432 27.1
Lj2g0008236 Lotus japonicus HOM05D000090 ORTHO05D006608 4.6e-20 103.6 452 25.0
RcHm_v2.0_Chr7g0213181 Rosa chinensis HOM05D000090 ORTHO05D006608 4.6e-20 103.6 459 26.1
Manes.03G111200 Manihot esculenta HOM05D000090 ORTHO05D006608 1.3e-19 102.1 476 25.4
FAN04G2800 Fragaria x ananassa HOM05D000090 ORTHO05D006608 1.7e-19 101.7 401 27.7
Cfa012571 Carpinus fangiana HOM05D000090 ORTHO05D006608 3.9e-19 100.5 478 25.1
Thecc.03G315200 Theobroma cacao HOM05D000090 ORTHO05D006608 3.9e-19 100.5 505 25.7
Duzib205G2000 Durio zibethinus HOM05D000090 ORTHO05D006608 5.1e-19 100.1 508 26.6
FAN08G1520 Fragaria x ananassa HOM05D000090 ORTHO05D006608 5.1e-19 100.1 431 27.4
RcHm_v2.0_Chr7g0213161 Rosa chinensis HOM05D000090 ORTHO05D006608 8.6e-19 99.4 447 24.8
FAN04G1655 Fragaria x ananassa HOM05D000090 ORTHO05D006608 1.1e-18 99.0 484 26.0
Atru.chr6.1588 Acer truncatum HOM05D000090 ORTHO05D006608 1.9e-18 98.2 485 26.6
Rhsim07G0137100 Rhododendron simsii HOM05D000090 ORTHO05D006608 1.9e-18 98.2 489 24.3
Actinidia14755 Actinidia chinensis HOM05D000090 ORTHO05D006608 2.5e-18 97.8 481 24.1
CSS0033555 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D006608 3.3e-18 97.4 441 27.7
Lj7P162T18 Lonicera japonica HOM05D000090 ORTHO05D006608 3.3e-18 97.4 449 24.3
Atru.chr6.1584 Acer truncatum HOM05D000090 ORTHO05D006608 2.1e-17 94.7 506 25.7
CiPaw.11G102000 Carya illinoinensis HOM05D000090 ORTHO05D006608 2.1e-17 94.7 497 26.2
RcHm_v2.0_Chr7g0213151 Rosa chinensis HOM05D000090 ORTHO05D006608 3.6e-17 94.0 272 32.0
Cc08_g04350 Coffea canephora HOM05D000090 ORTHO05D006608 4.7e-17 93.6 428 26.2
FAN13G1603 Fragaria x ananassa HOM05D000090 ORTHO05D006608 1.1e-16 92.4 447 25.5
Lju2073C0T3 Lonicera japonica HOM05D000090 ORTHO05D006608 1.1e-16 92.4 258 31.0
Sabra01G0102600 Salix brachista HOM05D000090 ORTHO05D006608 1.1e-16 92.4 494 25.9
Ciclev10003441m.g Citrus clementina HOM05D000090 ORTHO05D006608 1.8e-16 91.7 274 28.8
VMungo1215G2871 Vigna mungo HOM05D000090 ORTHO05D006608 1.8e-16 91.7 449 25.2
DCAR_028246 Daucus carota HOM05D000090 ORTHO05D006608 2.3e-16 91.3 512 24.0
FAN18G3164 Fragaria x ananassa HOM05D000090 ORTHO05D006608 4.0e-16 90.5 353 29.2
Eucgr.D02610 Eucalyptus grandis HOM05D000090 ORTHO05D006608 5.2e-16 90.1 446 25.1
Gohir.A12G204200 Gossypium hirsutum HOM05D000090 ORTHO05D006608 8.9e-16 89.4 310 30.6
FAN08G0753 Fragaria x ananassa HOM05D000090 ORTHO05D006608 1.2e-15 89.0 266 31.6
Gohir.D12G206600 Gossypium hirsutum HOM05D000090 ORTHO05D006608 2.0e-15 88.2 310 30.6
Lj8P325T15 Lonicera japonica HOM05D000090 ORTHO05D006608 2.0e-15 88.2 261 32.2
arahy.Tifrunner.gnm1.ann1.J9YHEP Arachis hypogaea HOM05D000090 ORTHO05D006608 2.6e-15 87.8 456 24.1
arahy.Tifrunner.gnm1.ann1.Q44N8G Arachis hypogaea HOM05D000090 ORTHO05D006608 2.6e-15 87.8 456 24.1
CSS0028084 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D006608 2.6e-15 87.8 440 26.4
COL.COLO4_16877 Corchorus olitorius HOM05D000090 ORTHO05D006608 2.6e-15 87.8 276 31.2
FvH4_5g23800 Fragaria vesca HOM05D000090 ORTHO05D006608 2.6e-15 87.8 447 24.6
Haze_08094 Corylus avellana HOM05D000090 ORTHO05D006608 3.4e-15 87.4 269 30.9
FAN18G2862 Fragaria x ananassa HOM05D000090 ORTHO05D006608 3.4e-15 87.4 312 29.8
Gorai.008G221800 Gossypium raimondii HOM05D000090 ORTHO05D006608 3.4e-15 87.4 310 30.6
CiPaw.12G070800 Carya illinoinensis HOM05D000090 ORTHO05D006608 5.8e-15 86.7 439 24.6
Haze_08092 Corylus avellana HOM05D000090 ORTHO05D006608 7.6e-15 86.3 436 24.8
Ciclev10003233m.g Citrus clementina HOM05D000090 ORTHO05D006608 2.2e-14 84.7 422 25.4
PGR031G3566 Punica granatum HOM05D000090 ORTHO05D006608 2.2e-14 84.7 431 26.7
Dinv29055 Davidia involucrata HOM05D000090 ORTHO05D006608 3.7e-14 84.0 441 24.9
FAN04G2526 Fragaria x ananassa HOM05D000090 ORTHO05D023184 3.7e-14 84.0 265 30.6
SalBow8G1620 Salvia bowleyana HOM05D000090 ORTHO05D006608 8.3e-14 82.8 421 24.5
Haze_08093 Corylus avellana HOM05D000090 ORTHO05D006608 1.1e-13 82.4 506 23.5
vmacro03035 Vaccinium macrocarpon HOM05D000090 ORTHO05D006608 1.1e-13 82.4 242 32.6
Ciclev10003109m.g Citrus clementina HOM05D000090 ORTHO05D006608 4.1e-13 80.5 400 24.8
Sc22g0001030 Simmondsia chinensis HOM05D000090 ORTHO05D006608 4.1e-13 80.5 289 29.4
SalBow8G3106 Salvia bowleyana HOM05D000090 ORTHO05D006608 5.4e-13 80.1 420 25.7
HanXRQChr17g0537361 Helianthus annuus HOM05D000090 ORTHO05D006608 9.2e-13 79.3 299 27.8
PGR042G3576 Punica granatum HOM05D000090 ORTHO05D006608 1.2e-12 79.0 466 24.0
Potri.003G100500 Populus trichocarpa HOM05D000090 ORTHO05D006608 1.6e-12 78.6 309 31.1
Dinv29056 Davidia involucrata HOM05D000090 ORTHO05D006608 2.1e-12 78.2 299 29.1
QL12p001009 Quercus lobata HOM05D000090 ORTHO05D006608 3.5e-12 77.4 436 24.8
Cfa012572 Carpinus fangiana HOM05D000090 ORTHO05D006608 6.0e-12 76.6 447 24.2
Phvul.002G132100 Phaseolus vulgaris HOM05D000090 ORTHO05D006608 6.0e-12 76.6 429 24.2
Oeu044979.1 Olea europaea HOM05D000090 ORTHO05D006608 1.0e-11 75.9 319 27.3
TPR.G29134 Trifolium pratense HOM05D000090 ORTHO05D006608 1.3e-11 75.5 455 23.3
Nn3g21158 Nelumbo nucifera HOM05D000090 ORTHO05D006608 1.7e-11 75.1 296 27.4
FAN01G2068 Fragaria x ananassa HOM05D004958 ORTHO05D005983 3.0e-11 74.3 396 26.0
Ca_25143_v3 Cicer arietinum L. HOM05D000090 ORTHO05D006608 5.1e-11 73.6 317 25.2
Actinidia18148 Actinidia chinensis HOM05D000090 ORTHO05D006608 1.5e-10 72.0 255 31.0
Atru.chr11.781 Acer truncatum HOM05D000090 ORTHO05D023184 3.3e-10 70.9 197 30.5
Migut.E01338 Erythranthe guttata HOM05D000090 ORTHO05D006608 4.3e-10 70.5 449 23.4
Psat2g141040 Pisum sativum HOM05D000090 ORTHO05D006608 4.3e-10 70.5 275 27.3
vmacro22925 Vaccinium macrocarpon HOM05D000090 ORTHO05D006608 3.6e-09 67.4 316 25.9
Prupe.5G022600 Prunus persica HOM05D000090 ORTHO05D006608 4.7e-09 67.0 507 23.7
Nitab4.5_0025368g0010 Nicotiana tabacum HOM05D000090 ORTHO05D006608 8.1e-09 66.2 212 28.8
Medtr5g027210 Medicago truncatula HOM05D000090 ORTHO05D006608 2.4e-08 64.7 451 22.2
Aqoxy1G01813 Aquilegia oxysepala HOM05D000090 ORTHO05D006608 8.9e-08 62.8 81 43.2
RcHm_v2.0_Chr7g0213141 Rosa chinensis HOM05D000090 ORTHO05D006608 2.0e-07 61.6 79 43.0
MD06G1013900 Malus domestica HOM05D000090 ORTHO05D006608 2.6e-07 61.2 197 29.4
Atru.chr11.782 Acer truncatum HOM05D000090 ORTHO05D030756 5.8e-07 60.1 72 48.6
FAN08G3286 Fragaria x ananassa HOM05D000090 ORTHO05D006608 1.3e-06 58.9 79 40.5
FAN08G3695 Fragaria x ananassa HOM05D000090 ORTHO05D006608 1.3e-06 58.9 147 29.3
FAN13G0208 Fragaria x ananassa HOM05D000090 ORTHO05D006608 2.2e-06 58.2 147 29.3
FAN13G0373 Fragaria x ananassa HOM05D000090 ORTHO05D006608 2.2e-06 58.2 147 29.3
FAN13G1821 Fragaria x ananassa HOM05D000090 ORTHO05D006608 2.2e-06 58.2 147 29.3
RcHm_v2.0_Chr7g0213111 Rosa chinensis HOM05D000090 ORTHO05D006608 2.2e-06 58.2 79 40.5
Peaxi162Scf00408g00053 Petunia axillaris HOM05D000090 ORTHO05D006608 3.8e-06 57.4 527 23.5
TAR629G2687 Trochodendron aralioides HOM05D000090 ORTHO05D006608 4.9e-06 57.0 75 42.7
FAN19G2531 Fragaria x ananassa HOM05D000090 ORTHO05D006608 8.4e-06 56.2 79 39.2


User provided reference genes

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