Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 1.1e-173 613.2 305 100.0
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 9.0e-173 610.1 305 99.3
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 4.0e-104 382.1 306 63.7
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 6.6e-99 364.8 285 63.9
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 4.7e-97 358.6 280 63.6
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 2.9e-94 349.4 286 59.1
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 4.9e-94 348.6 286 60.5
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.2e-92 344.0 276 61.2
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 2.7e-92 342.8 286 60.8
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 3.5e-92 342.4 276 61.6
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 1.0e-91 340.9 278 61.5
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 1.0e-91 340.9 285 57.9
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 1.3e-91 340.5 284 59.5
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.7e-91 340.1 276 61.6
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 1.1e-90 337.4 278 61.9
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 1.5e-90 337.0 276 60.1
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 1.9e-90 336.7 286 59.4
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 3.3e-90 335.9 287 57.8
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 4.3e-90 335.5 280 62.5
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 9.5e-90 334.3 277 60.6
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 2.1e-89 333.2 282 59.2
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 2.8e-89 332.8 302 54.6
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 3.6e-89 332.4 277 59.9
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 8.1e-89 331.3 285 60.4
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 8.1e-89 331.3 282 58.9
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 1.1e-88 330.9 280 61.1
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.4e-88 330.5 308 54.2
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 1.4e-88 330.5 308 54.2
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 2.3e-88 329.7 276 60.5
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 2.3e-88 329.7 304 54.6
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 6.8e-88 328.2 286 56.3
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 1.5e-87 327.0 280 59.6
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 2.0e-87 326.6 302 55.0
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 2.2e-86 323.2 278 57.2
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 4.9e-86 322.0 276 59.8
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 4.9e-86 322.0 302 54.6
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 4.9e-86 322.0 302 54.6
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 8.4e-86 321.2 269 61.3
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 1.9e-85 320.1 276 60.1
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 3.2e-85 319.3 295 55.6
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 7.1e-85 318.2 278 59.7
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 4.6e-84 315.5 286 56.6
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 4.6e-84 315.5 286 56.6
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 2.3e-83 313.2 280 57.5
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 3.9e-83 312.4 225 67.1
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 3.9e-83 312.4 284 54.9
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 2.1e-81 306.6 280 55.7
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 2.8e-81 306.2 303 50.2
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 2.8e-81 306.2 280 55.7
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 3.6e-81 305.8 234 64.5
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 3.6e-81 305.8 224 67.4
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 6.2e-81 305.1 289 52.9
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 1.1e-80 304.3 301 52.2
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 3.1e-80 302.8 281 54.4
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 4.0e-80 302.4 248 58.9
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 2.0e-79 300.1 277 54.2
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 3.4e-79 299.3 275 54.9
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 1.3e-78 297.4 229 63.3
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 8.4e-78 294.7 272 55.1
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 5.4e-77 292.0 276 54.7
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 5.4e-77 292.0 360 47.5
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 9.3e-77 291.2 277 54.2
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 1.2e-76 290.8 277 55.6
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 3.0e-75 286.2 290 51.4
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 1.5e-74 283.9 260 53.5
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 5.6e-74 282.0 225 60.0
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 6.2e-73 278.5 295 50.2
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 2.0e-71 273.5 287 50.2
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 1.7e-70 270.4 272 50.7
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 2.2e-70 270.0 279 49.5
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 2.9e-70 269.6 281 51.6
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 3.8e-70 269.2 292 46.9
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 3.8e-70 269.2 280 48.9
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 6.4e-70 268.5 276 49.6
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 1.1e-69 267.7 276 49.3
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 1.9e-69 266.9 284 48.9
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 2.4e-69 266.5 279 49.1
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 9.3e-69 264.6 292 49.0
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 4.6e-68 262.3 299 47.2
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 7.9e-68 261.5 284 48.6
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 7.9e-68 261.5 284 48.6
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 1.0e-67 261.2 285 48.1
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 1.0e-67 261.2 285 48.1
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 1.3e-67 260.8 280 48.2
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 2.3e-67 260.0 293 46.8
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 3.0e-67 259.6 278 47.8
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 3.9e-67 259.2 277 49.1
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 3.9e-67 259.2 194 67.5
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 5.1e-67 258.8 283 47.0
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 5.6e-66 255.4 231 55.0
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 2.1e-65 253.4 272 49.6
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 4.0e-64 249.2 216 56.0
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 4.0e-64 249.2 373 38.1
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 9.0e-64 248.1 199 64.3
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 9.9e-63 244.6 186 65.6
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.3e-62 244.2 179 67.0
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 2.9e-62 243.0 265 48.7
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 1.1e-61 241.1 318 44.0
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 7.1e-61 238.4 277 46.9
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 3.5e-60 236.1 295 47.8
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 2.3e-59 233.4 298 44.0
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 5.1e-59 232.3 224 51.3
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 8.7e-59 231.5 301 43.2
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 1.5e-58 230.7 300 44.7
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 1.9e-58 230.3 221 53.8
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 1.6e-57 227.3 282 45.4
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 7.6e-55 218.4 178 61.2
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 2.2e-54 216.9 237 47.3
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 6.0e-52 208.8 179 59.8
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 2.5e-50 203.4 280 41.8
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 8.2e-49 198.4 275 41.5
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 2.0e-47 193.7 171 55.0
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 7.6e-47 191.8 220 45.9
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 1.0e-46 191.4 181 50.8
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 5.0e-46 189.1 179 51.4
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 5.1e-43 179.1 181 50.8
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 9.4e-37 158.3 148 54.7
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 1.4e-35 154.5 183 45.4
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 9.4e-29 131.7 83 68.7
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 6.1e-28 129.0 259 35.1
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 3.2e-21 106.7 148 45.3
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 2.7e-20 103.6 278 29.1
Haze_08067 Corylus avellana HOM05D005964 ORTHO05D007242 3.0e-19 100.1 107 50.5
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 2.0e-15 87.4 172 32.6
AL8G21390 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 6.5e-14 82.4 105 37.1
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 4.0e-11 73.2 44 75.0
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 8.8e-11 72.0 151 31.8
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 6.3e-09 65.9 41 65.9
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 2.0e-07 60.8 50 54.0


User provided reference genes

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