Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 0.0e+00 1094.0 559 100.0
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 5.9e-178 628.2 533 60.0
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 2.7e-175 619.4 560 60.5
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 3.3e-173 612.5 488 63.9
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 5.7e-173 611.7 420 69.5
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 9.7e-173 610.9 420 69.0
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.1e-171 607.4 420 69.0
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 3.1e-171 605.9 500 62.8
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 2.0e-170 603.2 541 59.3
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.0e-169 600.9 420 69.0
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 3.8e-169 599.0 481 63.6
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 1.4e-168 597.0 493 62.9
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 9.4e-168 594.3 497 61.4
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 1.2e-167 594.0 511 60.3
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 1.6e-167 593.6 423 68.1
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 2.7e-167 592.8 560 58.4
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 6.7e-166 588.2 484 62.4
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 5.7e-165 585.1 423 66.0
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 6.3e-164 581.6 420 67.4
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 1.8e-163 580.1 416 65.6
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 1.5e-162 577.0 429 65.0
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 1.5e-162 577.0 492 59.1
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 7.7e-162 574.7 429 63.4
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 1.0e-161 574.3 409 66.5
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 2.9e-161 572.8 409 66.3
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 2.9e-161 572.8 551 56.4
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 5.0e-161 572.0 493 58.6
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 1.1e-160 570.9 503 58.1
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 1.1e-160 570.9 431 65.2
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 3.2e-160 569.3 544 57.5
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 5.5e-160 568.5 435 64.8
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 7.2e-160 568.2 416 65.1
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 9.4e-160 567.8 543 56.5
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 2.1e-159 566.6 478 60.5
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 4.7e-159 565.5 441 62.1
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 1.4e-158 563.9 426 64.1
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 1.8e-158 563.5 482 60.8
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 1.8e-158 563.5 486 58.4
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 6.7e-158 561.6 478 59.6
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 8.8e-158 561.2 474 59.3
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 8.8e-158 561.2 423 62.9
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 2.0e-157 560.1 449 61.9
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.0e-157 560.1 423 62.6
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 9.7e-157 557.8 506 57.5
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 9.7e-157 557.8 475 60.0
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 1.3e-156 557.4 492 58.1
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 2.2e-156 556.6 398 66.8
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 2.8e-156 556.2 469 59.7
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 3.1e-155 552.7 484 58.5
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 2.6e-154 549.7 496 56.7
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 3.5e-154 549.3 408 62.7
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 4.5e-154 548.9 511 56.2
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 4.5e-154 548.9 499 56.5
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 7.7e-154 548.1 445 61.3
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 7.7e-154 548.1 480 57.9
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 7.7e-154 548.1 528 55.5
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 1.5e-152 543.9 483 57.1
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 1.9e-152 543.5 430 61.4
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 1.2e-151 540.8 439 62.0
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 3.6e-151 539.3 495 56.4
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 3.6e-151 539.3 492 57.3
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 6.1e-151 538.5 444 60.4
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.0e-150 537.7 485 55.9
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 1.8e-150 537.0 510 56.1
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 3.0e-150 536.2 423 60.3
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 3.0e-150 536.2 483 56.7
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 6.7e-150 535.0 425 60.9
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 1.5e-149 533.9 392 65.8
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 2.6e-149 533.1 438 61.0
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 2.2e-148 530.0 556 50.9
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 2.8e-148 529.6 428 61.2
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 1.8e-147 526.9 433 60.5
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 9.1e-147 524.6 433 59.8
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 3.5e-146 522.7 433 59.6
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 4.5e-146 522.3 428 58.4
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 8.5e-145 518.1 496 54.2
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 1.5e-144 517.3 484 54.5
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 9.8e-141 504.6 473 55.8
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 1.6e-138 497.3 508 52.4
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 6.1e-135 485.3 448 56.5
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 1.8e-131 473.8 358 59.8
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 2.9e-129 466.5 493 50.9
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 7.0e-123 445.3 298 71.5
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 2.9e-116 423.3 292 68.8
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 4.1e-115 419.5 284 69.4
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 7.0e-115 418.7 474 43.7
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 1.6e-114 417.5 388 51.5
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 5.2e-110 402.5 420 48.1
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 4.4e-109 399.4 288 66.3
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 2.2e-108 397.1 300 64.7
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 3.2e-107 393.3 344 53.8
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 1.2e-101 374.8 278 64.0
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 1.4e-99 367.9 484 46.5
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 9.2e-99 365.2 510 45.3
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 2.2e-92 344.0 262 66.4
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 8.4e-92 342.0 359 48.7
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 7.8e-90 335.5 236 68.2
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 1.3e-89 334.7 364 47.5
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 3.0e-89 333.6 463 41.7
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 9.6e-88 328.6 230 70.0
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 9.6e-88 328.6 219 68.0
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 3.2e-83 313.5 247 65.2
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.8e-62 244.6 166 69.9
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 2.6e-61 240.7 472 33.7
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 6.5e-60 236.1 236 54.2
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 6.9e-54 216.1 314 37.6
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 1.0e-44 185.7 305 35.1
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 1.1e-38 165.6 387 30.2
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 5.3e-38 163.3 214 46.7
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 1.2e-37 162.2 401 30.7
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 2.6e-37 161.0 103 74.8
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 4.2e-35 153.7 217 44.7
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 5.5e-35 153.3 139 54.7
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 9.4e-35 152.5 172 50.0
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 3.0e-33 147.5 107 69.2
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 2.8e-31 141.0 254 40.2
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 2.5e-27 127.9 91 69.2
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 2.5e-27 127.9 132 47.7
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 3.4e-24 117.5 330 31.2
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 4.4e-16 90.5 98 48.0
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 2.2e-15 88.2 66 66.7
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 3.5e-13 80.9 62 58.1
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 1.4e-09 68.9 35 74.3
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.4e-08 64.3 44 65.9
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 1.1e-06 59.3 41 65.9


User provided reference genes

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