Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01158 Eucalyptus grandis HOM05D003428 ORTHO05D004131 3.6e-106 388.3 196 100.0
Eucgr.L03057 Eucalyptus grandis HOM05D003428 ORTHO05D004131 1.1e-94 350.1 196 90.3
Eucgr.E04091 Eucalyptus grandis HOM05D003428 ORTHO05D004131 1.3e-84 316.6 191 86.4
PGR042G0159 Punica granatum HOM05D003428 ORTHO05D004131 6.9e-49 198.0 189 58.2
RcHm_v2.0_Chr5g0003711 Rosa chinensis HOM05D003428 ORTHO05D004131 5.6e-43 178.3 190 58.4
FAN25G3463 Fragaria x ananassa HOM05D003428 ORTHO05D004131 7.3e-43 177.9 189 56.1
Prupe.4G024000 Prunus persica HOM05D003428 ORTHO05D004131 2.8e-42 176.0 193 55.4
FvH4_3g02460 Fragaria vesca HOM05D003428 ORTHO05D004131 6.2e-42 174.9 189 56.1
FAN21G0107 Fragaria x ananassa HOM05D003428 ORTHO05D004131 6.2e-42 174.9 189 56.1
MD10G1317800 Malus domestica HOM05D003428 ORTHO05D004131 1.4e-41 173.7 190 54.2
MD05G1342900 Malus domestica HOM05D003428 ORTHO05D004131 2.4e-41 172.9 190 53.7
TWI38G0331 Tripterygium wilfordii HOM05D003428 ORTHO05D004131 9.0e-41 171.0 193 54.4
Cfa000250 Carpinus fangiana HOM05D003428 ORTHO05D004131 1.2e-40 170.6 190 54.7
TWI38G0316 Tripterygium wilfordii HOM05D003428 ORTHO05D004131 2.0e-40 169.9 192 53.1
MELO3C002470.2 Cucumis melo HOM05D003428 ORTHO05D004131 7.6e-40 167.9 187 52.4
Dinv20034 Davidia involucrata HOM05D003428 ORTHO05D004131 7.6e-40 167.9 190 51.6
Manes.16G010100 Manihot esculenta HOM05D003428 ORTHO05D004131 1.3e-39 167.2 193 54.4
QL05p074042 Quercus lobata HOM05D003428 ORTHO05D004131 2.9e-39 166.0 193 54.4
GSVIVG01012655001 Vitis vinifera HOM05D003428 ORTHO05D004131 3.8e-39 165.6 190 52.1
Haze_06774 Corylus avellana HOM05D003428 ORTHO05D004131 4.9e-39 165.2 190 54.7
DCAR_004205 Daucus carota HOM05D003428 ORTHO05D004131 4.9e-39 165.2 197 51.8
ClCG03G004880 Citrullus lanatus HOM05D003428 ORTHO05D004131 6.4e-39 164.9 188 51.6
Gohir.D06G153100 Gossypium hirsutum HOM05D003428 ORTHO05D004131 6.4e-39 164.9 191 52.4
Gorai.010G179100 Gossypium raimondii HOM05D003428 ORTHO05D004131 6.4e-39 164.9 191 52.4
Gohir.A06G147300 Gossypium hirsutum HOM05D003428 ORTHO05D004131 8.4e-39 164.5 191 51.8
Sed0007172 Sechium edule HOM05D003428 ORTHO05D004131 1.1e-38 164.1 187 51.9
PSO832G0075 Papaver somniferum HOM05D003428 ORTHO05D004131 3.2e-38 162.5 200 49.0
Sopen02g025040 Solanum pennellii HOM05D003428 ORTHO05D004131 3.2e-38 162.5 199 48.2
CsaV3_1G010910 Cucumis sativus L. HOM05D003428 ORTHO05D004131 7.1e-38 161.4 187 50.8
Thhalv10023219m.g Eutrema salsugineum HOM05D003428 ORTHO05D004131 1.2e-37 160.6 193 50.8
PSO210G3795 Papaver somniferum HOM05D003428 ORTHO05D004131 3.5e-37 159.1 196 48.0
COL.COLO4_31743 Corchorus olitorius HOM05D003428 ORTHO05D004131 4.6e-37 158.7 191 51.8
Solyc02g080340.3 Solanum lycopersicum HOM05D003428 ORTHO05D004131 6.0e-37 158.3 214 47.2
Thecc.06G217400 Theobroma cacao HOM05D003428 ORTHO05D004131 6.0e-37 158.3 187 51.9
TAR624G0497 Trochodendron aralioides HOM05D003428 ORTHO05D004131 7.9e-37 157.9 189 50.3
CiPaw.09G089300 Carya illinoinensis HOM05D003428 ORTHO05D004131 1.0e-36 157.5 193 51.8
Sp2g02690 Schrenkiella parvula HOM05D003428 ORTHO05D004131 1.0e-36 157.5 198 49.5
BcaC04g22357 Brassica carinata HOM05D003428 ORTHO05D004131 1.3e-36 157.1 193 51.3
C09p20200 Brassica napus HOM05D003428 ORTHO05D004131 1.3e-36 157.1 193 51.3
BolC9t54926H Brassica oleracea HOM05D003428 ORTHO05D004131 1.3e-36 157.1 193 51.3
Lj2C271T3 Lonicera japonica HOM05D003428 ORTHO05D004131 3.0e-36 156.0 190 48.4
AT1G61850 Arabidopsis thaliana HOM05D003428 ORTHO05D004131 3.9e-36 155.6 198 49.0
A09p16630 Brassica napus HOM05D003428 ORTHO05D004131 3.9e-36 155.6 193 50.8
BraA09t37300Z Brassica rapa HOM05D003428 ORTHO05D004131 5.1e-36 155.2 193 50.8
CiPaw.10G069400 Carya illinoinensis HOM05D003428 ORTHO05D004131 5.1e-36 155.2 196 51.0
Duzib235G0114 Durio zibethinus HOM05D003428 ORTHO05D004131 5.1e-36 155.2 191 48.7
CAN.G569.22 Capsicum annuum HOM05D003428 ORTHO05D004131 6.7e-36 154.8 208 47.1
Cc09_g01930 Coffea canephora HOM05D003428 ORTHO05D004131 6.7e-36 154.8 196 49.5
Nn1g03583 Nelumbo nucifera HOM05D003428 ORTHO05D004131 1.1e-35 154.1 189 50.3
AUR62012675 Chenopodium quinoa HOM05D003428 ORTHO05D004131 1.5e-35 153.7 190 47.4
THA.LOC104809511 Tarenaya hassleriana HOM05D003428 ORTHO05D004131 2.5e-35 152.9 201 50.2
Rhsim02G0110400 Rhododendron simsii HOM05D003428 ORTHO05D004131 3.3e-35 152.5 205 49.8
SalBow3G0064 Salvia bowleyana HOM05D003428 ORTHO05D004131 3.3e-35 152.5 211 46.9
SalBow3G1270 Salvia bowleyana HOM05D003428 ORTHO05D004131 3.3e-35 152.5 211 46.9
AL2G14210 Arabidopsis lyrata HOM05D003428 ORTHO05D004131 4.3e-35 152.1 195 48.7
Cpa.g.sc198.25 Carica papaya HOM05D003428 ORTHO05D004131 4.3e-35 152.1 192 50.0
Glyma.17G015200 Glycine max HOM05D003428 ORTHO05D004131 7.4e-35 151.4 191 48.7
Aa31LG2G8980 Aethionema arabicum HOM05D003428 ORTHO05D004131 1.6e-34 150.2 201 47.3
Carub.0002s0319 Capsella rubella HOM05D003428 ORTHO05D004131 2.1e-34 149.8 195 48.7
MBI02_g28339_MAGBIO Magnolia biondii HOM05D003428 ORTHO05D004131 4.8e-34 148.7 189 46.0
Gorai.009G177000 Gossypium raimondii HOM05D003428 ORTHO05D004131 8.1e-34 147.9 190 48.9
BcaB07g31289 Brassica carinata HOM05D003428 ORTHO05D004131 1.4e-33 147.1 190 48.9
Ciclev10014053m.g Citrus clementina HOM05D003428 ORTHO05D004131 1.4e-33 147.1 193 50.8
ATR0752G216 Amborella trichopoda HOM05D003428 ORTHO05D004131 1.8e-33 146.7 192 44.8
Lalb_Chr15g0087431 Lupinus albus HOM05D003428 ORTHO05D004131 4.0e-33 145.6 189 49.2
HPP92_017608 Vanilla planifolia HOM05D003428 ORTHO05D004131 9.0e-33 144.4 191 45.5
Gohir.D10G014100 Gossypium hirsutum HOM05D003428 ORTHO05D004131 2.0e-32 143.3 188 47.3
Aa31LG1G3130 Aethionema arabicum HOM05D003428 ORTHO05D004131 3.4e-32 142.5 190 50.0
AUR62021981 Chenopodium quinoa HOM05D003428 ORTHO05D004131 5.8e-32 141.7 121 60.3
SGA_v2.0_scaffold7G03871 Striga asiatica HOM05D003428 ORTHO05D004131 5.8e-32 141.7 233 42.1
Peaxi162Scf00262g00059 Petunia axillaris HOM05D003428 ORTHO05D004131 1.3e-31 140.6 217 42.9
Migut.M01297 Erythranthe guttata HOM05D003428 ORTHO05D004131 1.7e-31 140.2 222 42.3
Oeu063903.1 Olea europaea HOM05D003428 ORTHO05D004131 4.9e-31 138.7 190 45.3
Lsat_1_v5_gn_1_124260 Lactuca sativa HOM05D003428 ORTHO05D004131 4.2e-30 135.6 209 44.0
Oeu043543.1 Olea europaea HOM05D003428 ORTHO05D004131 4.2e-30 135.6 233 41.2
CARHR050470 Cardamine hirsuta HOM05D003428 ORTHO05D004131 7.1e-30 134.8 128 57.0
arahy.Tifrunner.gnm1.ann1.IL23TX Arachis hypogaea HOM05D003428 ORTHO05D004131 9.3e-30 134.4 193 44.0
Lsat_1_v5_gn_7_17340 Lactuca sativa HOM05D003428 ORTHO05D004131 9.3e-30 134.4 208 43.3
arahy.Tifrunner.gnm1.ann1.FVAC65 Arachis hypogaea HOM05D003428 ORTHO05D004131 1.6e-29 133.7 193 44.0
Hund23486 Selenicereus undatus HOM05D003428 ORTHO05D004131 2.7e-29 132.9 200 42.0
Ah.14g088090 Amaranthus hybridus HOM05D003428 ORTHO05D004131 3.5e-29 132.5 191 46.1
Ah.09g235070 Amaranthus hybridus HOM05D003428 ORTHO05D004131 1.0e-28 131.0 190 42.1
CDE05G1926 Ceratophyllum demersum HOM05D003428 ORTHO05D004131 1.0e-28 131.0 189 41.3
arahy.Tifrunner.gnm1.ann1.0P9V0B Arachis hypogaea HOM05D003428 ORTHO05D004131 2.3e-28 129.8 194 43.8
HanXRQChr01g0003631 Helianthus annuus HOM05D003428 ORTHO05D004131 3.0e-28 129.4 204 44.6
Nitab4.5_0010096g0010 Nicotiana tabacum HOM05D003428 ORTHO05D004131 1.1e-27 127.5 211 40.8
Zm00001eb106120 Zea mays HOM05D003428 ORTHO05D004131 1.9e-27 126.7 196 43.4
Aqoxy7G03064 Aquilegia oxysepala HOM05D003428 ORTHO05D004131 2.5e-27 126.3 216 39.4
Lj1A1228G69 Lonicera japonica HOM05D003428 ORTHO05D004131 2.5e-27 126.3 125 54.4
Os07g0520900 Oryza sativa ssp. japonica HOM05D003428 ORTHO05D004131 7.4e-27 124.8 206 42.7
Phvul.003G077100 Phaseolus vulgaris HOM05D003428 ORTHO05D004131 9.6e-27 124.4 194 43.3
unitig_748.g7971 Utricularia gibba HOM05D003428 ORTHO05D004131 1.3e-26 124.0 207 39.6
ECA248G3692 Erigeron canadensis HOM05D003428 ORTHO05D004131 4.8e-26 122.1 164 46.3
Zm00001eb322860 Zea mays HOM05D003428 ORTHO05D004131 8.2e-26 121.3 197 42.6
Sabra04G0010400 Salix brachista HOM05D003428 ORTHO05D004131 1.1e-25 120.9 185 44.3
HanXRQChr05g0129871 Helianthus annuus HOM05D003428 ORTHO05D004131 3.1e-25 119.4 208 39.9
ECA236G4773 Erigeron canadensis HOM05D003428 ORTHO05D004131 5.3e-25 118.6 152 48.7
arahy.Tifrunner.gnm1.ann1.YW42SM Arachis hypogaea HOM05D003428 ORTHO05D004131 1.2e-24 117.5 189 39.7
Potri.011G000200 Populus trichocarpa HOM05D003428 ORTHO05D004131 2.0e-24 116.7 187 42.8
vmacro15816 Vaccinium macrocarpon HOM05D003428 ORTHO05D004131 3.4e-24 115.9 113 58.4
Atru.chr10.2177 Acer truncatum HOM05D003428 ORTHO05D004131 1.3e-23 114.0 131 54.2
arahy.Tifrunner.gnm1.ann1.D341M5 Arachis hypogaea HOM05D003428 ORTHO05D004131 1.9e-22 110.2 189 38.1
CSS0033465 Camellia sinensis var. sinensis HOM05D003428 ORTHO05D004131 4.2e-22 109.0 198 38.9
Hund21391 Selenicereus undatus HOM05D003428 ORTHO05D004131 9.3e-22 107.8 172 41.3
EL10Ac8g20020 Beta vulgaris HOM05D003428 ORTHO05D004131 2.1e-21 106.7 152 43.4
VMungo1215G2587 Vigna mungo HOM05D003428 ORTHO05D004131 2.1e-21 106.7 194 40.7
Potri.004G018700 Populus trichocarpa HOM05D003428 ORTHO05D004131 1.8e-20 103.6 186 40.9
CSS0004273 Camellia sinensis var. sinensis HOM05D003428 ORTHO05D004131 8.7e-20 101.3 98 59.2
CSS0019319 Camellia sinensis var. sinensis HOM05D003428 ORTHO05D004131 8.7e-20 101.3 98 59.2
Pp3c14_24720 Physcomitrium patens HOM05D003428 ORTHO05D004131 1.1e-19 100.9 205 38.0
Mapoly0096s0015 Marchantia polymorpha HOM05D003428 ORTHO05D004131 4.3e-19 99.0 217 37.8
Ca_21094_v3 Cicer arietinum L. HOM05D003428 ORTHO05D004131 1.4e-17 94.0 199 34.7
Ca_30202_v3 Cicer arietinum L. HOM05D003428 ORTHO05D004131 1.4e-17 94.0 199 34.7
Hma1.2p1_3566F.1_g336820 Hydrangea macrophylla HOM05D003428 ORTHO05D004131 4.1e-17 92.4 131 44.3
Psat4g063040 Pisum sativum HOM05D003428 ORTHO05D004131 5.3e-17 92.0 189 34.4
TPR.G37012 Trifolium pratense HOM05D003428 ORTHO05D004131 5.9e-16 88.6 190 34.2
Eucgr.B02131 Eucalyptus grandis HOM05D050785 ORTHO05D004131 7.7e-16 88.2 58 75.9
Glyma.07G259000 Glycine max HOM05D003428 ORTHO05D004131 7.7e-16 88.2 93 51.6
Lj4g0005527 Lotus japonicus HOM05D003428 ORTHO05D004131 5.0e-15 85.5 92 50.0
Eucgr.H03695 Eucalyptus grandis HOM05D050785 ORTHO05D004131 5.5e-14 82.0 58 70.7
Medtr4g131850 Medicago truncatula HOM05D003428 ORTHO05D004131 7.2e-14 81.6 98 48.0
SEGI_09197 Sequoiadendron giganteum HOM05D003428 ORTHO05D004131 1.2e-13 80.9 195 31.3
Hma1.2p1_2687F.1_g326960 Hydrangea macrophylla HOM05D003428 ORTHO05D004131 4.6e-13 79.0 77 53.2
MSTRG.13151 Avicennia marina HOM05D003428 ORTHO05D004131 1.5e-11 73.9 116 39.7
HanXRQChr15g0471381 Helianthus annuus HOM05D003428 ORTHO05D004131 7.4e-11 71.6 68 55.9
SMO367G0744 Selaginella moellendorffii HOM05D003428 ORTHO05D004131 2.2e-10 70.1 127 35.4
Actinidia11848 Actinidia chinensis HOM05D003428 ORTHO05D004131 8.2e-10 68.2 60 63.3
QL10p056553 Quercus lobata HOM05D003428 ORTHO05D004131 1.8e-09 67.0 94 45.7
CBR_g8997 Chara braunii HOM05D003428 ORTHO05D004131 4.1e-09 65.9 217 30.4


User provided reference genes

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