Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01152 Eucalyptus grandis HOM05D005907 ORTHO05D007033 9.9e-98 360.1 186 100.0
Atru.chr8.2614 Acer truncatum HOM05D005907 ORTHO05D007033 7.7e-42 174.5 183 48.1
Ciclev10012886m.g Citrus clementina HOM05D005907 ORTHO05D007033 1.0e-41 174.1 181 50.3
Cfa012308 Carpinus fangiana HOM05D005907 ORTHO05D007033 6.5e-41 171.4 175 48.0
Actinidia01244 Actinidia chinensis HOM05D005907 ORTHO05D007033 5.5e-40 168.3 172 46.5
CiPaw.11G074000 Carya illinoinensis HOM05D005907 ORTHO05D007033 1.6e-39 166.8 186 44.1
TWI60G0533 Tripterygium wilfordii HOM05D005907 ORTHO05D007033 2.1e-39 166.4 186 45.2
TAR636G1547 Trochodendron aralioides HOM05D005907 ORTHO05D007033 2.7e-39 166.0 188 48.4
CSS0017808 Camellia sinensis var. sinensis HOM05D005907 ORTHO05D007033 2.3e-38 162.9 175 44.6
MD06G1011300 Malus domestica HOM05D005907 ORTHO05D007033 6.7e-38 161.4 185 46.5
Prupe.5G013600 Prunus persica HOM05D005907 ORTHO05D007033 8.8e-38 161.0 172 50.0
RcHm_v2.0_Chr7g0215261 Rosa chinensis HOM05D005907 ORTHO05D007033 1.7e-36 156.8 165 47.3
Rhsim11G0037900 Rhododendron simsii HOM05D005907 ORTHO05D007033 3.7e-36 155.6 172 42.4
Duzib205G2043 Durio zibethinus HOM05D005907 ORTHO05D007033 1.1e-35 154.1 183 44.3
Migut.A00472 Erythranthe guttata HOM05D005907 ORTHO05D007033 1.1e-35 154.1 166 44.0
Potri.004G235000 Populus trichocarpa HOM05D005907 ORTHO05D007033 1.4e-35 153.7 186 43.0
GSVIVG01036890001 Vitis vinifera HOM05D005907 ORTHO05D007033 1.8e-35 153.3 183 43.7
ClCG07G011130 Citrullus lanatus HOM05D005907 ORTHO05D007033 2.4e-35 152.9 169 51.5
Sed0007709 Sechium edule HOM05D005907 ORTHO05D007033 3.1e-35 152.5 163 50.3
Thecc.03G320600 Theobroma cacao HOM05D005907 ORTHO05D007033 3.1e-35 152.5 183 46.4
Nn1g09337 Nelumbo nucifera HOM05D005907 ORTHO05D007033 5.3e-35 151.8 175 48.6
vmacro00100 Vaccinium macrocarpon HOM05D005907 ORTHO05D007033 7.0e-35 151.4 184 40.2
Manes.17G003749 Manihot esculenta HOM05D005907 ORTHO05D007033 9.1e-35 151.0 183 41.5
COL.COLO4_16745 Corchorus olitorius HOM05D005907 ORTHO05D007033 2.0e-34 149.8 181 44.2
FAN04G3107 Fragaria x ananassa HOM05D005907 ORTHO05D007033 2.0e-34 149.8 184 44.0
arahy.Tifrunner.gnm1.ann1.4G5U2W Arachis hypogaea HOM05D005907 ORTHO05D007033 3.5e-34 149.1 184 40.8
arahy.Tifrunner.gnm1.ann1.Y9HS7A Arachis hypogaea HOM05D005907 ORTHO05D007033 3.5e-34 149.1 184 40.8
MSTRG.25750 Avicennia marina HOM05D005907 ORTHO05D007033 3.5e-34 149.1 169 45.0
Oeu046770.1 Olea europaea HOM05D005907 ORTHO05D007033 3.5e-34 149.1 172 43.0
CsaV3_4G007120 Cucumis sativus L. HOM05D005907 ORTHO05D007033 7.7e-34 147.9 168 50.0
Medtr5g025640 Medicago truncatula HOM05D005907 ORTHO05D007033 1.3e-33 147.1 178 41.6
FvH4_5g24980 Fragaria vesca HOM05D005907 ORTHO05D007033 1.7e-33 146.7 177 44.6
FAN08G1334 Fragaria x ananassa HOM05D005907 ORTHO05D007033 1.7e-33 146.7 180 43.3
FAN18G3850 Fragaria x ananassa HOM05D005907 ORTHO05D007033 1.7e-33 146.7 177 44.6
Oeu047809.2 Olea europaea HOM05D005907 ORTHO05D007033 1.7e-33 146.7 168 41.7
Cc08_g05990 Coffea canephora HOM05D005907 ORTHO05D007033 2.9e-33 146.0 184 40.2
Lalb_Chr05g0215181 Lupinus albus HOM05D005907 ORTHO05D007033 6.5e-33 144.8 187 39.6
Peaxi162Scf00876g00429 Petunia axillaris HOM05D005907 ORTHO05D007033 8.5e-33 144.4 165 44.8
PGR042G1103 Punica granatum HOM05D005907 ORTHO05D007033 1.1e-32 144.1 162 46.9
PGR031G0343 Punica granatum HOM05D005907 ORTHO05D007033 1.5e-32 143.7 165 46.1
SalBow4G0438 Salvia bowleyana HOM05D005907 ORTHO05D007033 5.5e-32 141.7 158 44.3
Lj3A1053G42 Lonicera japonica HOM05D005907 ORTHO05D007033 7.2e-32 141.4 177 44.1
Nitab4.5_0000986g0090 Nicotiana tabacum HOM05D005907 ORTHO05D007033 7.2e-32 141.4 160 44.4
CAN.G998.7 Capsicum annuum HOM05D005907 ORTHO05D007033 9.4e-32 141.0 160 43.8
Lalb_Chr09g0325061 Lupinus albus HOM05D005907 ORTHO05D007033 2.1e-31 139.8 173 39.9
THA.LOC104814387 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 2.1e-31 139.8 181 42.0
Lalb_Chr16g0380441 Lupinus albus HOM05D005907 ORTHO05D007033 8.0e-31 137.9 173 41.0
Nn3g19120 Nelumbo nucifera HOM05D005907 ORTHO05D007033 1.0e-30 137.5 156 46.2
Gohir.A08G148600 Gossypium hirsutum HOM05D005907 ORTHO05D007033 1.4e-30 137.1 158 48.7
Gorai.004G176900 Gossypium raimondii HOM05D005907 ORTHO05D007033 1.4e-30 137.1 158 47.5
Dinv37434 Davidia involucrata HOM05D005907 ORTHO05D007033 4.0e-30 135.6 126 47.6
TPR.G8986 Trifolium pratense HOM05D005907 ORTHO05D007033 4.0e-30 135.6 178 39.9
Hund14310 Selenicereus undatus HOM05D005907 ORTHO05D007033 5.2e-30 135.2 147 49.0
BcaB04g18131 Brassica carinata HOM05D005907 ORTHO05D007033 1.2e-29 134.0 148 44.6
TAR629G0350 Trochodendron aralioides HOM05D005907 ORTHO05D007033 1.2e-29 134.0 170 44.7
Carub.0001s3002 Capsella rubella HOM05D005907 ORTHO05D007033 1.5e-29 133.7 173 43.4
Medtr8g072220 Medicago truncatula HOM05D005907 ORTHO05D007033 1.5e-29 133.7 171 40.9
Psat2g145040 Pisum sativum HOM05D005907 ORTHO05D007033 1.5e-29 133.7 178 39.3
THA.LOC104806200 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 1.5e-29 133.7 162 43.2
Duzib068G0478 Durio zibethinus HOM05D005907 ORTHO05D007033 2.0e-29 133.3 188 42.6
Solyc08g075290.2 Solanum lycopersicum HOM05D005907 ORTHO05D007033 2.0e-29 133.3 171 40.4
Lj2g0019236 Lotus japonicus HOM05D005907 ORTHO05D007033 2.6e-29 132.9 171 38.0
Gohir.D08G169700 Gossypium hirsutum HOM05D005907 ORTHO05D007033 3.4e-29 132.5 158 46.8
BcaC07g37737 Brassica carinata HOM05D005907 ORTHO05D007033 4.4e-29 132.1 158 43.7
BolC8t48118H Brassica oleracea HOM05D005907 ORTHO05D007033 4.4e-29 132.1 158 43.7
Sopen08g023890 Solanum pennellii HOM05D005907 ORTHO05D007033 4.4e-29 132.1 171 39.8
AL1G45790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 5.7e-29 131.7 160 44.4
Glyma.01G153000 Glycine max HOM05D005907 ORTHO05D007033 5.7e-29 131.7 179 40.2
A08p10440 Brassica napus HOM05D005907 ORTHO05D007033 7.5e-29 131.3 148 45.3
Sed0019955 Sechium edule HOM05D005907 ORTHO05D007033 7.5e-29 131.3 175 40.0
CANSAT35G1964 Cannabis sativa HOM05D005907 ORTHO05D007033 9.8e-29 131.0 154 45.5
VMungo1215G2629 Vigna mungo HOM05D001324 ORTHO05D001220 9.8e-29 131.0 178 36.5
PSO339G2078 Papaver somniferum HOM05D005907 ORTHO05D007033 1.7e-28 130.2 138 45.7
Glyma.09G218300 Glycine max HOM05D005907 ORTHO05D007033 2.2e-28 129.8 179 39.7
Glyma.16G076400 Glycine max HOM05D005907 ORTHO05D007033 2.8e-28 129.4 180 40.6
Nitab4.5_0006244g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 4.8e-28 128.6 162 42.6
CARHR031020 Cardamine hirsuta HOM05D005907 ORTHO05D007033 6.3e-28 128.3 159 43.4
Gorai.008G218600 Gossypium raimondii HOM05D005907 ORTHO05D007033 6.3e-28 128.3 170 39.4
Manes.15G184500 Manihot esculenta HOM05D005907 ORTHO05D007033 6.3e-28 128.3 144 41.0
Aa31LG2G14390 Aethionema arabicum HOM05D005907 ORTHO05D007033 8.3e-28 127.9 169 42.6
Gohir.D12G203800 Gossypium hirsutum HOM05D005907 ORTHO05D007033 1.1e-27 127.5 170 39.4
Sp1g27370 Schrenkiella parvula HOM05D005907 ORTHO05D007033 1.4e-27 127.1 151 41.7
Phvul.002G122500 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 1.8e-27 126.7 165 37.0
SalBow8G0159 Salvia bowleyana HOM05D005907 ORTHO05D007033 3.1e-27 125.9 179 41.3
Thhalv10008873m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 4.1e-27 125.6 151 42.4
BraA08t33042Z Brassica rapa HOM05D005907 ORTHO05D007033 9.1e-27 124.4 155 43.2
Gohir.A12G201000 Gossypium hirsutum HOM05D005907 ORTHO05D007033 1.2e-26 124.0 173 39.9
Sp4g03880 Schrenkiella parvula HOM05D005907 ORTHO05D007033 2.7e-26 122.9 167 38.3
ATR0568G210 Amborella trichopoda HOM05D005907 ORTHO05D007033 5.9e-26 121.7 170 41.2
HanXRQChr08g0233691 Helianthus annuus HOM05D005907 ORTHO05D007033 5.9e-26 121.7 158 39.9
AT1G31720 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 8.6e-25 117.9 144 43.1
Aa31LG6G1970 Aethionema arabicum HOM05D005907 ORTHO05D007033 2.5e-24 116.3 166 38.0
BcaNung01784 Brassica carinata HOM05D005907 ORTHO05D007033 3.3e-24 115.9 152 40.1
ECA233G3754 Erigeron canadensis HOM05D005907 ORTHO05D007033 5.5e-24 115.2 147 42.9
Thhalv10026210m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 7.2e-24 114.8 170 39.4
AT4G19370 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 1.2e-23 114.0 163 40.5
Sc07g0008040 Simmondsia chinensis HOM05D005907 ORTHO05D007033 1.2e-23 114.0 116 46.6
Sp7g17980 Schrenkiella parvula HOM05D005907 ORTHO05D007033 1.6e-23 113.6 165 38.8
AL7G34790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 3.6e-23 112.5 161 39.1
BcaC09g51418 Brassica carinata HOM05D005907 ORTHO05D007033 3.6e-23 112.5 172 37.2
C01p13330 Brassica napus HOM05D005907 ORTHO05D007033 3.6e-23 112.5 172 37.2
BolC1t01308H Brassica oleracea HOM05D005907 ORTHO05D007033 3.6e-23 112.5 172 37.2
A01p11320 Brassica napus HOM05D005907 ORTHO05D007033 8.0e-23 111.3 172 36.6
BraA01t01076Z Brassica rapa HOM05D005907 ORTHO05D007033 8.0e-23 111.3 172 36.6
Carub.0007s2186 Capsella rubella HOM05D005907 ORTHO05D007033 1.8e-22 110.2 161 39.1
Cpa.g.c30909 Carica papaya HOM05D005907 ORTHO05D007033 1.8e-22 110.2 135 41.5
CARHR226160 Cardamine hirsuta HOM05D005907 ORTHO05D007033 5.2e-22 108.6 154 39.6
Phvul.003G278300 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 6.8e-22 108.2 151 40.4
VMungo0251G3198 Vigna mungo HOM05D005907 ORTHO05D007033 8.9e-22 107.8 172 34.9
SGA_v2.0_scaffold121G33056 Striga asiatica HOM05D005907 ORTHO05D007033 2.0e-21 106.7 170 37.1
CDE01G0013 Ceratophyllum demersum HOM05D005907 ORTHO05D007033 1.3e-20 104.0 161 37.3
Sed0021253 Sechium edule HOM05D005907 ORTHO05D007033 3.7e-20 102.4 119 42.0
Zm00001eb251950 Zea mays HOM05D005907 ORTHO05D007033 3.7e-20 102.4 126 43.7
EL10Ac5g12591 Beta vulgaris HOM05D005907 ORTHO05D007033 4.9e-20 102.1 165 36.4
unitig_37.g12906 Utricularia gibba HOM05D005907 ORTHO05D007033 1.2e-18 97.4 167 37.1
Os02g0703300 Oryza sativa ssp. japonica HOM05D005907 ORTHO05D007033 2.9e-17 92.8 132 39.4
Haze_08422 Corylus avellana HOM05D005907 ORTHO05D007033 2.5e-16 89.7 77 49.4
Haze_08421 Corylus avellana HOM05D005907 ORTHO05D007033 1.2e-15 87.4 97 48.5
Psat4g109120 Pisum sativum HOM05D005907 ORTHO05D007033 6.1e-15 85.1 133 36.1
Nitab4.5_0009213g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 1.4e-14 84.0 75 52.0
Peaxi162Scf00550g00429 Petunia axillaris HOM05D005907 ORTHO05D007033 3.4e-13 79.3 97 43.3
SEGI_15207 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 1.3e-12 77.4 140 35.7
MELO3C016217.2 Cucumis melo HOM05D005907 ORTHO05D007033 8.3e-12 74.7 83 56.6
Nitab4.5_0000943g0070 Nicotiana tabacum HOM05D005907 ORTHO05D007033 4.6e-10 68.9 65 49.2
ClCG11G016110 Citrullus lanatus HOM05D005907 ORTHO05D007033 1.0e-09 67.8 69 43.5
arahy.Tifrunner.gnm1.ann1.93DHY7 Arachis hypogaea HOM05D005907 ORTHO05D007033 1.3e-09 67.4 76 46.1
ClCG11G016120 Citrullus lanatus HOM05D005907 ORTHO05D007033 6.6e-09 65.1 106 34.9
SEGI_02785 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 6.6e-09 65.1 133 31.6
Aqoxy2G03476 Aquilegia oxysepala HOM05D005907 ORTHO05D007033 7.3e-08 61.6 97 39.2
PGSC0003DMG400001952 Solanum tuberosum HOM05D005907 ORTHO05D007033 1.2e-07 60.8 59 42.4
Lsat_1_v5_gn_6_17141 Lactuca sativa HOM05D005907 ORTHO05D007033 1.8e-06 57.0 80 38.8
PSO541G0036 Papaver somniferum HOM05D001850 ORTHO05D002241 8.9e-06 54.7 134 33.6
PSO675G8180 Papaver somniferum HOM05D001850 ORTHO05D002241 8.9e-06 54.7 134 33.6


User provided reference genes

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