Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01097 Eucalyptus grandis HOM05D005336 ORTHO05D006511 2.2e-74 282.3 159 100.0
Duzib068G0481 Durio zibethinus HOM05D005336 ORTHO05D006511 3.1e-31 139.0 120 60.8
TPR.G4515 Trifolium pratense HOM05D005336 ORTHO05D006511 5.2e-31 138.3 128 55.5
Psat1g195600 Pisum sativum HOM05D005336 ORTHO05D006511 7.6e-30 134.4 128 54.7
Ca_00460_v3 Cicer arietinum L. HOM05D005336 ORTHO05D006511 4.9e-29 131.7 130 54.6
Medtr2g016680 Medicago truncatula HOM05D005336 ORTHO05D006511 1.9e-28 129.8 117 57.3
COL.COLO4_10851 Corchorus olitorius HOM05D005336 ORTHO05D006511 5.4e-28 128.3 120 58.3
Gohir.A02G094800 Gossypium hirsutum HOM05D005336 ORTHO05D006511 1.6e-27 126.7 137 49.6
Gorai.003G073000 Gossypium raimondii HOM05D005336 ORTHO05D006511 4.6e-27 125.2 136 50.0
Lalb_Chr19g0129261 Lupinus albus HOM05D005336 ORTHO05D006511 1.7e-26 123.2 135 49.6
CiPaw.11G108200 Carya illinoinensis HOM05D005336 ORTHO05D006511 2.3e-26 122.9 122 54.1
Glyma.01G146800 Glycine max HOM05D005336 ORTHO05D006511 5.1e-26 121.7 113 54.0
Glyma.10G112800 Glycine max HOM05D005336 ORTHO05D006511 5.1e-26 121.7 113 54.0
Gohir.D03G088700 Gossypium hirsutum HOM05D005336 ORTHO05D006511 5.1e-26 121.7 136 49.3
Phvul.007G247100 Phaseolus vulgaris HOM05D005336 ORTHO05D006511 6.6e-26 121.3 131 51.1
PGR031G1780 Punica granatum HOM05D005336 ORTHO05D006511 6.6e-26 121.3 119 54.6
Thecc.03G215000 Theobroma cacao HOM05D005336 ORTHO05D006511 6.6e-26 121.3 133 52.6
Glyma.15G085000 Glycine max HOM05D005336 ORTHO05D006511 1.1e-25 120.6 130 51.5
Duzib205G0686 Durio zibethinus HOM05D005336 ORTHO05D006511 1.5e-25 120.2 120 53.3
QL12p003217 Quercus lobata HOM05D005336 ORTHO05D006511 1.5e-25 120.2 145 59.3
VMungo0720G3070 Vigna mungo HOM05D005336 ORTHO05D006511 1.9e-25 119.8 132 52.3
Manes.04G133300 Manihot esculenta HOM05D005336 ORTHO05D006511 5.6e-25 118.2 132 50.8
TWI15G0432 Tripterygium wilfordii HOM05D005336 ORTHO05D006511 9.6e-25 117.5 154 48.1
Haze_09222 Corylus avellana HOM05D005336 ORTHO05D006511 1.2e-24 117.1 122 50.0
Phvul.006G173850 Phaseolus vulgaris HOM05D005336 ORTHO05D006511 1.2e-24 117.1 136 50.7
TWI81G0214 Tripterygium wilfordii HOM05D005336 ORTHO05D006511 2.1e-24 116.3 126 54.0
Cfa011882 Carpinus fangiana HOM05D005336 ORTHO05D006511 2.8e-24 115.9 121 49.6
MD06G1125100 Malus domestica HOM05D005336 ORTHO05D006511 2.8e-24 115.9 133 46.6
Nitab4.5_0008499g0040 Nicotiana tabacum HOM05D005336 ORTHO05D006511 3.6e-24 115.5 141 46.8
Duzib084G1128 Durio zibethinus HOM05D005336 ORTHO05D006511 4.7e-24 115.2 120 52.5
Lj6g0026446 Lotus japonicus HOM05D005336 ORTHO05D006511 4.7e-24 115.2 117 51.3
CAN.G129.24 Capsicum annuum HOM05D005336 ORTHO05D006511 6.2e-24 114.8 125 47.2
Lj2P149T61 Lonicera japonica HOM05D005336 ORTHO05D006511 6.2e-24 114.8 129 51.9
Nitab4.5_0000960g0060 Nicotiana tabacum HOM05D005336 ORTHO05D006511 6.2e-24 114.8 125 47.2
Solyc01g066860.3 Solanum lycopersicum HOM05D005336 ORTHO05D006511 6.2e-24 114.8 141 45.4
Sopen01g028460 Solanum pennellii HOM05D005336 ORTHO05D006511 6.2e-24 114.8 141 45.4
FvH4_5g10310 Fragaria vesca HOM05D005336 ORTHO05D006511 8.1e-24 114.4 147 46.3
FAN18G0874 Fragaria x ananassa HOM05D005336 ORTHO05D006511 8.1e-24 114.4 147 46.3
PGSC0003DMG400044996 Solanum tuberosum HOM05D005336 ORTHO05D006511 1.1e-23 114.0 146 43.8
SGA_v2.0_scaffold71G23936 Striga asiatica HOM05D005336 ORTHO05D006511 1.4e-23 113.6 127 44.9
Prupe.5G135700 Prunus persica HOM05D005336 ORTHO05D006511 4.0e-23 112.1 160 46.9
FAN04G3153 Fragaria x ananassa HOM05D005336 ORTHO05D006511 5.2e-23 111.7 148 45.3
Glyma.13G227300 Glycine max HOM05D005336 ORTHO05D006511 6.8e-23 111.3 131 48.9
MSTRG.13689 Avicennia marina HOM05D005336 ORTHO05D006511 1.2e-22 110.5 138 47.1
ClCG07G008170 Citrullus lanatus HOM05D005336 ORTHO05D006511 1.2e-22 110.5 130 43.8
Gorai.008G261600 Gossypium raimondii HOM05D005336 ORTHO05D006511 1.5e-22 110.2 133 48.1
Sopen12g034260 Solanum pennellii HOM05D005336 ORTHO05D006511 1.5e-22 110.2 129 47.3
CsaV3_4G005910 Cucumis sativus L. HOM05D005336 ORTHO05D006511 2.0e-22 109.8 131 45.8
MD00G1118700 Malus domestica HOM05D005336 ORTHO05D006511 2.0e-22 109.8 131 47.3
RcHm_v2.0_Chr7g0187911 Rosa chinensis HOM05D005336 ORTHO05D006511 2.0e-22 109.8 173 40.5
FAN08G3085 Fragaria x ananassa HOM05D005336 ORTHO05D006511 2.6e-22 109.4 148 44.6
Gohir.A12G243100 Gossypium hirsutum HOM05D005336 ORTHO05D006511 3.4e-22 109.0 133 47.4
Gohir.D12G244100 Gossypium hirsutum HOM05D005336 ORTHO05D006511 3.4e-22 109.0 133 48.1
Solyc12g099590.1 Solanum lycopersicum HOM05D005336 ORTHO05D006511 9.9e-22 107.5 128 46.9
SGA_v2.0_scaffold99G29499 Striga asiatica HOM05D005336 ORTHO05D006511 1.3e-21 107.1 112 43.8
PGSC0003DMG400037636 Solanum tuberosum HOM05D005336 ORTHO05D006511 1.7e-21 106.7 114 48.2
Peaxi162Scf00498g00079 Petunia axillaris HOM05D005336 ORTHO05D006511 3.8e-21 105.5 124 45.2
Oeu026757.1 Olea europaea HOM05D005336 ORTHO05D006511 4.9e-21 105.1 138 43.5
Sed0023501 Sechium edule HOM05D005336 ORTHO05D006511 6.4e-21 104.8 113 43.4
Nn3g18754 Nelumbo nucifera HOM05D005336 ORTHO05D006511 1.1e-20 104.0 147 42.2
Potri.001G452900 Populus trichocarpa HOM05D005336 ORTHO05D006511 1.4e-20 103.6 140 48.6
VMungo0540G0063 Vigna mungo HOM05D005336 ORTHO05D006511 1.4e-20 103.6 130 48.5
MELO3C016357.2 Cucumis melo HOM05D005336 ORTHO05D006511 1.9e-20 103.2 133 45.1
DCAR_023826 Daucus carota HOM05D005336 ORTHO05D006511 1.9e-20 103.2 119 47.9
Sabra11G0134200 Salix brachista HOM05D005336 ORTHO05D006511 1.9e-20 103.2 131 48.9
Dinv11470 Davidia involucrata HOM05D005336 ORTHO05D006511 2.4e-20 102.8 133 46.6
CANSAT21G1898 Cannabis sativa HOM05D005336 ORTHO05D006511 3.2e-20 102.4 140 43.6
CiPaw.12G074100 Carya illinoinensis HOM05D005336 ORTHO05D006511 4.2e-20 102.1 137 46.0
Nitab4.5_0018124g0020 Nicotiana tabacum HOM05D005336 ORTHO05D006511 4.2e-20 102.1 111 48.6
BcaB01g01514 Brassica carinata HOM05D005336 ORTHO05D006511 7.1e-20 101.3 117 44.4
BraA09t38410Z Brassica rapa HOM05D005336 ORTHO05D006511 7.1e-20 101.3 108 45.4
FAN13G1264 Fragaria x ananassa HOM05D005336 ORTHO05D006511 9.3e-20 100.9 150 43.3
Sp6g06720 Schrenkiella parvula HOM05D005336 ORTHO05D006511 9.3e-20 100.9 117 43.6
Cc05_g01210 Coffea canephora HOM05D005336 ORTHO05D006511 1.2e-19 100.5 150 43.3
A09p28450 Brassica napus HOM05D005336 ORTHO05D006511 1.6e-19 100.1 108 44.4
CSS0030685 Camellia sinensis var. sinensis HOM05D005336 ORTHO05D006511 1.6e-19 100.1 144 42.4
THA.LOC104809289 Tarenaya hassleriana HOM05D005336 ORTHO05D006511 1.6e-19 100.1 124 46.8
unitig_62.g23264 Utricularia gibba HOM05D005336 ORTHO05D006511 1.6e-19 100.1 136 40.4
C09p36020 Brassica napus HOM05D005336 ORTHO05D006511 2.1e-19 99.8 108 45.4
BolC9t56436H Brassica oleracea HOM05D005336 ORTHO05D006511 2.1e-19 99.8 108 45.4
Potri.011G149100 Populus trichocarpa HOM05D005336 ORTHO05D006511 2.1e-19 99.8 124 46.0
A09p13620 Brassica napus HOM05D005336 ORTHO05D006511 3.5e-19 99.0 112 46.4
BraA09t37015Z Brassica rapa HOM05D005336 ORTHO05D006511 4.6e-19 98.6 112 46.4
Actinidia04156 Actinidia chinensis HOM05D005336 ORTHO05D006511 6.0e-19 98.2 121 43.8
Dinv08689 Davidia involucrata HOM05D005336 ORTHO05D006511 6.0e-19 98.2 93 51.6
THA.LOC104798383 Tarenaya hassleriana HOM05D005336 ORTHO05D006511 6.0e-19 98.2 100 52.0
THA.LOC104798386 Tarenaya hassleriana HOM05D005336 ORTHO05D006511 6.0e-19 98.2 100 52.0
arahy.Tifrunner.gnm1.ann1.GG3QCC Arachis hypogaea HOM05D005336 ORTHO05D006511 1.0e-18 97.4 138 42.8
arahy.Tifrunner.gnm1.ann1.W1T8WI Arachis hypogaea HOM05D005336 ORTHO05D006511 1.3e-18 97.1 137 42.3
SalBow1G3976 Salvia bowleyana HOM05D005336 ORTHO05D006511 1.7e-18 96.7 139 39.6
Lsat_1_v5_gn_8_120821 Lactuca sativa HOM05D005336 ORTHO05D006511 2.3e-18 96.3 137 40.1
BcaB07g31399 Brassica carinata HOM05D005336 ORTHO05D006511 3.0e-18 95.9 112 46.4
TAR375G0214 Trochodendron aralioides HOM05D005336 ORTHO05D006511 3.0e-18 95.9 136 41.9
BcaC04g22699 Brassica carinata HOM05D005336 ORTHO05D006511 3.9e-18 95.5 119 42.9
C09p16280 Brassica napus HOM05D005336 ORTHO05D006511 3.9e-18 95.5 119 42.9
BolC9t54538H Brassica oleracea HOM05D005336 ORTHO05D006511 3.9e-18 95.5 119 42.9
CARHR047990 Cardamine hirsuta HOM05D005336 ORTHO05D006511 3.9e-18 95.5 114 47.4
PSO675G0589 Papaver somniferum HOM05D005336 ORTHO05D006511 3.9e-18 95.5 136 43.4
AUR62001462 Chenopodium quinoa HOM05D005336 ORTHO05D006511 5.1e-18 95.1 144 38.2
Lsat_1_v5_gn_4_127821 Lactuca sativa HOM05D005336 ORTHO05D006511 5.1e-18 95.1 146 39.0
Aa31sc221G90 Aethionema arabicum HOM05D005336 ORTHO05D006511 8.7e-18 94.4 101 45.5
AUR62009906 Chenopodium quinoa HOM05D005336 ORTHO05D006511 8.7e-18 94.4 145 36.6
Rhsim02G0255200 Rhododendron simsii HOM05D005336 ORTHO05D006511 8.7e-18 94.4 146 39.7
CSS0006649 Camellia sinensis var. sinensis HOM05D005336 ORTHO05D006511 1.1e-17 94.0 131 42.0
ECA233G5147 Erigeron canadensis HOM05D005336 ORTHO05D006511 1.5e-17 93.6 128 41.4
HanXRQChr05g0144281 Helianthus annuus HOM05D005336 ORTHO05D006511 2.5e-17 92.8 139 41.7
Sabra16G0306000 Salix brachista HOM05D005336 ORTHO05D006511 2.5e-17 92.8 140 45.0
Cpa.g.sc62.61 Carica papaya HOM05D005336 ORTHO05D006511 4.3e-17 92.0 113 48.7
BcaB07g31580 Brassica carinata HOM05D005336 ORTHO05D006511 5.6e-17 91.7 112 44.6
Thhalv10029291m.g Eutrema salsugineum HOM05D005336 ORTHO05D006511 9.6e-17 90.9 134 38.8
AL2G11840 Arabidopsis lyrata HOM05D005336 ORTHO05D006511 1.6e-16 90.1 114 44.7
AT1G63310 Arabidopsis thaliana HOM05D005336 ORTHO05D006511 1.6e-16 90.1 114 44.7
A09p15530 Brassica napus HOM05D005336 ORTHO05D006511 1.6e-16 90.1 114 42.1
Ciclev10022546m.g Citrus clementina HOM05D005336 ORTHO05D006511 1.6e-16 90.1 136 41.2
Thhalv10023730m.g Eutrema salsugineum HOM05D005336 ORTHO05D006511 1.6e-16 90.1 146 37.0
C09p18780 Brassica napus HOM05D005336 ORTHO05D006511 2.1e-16 89.7 112 41.1
Actinidia27276 Actinidia chinensis HOM05D005336 ORTHO05D006511 2.8e-16 89.4 126 39.7
Carub.0002s0149 Capsella rubella HOM05D005336 ORTHO05D006511 4.8e-16 88.6 119 40.3
Sp2g01210 Schrenkiella parvula HOM05D005336 ORTHO05D006511 4.8e-16 88.6 114 43.9
BraA09t37193Z Brassica rapa HOM05D005336 ORTHO05D006511 6.2e-16 88.2 116 43.1
BcaC04g22484 Brassica carinata HOM05D005336 ORTHO05D006511 8.1e-16 87.8 114 41.2
BolC9t54780H Brassica oleracea HOM05D005336 ORTHO05D006511 8.1e-16 87.8 114 41.2
SalBow5G4925 Salvia bowleyana HOM05D005336 ORTHO05D006511 8.1e-16 87.8 122 39.3
Ah.15g095260 Amaranthus hybridus HOM05D005336 ORTHO05D006511 5.3e-15 85.1 121 41.3
Oeu011890.1 Olea europaea HOM05D005336 ORTHO05D006511 9.0e-15 84.3 85 49.4
Sc12g0010690 Simmondsia chinensis HOM05D005336 ORTHO05D006511 1.2e-14 84.0 156 37.2
MBI12_g05895_MAGBIO Magnolia biondii HOM05D005336 ORTHO05D006511 7.6e-14 81.3 102 43.1
PGR042G3248 Punica granatum HOM05D005336 ORTHO05D006511 1.3e-13 80.5 116 41.4
Ah.08g216960 Amaranthus hybridus HOM05D005336 ORTHO05D006511 3.8e-13 79.0 108 42.6
ATR0579G028 Amborella trichopoda HOM05D005336 ORTHO05D006511 7.1e-12 74.7 114 43.0
Actinidia22234 Actinidia chinensis HOM05D005336 ORTHO05D006511 9.3e-12 74.3 103 41.7
Glyma.02G159700 Glycine max HOM05D005336 ORTHO05D006511 6.0e-11 71.6 56 57.1
CDE11G0690 Ceratophyllum demersum HOM05D002676 ORTHO05D003194 1.0e-10 70.9 119 32.8
Atru.chr9.1827 Acer truncatum HOM05D005336 ORTHO05D006511 3.9e-10 68.9 41 68.3
Nn1g02007 Nelumbo nucifera HOM05D005336 ORTHO05D006511 5.6e-09 65.1 53 50.9
SEGI_10606 Sequoiadendron giganteum HOM05D005336 ORTHO05D006511 3.6e-08 62.4 85 45.9
Sed0017381 Sechium edule HOM05D004242 ORTHO05D004349 2.4e-07 59.7 119 29.4
CDE09G0230 Ceratophyllum demersum HOM05D005336 ORTHO05D006511 9.0e-07 57.8 125 28.8
Zm00001eb418860 Zea mays HOM05D005336 ORTHO05D006511 9.0e-07 57.8 96 36.5
SEGI_39402 Sequoiadendron giganteum HOM05D005336 ORTHO05D006511 1.2e-06 57.4 99 35.4
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 2.0e-06 56.6 116 30.2
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 4.5e-06 55.5 105 32.4
Lj8P558T23 Lonicera japonica HOM05D012621 ORTHO05D004349 5.8e-06 55.1 77 44.2
Lj8P558T18 Lonicera japonica HOM05D012621 ORTHO05D004349 7.6e-06 54.7 77 44.2
Zm00001eb089560 Zea mays HOM05D005336 ORTHO05D006511 9.9e-06 54.3 97 34.0


User provided reference genes

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