Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 2.2e-153 545.8 322 100.0
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 2.2e-81 306.6 320 55.0
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 2.5e-80 303.1 270 60.0
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 1.8e-78 297.0 313 59.1
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 5.2e-78 295.4 271 58.3
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 5.2e-78 295.4 271 58.3
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 8.8e-78 294.7 278 64.4
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 1.5e-77 293.9 275 60.7
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 1.3e-76 290.8 275 65.5
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 4.9e-76 288.9 267 58.4
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 4.9e-76 288.9 278 57.2
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 4.9e-76 288.9 278 57.2
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 4.1e-75 285.8 279 56.6
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 1.6e-74 283.9 278 56.5
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 4.5e-74 282.3 278 56.1
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 1.3e-73 280.8 253 67.6
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 5.0e-73 278.9 263 59.3
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 6.6e-73 278.5 256 58.6
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 6.6e-73 278.5 262 57.6
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 8.6e-73 278.1 262 57.6
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 1.5e-72 277.3 307 53.1
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 1.9e-72 276.9 271 62.0
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 1.9e-72 276.9 249 59.8
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 2.5e-72 276.6 257 58.4
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 1.0e-70 271.2 271 59.4
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 1.8e-70 270.4 261 66.7
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 3.0e-70 269.6 241 61.8
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 4.0e-70 269.2 274 57.3
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 6.8e-70 268.5 246 66.3
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 6.8e-70 268.5 309 51.5
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 8.9e-70 268.1 274 54.7
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 2.6e-69 266.5 318 51.6
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 3.4e-69 266.2 258 56.6
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 9.8e-69 264.6 273 55.7
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 9.8e-69 264.6 276 56.9
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.3e-68 264.2 276 57.6
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.3e-68 264.2 276 56.9
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 1.7e-68 263.8 286 53.8
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 2.9e-68 263.1 252 59.5
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 4.9e-68 262.3 269 59.5
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 8.3e-68 261.5 276 57.6
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 1.4e-67 260.8 272 55.9
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 1.8e-67 260.4 261 55.2
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.8e-67 260.4 274 55.8
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.8e-67 260.4 265 58.1
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 1.8e-67 260.4 256 60.9
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 3.2e-67 259.6 245 55.9
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 5.4e-67 258.8 277 53.1
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 7.0e-67 258.5 294 59.2
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 9.2e-67 258.1 255 54.1
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 9.2e-67 258.1 255 54.1
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 9.2e-67 258.1 255 54.1
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 2.0e-66 256.9 268 54.5
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 3.5e-66 256.1 273 53.8
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 4.6e-66 255.8 247 56.7
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 4.6e-66 255.8 313 50.2
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 1.0e-65 254.6 262 55.3
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 1.0e-65 254.6 274 52.6
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 6.6e-65 251.9 274 52.9
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 6.6e-65 251.9 289 50.5
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 6.6e-65 251.9 305 49.2
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 6.6e-65 251.9 310 49.0
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 6.6e-65 251.9 250 54.0
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 6.6e-65 251.9 261 56.3
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 1.1e-64 251.1 298 54.0
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.1e-64 251.1 238 60.5
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 1.9e-64 250.4 288 51.4
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 9.5e-64 248.1 271 51.7
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 1.6e-63 247.3 261 55.9
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 1.6e-63 247.3 275 50.5
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 2.8e-63 246.5 256 54.7
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 4.7e-63 245.7 306 49.0
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 6.2e-63 245.4 271 53.5
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 8.0e-63 245.0 242 63.6
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 1.4e-62 244.2 278 52.2
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 2.0e-61 240.4 254 52.4
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 2.6e-61 240.0 272 50.0
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 2.2e-60 236.9 242 54.5
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 3.7e-60 236.1 269 59.9
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 4.9e-60 235.7 251 52.6
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 6.4e-60 235.3 264 50.8
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.1e-59 234.6 269 51.3
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 4.1e-59 232.6 293 47.4
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 5.4e-59 232.3 269 59.1
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 7.8e-58 228.4 254 53.1
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 6.6e-57 225.3 247 57.1
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 1.1e-56 224.6 254 51.2
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 3.3e-56 223.0 249 52.2
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 7.3e-56 221.9 264 48.5
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 6.8e-54 215.3 233 53.6
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 7.5e-53 211.8 267 47.2
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 1.1e-51 208.0 232 54.7
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 7.1e-51 205.3 229 52.0
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 2.1e-50 203.8 262 51.9
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 2.7e-50 203.4 198 56.1
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 4.6e-50 202.6 244 49.2
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 5.1e-49 199.1 257 54.1
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 8.6e-49 198.4 224 58.5
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 2.6e-45 186.8 276 46.0
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 3.5e-42 176.4 138 61.6
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 3.3e-40 169.9 241 53.1
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 4.4e-37 159.5 157 54.1
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 1.9e-35 154.1 224 42.9
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 1.8e-30 137.5 244 36.5
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 6.9e-30 135.6 160 48.1
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 1.2e-29 134.8 219 40.6
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 6.4e-28 129.0 267 35.6
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 2.4e-27 127.1 167 50.3
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 2.7e-26 123.6 100 62.0
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 1.1e-24 118.2 155 49.0
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 9.9e-21 105.1 148 40.5
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 7.1e-19 99.0 138 40.6
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 2.3e-17 94.0 77 66.2
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 3.0e-17 93.6 292 29.5
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 1.9e-16 90.9 289 29.1
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 8.1e-15 85.5 98 48.0
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 4.9e-12 76.3 310 30.0
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 3.0e-09 67.0 252 32.1
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.5e-08 63.9 58 53.4
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 5.7e-08 62.8 152 36.2


User provided reference genes

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