Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00996 Eucalyptus grandis HOM05D003949 ORTHO05D004504 2.4e-110 402.1 196 100.0
Atru.chr13.1594 Acer truncatum HOM05D003949 ORTHO05D004504 1.6e-21 107.1 185 36.8
Aqoxy117s002 Aquilegia oxysepala HOM05D003949 ORTHO05D004504 2.7e-21 106.3 185 37.8
Aqoxy3G01750 Aquilegia oxysepala HOM05D003949 ORTHO05D004504 2.7e-21 106.3 185 37.8
Duzib041G0733 Durio zibethinus HOM05D003949 ORTHO05D004504 3.5e-21 105.9 185 36.8
AL6G42240 Arabidopsis lyrata HOM05D003949 ORTHO05D004504 4.6e-21 105.5 200 34.0
BcaC01g04773 Brassica carinata HOM05D003949 ORTHO05D004504 4.6e-21 105.5 199 36.2
BolC3t15703H Brassica oleracea HOM05D003949 ORTHO05D004504 4.6e-21 105.5 199 36.2
Thhalv10028837m.g Eutrema salsugineum HOM05D003949 ORTHO05D004504 4.6e-21 105.5 197 36.0
AT4G08455 Arabidopsis thaliana HOM05D003949 ORTHO05D004504 6.0e-21 105.1 200 34.5
A03p28040 Brassica napus HOM05D003949 ORTHO05D004504 7.9e-21 104.8 200 36.0
BraA03t12017Z Brassica rapa HOM05D003949 ORTHO05D004504 7.9e-21 104.8 200 36.0
Carub.0006s2698 Capsella rubella HOM05D003949 ORTHO05D004504 1.0e-20 104.4 201 33.8
BcaB01g02864 Brassica carinata HOM05D003949 ORTHO05D004504 1.3e-20 104.0 200 36.0
Duzib093G1312 Durio zibethinus HOM05D003949 ORTHO05D004504 1.8e-20 103.6 190 35.3
Glyma.04G244900 Glycine max HOM05D003949 ORTHO05D004504 1.8e-20 103.6 178 37.1
Potri.005G183600 Populus trichocarpa HOM05D003949 ORTHO05D004504 1.8e-20 103.6 199 34.2
Sp6g09480 Schrenkiella parvula HOM05D003949 ORTHO05D004504 1.8e-20 103.6 181 37.0
EL10Ac1g01369 Beta vulgaris HOM05D003949 ORTHO05D004504 2.3e-20 103.2 186 36.0
Gohir.A05G269300 Gossypium hirsutum HOM05D003949 ORTHO05D004504 2.3e-20 103.2 186 36.0
QL09p032129 Quercus lobata HOM05D003949 ORTHO05D004504 3.0e-20 102.8 186 36.6
AUR62007697 Chenopodium quinoa HOM05D003949 ORTHO05D004504 3.9e-20 102.4 186 35.5
FAN15G0925 Fragaria x ananassa HOM05D003949 ORTHO05D004504 3.9e-20 102.4 177 39.5
FAN15G2352 Fragaria x ananassa HOM05D003949 ORTHO05D004504 3.9e-20 102.4 177 39.5
QL09p031595 Quercus lobata HOM05D003949 ORTHO05D004504 3.9e-20 102.4 186 36.6
vmacro00872 Vaccinium macrocarpon HOM05D003949 ORTHO05D004504 3.9e-20 102.4 183 37.2
FvH4_2g28021 Fragaria vesca HOM05D003949 ORTHO05D004504 6.7e-20 101.7 177 39.0
FAN20G1921 Fragaria x ananassa HOM05D003949 ORTHO05D004504 6.7e-20 101.7 177 39.0
FAN24G2840 Fragaria x ananassa HOM05D003949 ORTHO05D004504 6.7e-20 101.7 177 39.0
Gohir.D05G271200 Gossypium hirsutum HOM05D003949 ORTHO05D004504 6.7e-20 101.7 186 36.0
Gorai.009G284100 Gossypium raimondii HOM05D003949 ORTHO05D004504 6.7e-20 101.7 186 36.0
Lsat_1_v5_gn_1_7940 Lactuca sativa HOM05D003949 ORTHO05D004504 6.7e-20 101.7 191 36.1
Aa31LG9G14160 Aethionema arabicum HOM05D003949 ORTHO05D004504 8.7e-20 101.3 196 34.7
Glyma.06G118200 Glycine max HOM05D003949 ORTHO05D004504 8.7e-20 101.3 172 37.2
MD15G1132500 Malus domestica HOM05D003949 ORTHO05D004504 8.7e-20 101.3 176 35.8
Cfa018416 Carpinus fangiana HOM05D003949 ORTHO05D004504 1.1e-19 100.9 195 34.9
Ciclev10002113m.g Citrus clementina HOM05D003949 ORTHO05D004504 1.1e-19 100.9 188 34.6
Psat5g084280 Pisum sativum HOM05D003949 ORTHO05D004504 1.1e-19 100.9 175 35.4
Haze_17645 Corylus avellana HOM05D003949 ORTHO05D004504 1.9e-19 100.1 196 34.2
QL09p032138 Quercus lobata HOM05D003949 ORTHO05D004504 1.9e-19 100.1 174 37.9
TWI32G1346 Tripterygium wilfordii HOM05D003949 ORTHO05D004504 1.9e-19 100.1 204 34.8
CSS0001496 Camellia sinensis var. sinensis HOM05D003949 ORTHO05D004504 2.5e-19 99.8 181 35.9
FAN27G1067 Fragaria x ananassa HOM05D003949 ORTHO05D004504 2.5e-19 99.8 177 37.9
Manes.18G083500 Manihot esculenta HOM05D003949 ORTHO05D004504 2.5e-19 99.8 186 35.5
Prupe.1G487700 Prunus persica HOM05D003949 ORTHO05D004504 2.5e-19 99.8 183 38.3
TWI34G1744 Tripterygium wilfordii HOM05D003949 ORTHO05D004504 2.5e-19 99.8 168 35.7
Cpa.g.sc64.155 Carica papaya HOM05D003949 ORTHO05D004504 3.3e-19 99.4 169 35.5
Potri.002G077000 Populus trichocarpa HOM05D003949 ORTHO05D004504 3.3e-19 99.4 198 34.8
GSVIVG01008796001 Vitis vinifera HOM05D003949 ORTHO05D004504 3.3e-19 99.4 180 37.2
CARHR259500 Cardamine hirsuta HOM05D003949 ORTHO05D004504 4.3e-19 99.0 179 36.3
Lj4A674G53 Lonicera japonica HOM05D003949 ORTHO05D004504 4.3e-19 99.0 196 35.2
Thecc.08G134300 Theobroma cacao HOM05D003949 ORTHO05D004504 4.3e-19 99.0 175 37.1
THA.LOC104808256 Tarenaya hassleriana HOM05D003949 ORTHO05D004504 5.7e-19 98.6 189 33.9
COL.COLO4_36870 Corchorus olitorius HOM05D003949 ORTHO05D004504 7.4e-19 98.2 175 36.6
MBI06_g32174_MAGBIO Magnolia biondii HOM05D003949 ORTHO05D004504 7.4e-19 98.2 190 34.2
Ah.05g169030 Amaranthus hybridus HOM05D003949 ORTHO05D004504 9.7e-19 97.8 187 35.3
CiPaw.16G022200 Carya illinoinensis HOM05D003949 ORTHO05D004504 9.7e-19 97.8 171 39.2
MELO3C015709.2 Cucumis melo HOM05D003949 ORTHO05D004504 9.7e-19 97.8 210 32.9
Eucgr.E00983 Eucalyptus grandis HOM05D003949 ORTHO05D004504 1.3e-18 97.4 205 32.7
Sed0003495 Sechium edule HOM05D003949 ORTHO05D004504 1.3e-18 97.4 206 35.4
Sed0004108 Sechium edule HOM05D003949 ORTHO05D004504 1.3e-18 97.4 199 35.2
unitig_26.g9909 Utricularia gibba HOM05D003949 ORTHO05D004504 1.3e-18 97.4 188 36.2
Rhsim11G0072500 Rhododendron simsii HOM05D003949 ORTHO05D004504 1.6e-18 97.1 190 35.3
Migut.N03257 Erythranthe guttata HOM05D003949 ORTHO05D004504 2.2e-18 96.7 195 34.9
Medtr3g088660 Medicago truncatula HOM05D003949 ORTHO05D004504 2.2e-18 96.7 185 34.1
Cc10_g13590 Coffea canephora HOM05D003949 ORTHO05D004504 2.8e-18 96.3 182 34.6
CsaV3_7G022150 Cucumis sativus L. HOM05D003949 ORTHO05D004504 2.8e-18 96.3 210 32.9
ECA248G3438 Erigeron canadensis HOM05D003949 ORTHO05D004504 2.8e-18 96.3 189 33.9
unitig_749.g13929 Utricularia gibba HOM05D003949 ORTHO05D004504 2.8e-18 96.3 190 36.8
Lj1g0017464 Lotus japonicus HOM05D003949 ORTHO05D004504 3.7e-18 95.9 163 36.2
HanXRQChr02g0045541 Helianthus annuus HOM05D003949 ORTHO05D004504 4.8e-18 95.5 179 34.6
MSTRG.1405 Avicennia marina HOM05D003949 ORTHO05D004504 6.3e-18 95.1 188 35.1
ClCG09G021850 Citrullus lanatus HOM05D003949 ORTHO05D004504 6.3e-18 95.1 210 32.9
Nn1g08941 Nelumbo nucifera HOM05D003949 ORTHO05D004504 6.3e-18 95.1 176 34.1
PSO170G4419 Papaver somniferum HOM05D003949 ORTHO05D004504 6.3e-18 95.1 168 37.5
PGR042G2128 Punica granatum HOM05D003949 ORTHO05D004504 6.3e-18 95.1 183 34.4
CDE02G1310 Ceratophyllum demersum HOM05D003949 ORTHO05D004504 8.2e-18 94.7 176 36.4
Eucgr.E00988 Eucalyptus grandis HOM05D003949 ORTHO05D004504 1.4e-17 94.0 191 33.0
Lalb_Chr11g0066221 Lupinus albus HOM05D003949 ORTHO05D004504 1.4e-17 94.0 181 35.4
Actinidia33635 Actinidia chinensis HOM05D003949 ORTHO05D004504 1.8e-17 93.6 197 34.0
PSO528G0283 Papaver somniferum HOM05D003949 ORTHO05D004504 1.8e-17 93.6 168 36.9
VMungo1309G1661 Vigna mungo HOM05D003949 ORTHO05D004504 2.4e-17 93.2 175 33.1
Actinidia03427 Actinidia chinensis HOM05D003949 ORTHO05D004504 3.1e-17 92.8 195 34.4
Hma1.2p1_1732F.1_g299770 Hydrangea macrophylla HOM05D003949 ORTHO05D004504 4.1e-17 92.4 194 34.0
Solyc02g032510.3 Solanum lycopersicum HOM05D003949 ORTHO05D004504 5.3e-17 92.0 175 36.6
MD15G1132600 Malus domestica HOM05D003949 ORTHO05D004504 6.9e-17 91.7 163 38.0
Thhalv10023183m.g Eutrema salsugineum HOM05D003949 ORTHO05D004504 9.0e-17 91.3 170 35.9
SGA_v2.0_scaffold28G11965 Striga asiatica HOM05D003949 ORTHO05D004504 9.0e-17 91.3 196 34.2
Migut.C01075 Erythranthe guttata HOM05D003949 ORTHO05D004504 1.2e-16 90.9 188 33.0
Sc15g0007490 Simmondsia chinensis HOM05D003949 ORTHO05D004504 1.2e-16 90.9 180 33.9
Actinidia29493 Actinidia chinensis HOM05D003949 ORTHO05D004504 1.5e-16 90.5 189 35.4
Sopen02g010800 Solanum pennellii HOM05D003949 ORTHO05D004504 2.6e-16 89.7 186 33.9
TPR.G6334 Trifolium pratense HOM05D003949 ORTHO05D004504 2.6e-16 89.7 148 37.2
CAN.G215.13 Capsicum annuum HOM05D003949 ORTHO05D004504 4.5e-16 89.0 191 34.0
Duzib116G0071 Durio zibethinus HOM05D003949 ORTHO05D004504 4.5e-16 89.0 187 35.3
DCAR_003593 Daucus carota HOM05D003949 ORTHO05D004504 5.9e-16 88.6 173 32.9
Nitab4.5_0000389g0100 Nicotiana tabacum HOM05D003949 ORTHO05D004504 5.9e-16 88.6 196 33.7
Phvul.009G130700 Phaseolus vulgaris HOM05D003949 ORTHO05D004504 5.9e-16 88.6 162 34.0
Dinv14706 Davidia involucrata HOM05D003949 ORTHO05D004504 7.7e-16 88.2 184 33.7
Ca_16616_v3 Cicer arietinum L. HOM05D003949 ORTHO05D004504 1.3e-15 87.4 195 31.8
PGR042G1779 Punica granatum HOM05D003949 ORTHO05D004504 1.3e-15 87.4 174 33.3
Dinv27260 Davidia involucrata HOM05D003949 ORTHO05D004504 2.2e-15 86.7 184 33.2
Prupe.1G487900 Prunus persica HOM05D003949 ORTHO05D004504 2.2e-15 86.7 183 32.2
Prupe.1G488300 Prunus persica HOM05D003949 ORTHO05D004504 2.2e-15 86.7 142 39.4
Nitab4.5_0000005g0360 Nicotiana tabacum HOM05D003949 ORTHO05D004504 2.9e-15 86.3 196 33.7
SEGI_15749 Sequoiadendron giganteum HOM05D003949 ORTHO05D004504 2.9e-15 86.3 179 36.3
Prupe.1G488200 Prunus persica HOM05D003949 ORTHO05D004504 5.0e-15 85.5 168 35.7
Peaxi162Scf00565g00310 Petunia axillaris HOM05D003949 ORTHO05D004504 6.5e-15 85.1 201 31.8
C03p33900 Brassica napus HOM05D003949 ORTHO05D004504 1.1e-14 84.3 158 36.1
Prupe.1G488400 Prunus persica HOM05D003949 ORTHO05D004504 4.2e-14 82.4 169 33.7
Prupe.1G488100 Prunus persica HOM05D003949 ORTHO05D004504 5.5e-14 82.0 168 33.3
Thhalv10016014m.g Eutrema salsugineum HOM05D003949 ORTHO05D004504 9.4e-14 81.3 170 32.4
Prupe.2G185900 Prunus persica HOM05D003949 ORTHO05D004504 9.4e-14 81.3 173 32.4
Prupe.1G488000 Prunus persica HOM05D003949 ORTHO05D004504 1.2e-13 80.9 168 31.5
Thhalv10029206m.g Eutrema salsugineum HOM05D003949 ORTHO05D004504 1.6e-13 80.5 166 33.1
Sabra02G0060500 Salix brachista HOM05D003949 ORTHO05D004504 1.6e-13 80.5 185 33.0
Os07g0258700 Oryza sativa ssp. japonica HOM05D003949 ORTHO05D004504 2.1e-13 80.1 182 31.9
ATR1001G004 Amborella trichopoda HOM05D003949 ORTHO05D004504 4.6e-13 79.0 181 32.6
Eucgr.E00993 Eucalyptus grandis HOM05D003949 ORTHO05D004504 3.9e-12 75.9 107 42.1
Eucgr.E00994 Eucalyptus grandis HOM05D003949 ORTHO05D004504 3.9e-12 75.9 124 39.5
Gohir.D02G077400 Gossypium hirsutum HOM05D003949 ORTHO05D004504 3.9e-12 75.9 113 38.9
CANSAT56G1102 Cannabis sativa HOM05D003949 ORTHO05D004504 5.1e-12 75.5 164 32.9
Eucgr.L00420 Eucalyptus grandis HOM05D003949 ORTHO05D004504 5.1e-12 75.5 111 39.6
Prupe.2G186000 Prunus persica HOM05D003949 ORTHO05D004504 6.7e-12 75.1 174 33.9
HPP92_003126 Vanilla planifolia HOM05D003949 ORTHO05D004504 1.1e-11 74.3 163 31.3
AUR62013445 Chenopodium quinoa HOM05D003949 ORTHO05D004504 4.3e-11 72.4 98 41.8
Sp6g09470 Schrenkiella parvula HOM05D003949 ORTHO05D004504 5.7e-11 72.0 171 31.6
CiPaw.15G030200 Carya illinoinensis HOM05D003949 ORTHO05D004504 7.4e-11 71.6 186 32.3
Actinidia28678 Actinidia chinensis HOM05D003949 ORTHO05D004504 1.7e-10 70.5 141 35.5
Actinidia33356 Actinidia chinensis HOM05D003949 ORTHO05D004504 2.2e-10 70.1 186 31.2
Eucgr.E00992 Eucalyptus grandis HOM05D003949 ORTHO05D004504 3.7e-10 69.3 163 31.3
Oeu047169.1 Olea europaea HOM05D003949 ORTHO05D004504 1.1e-09 67.8 94 41.5
Prupe.1G487800 Prunus persica HOM05D003949 ORTHO05D004504 1.8e-09 67.0 128 32.8
Actinidia04780 Actinidia chinensis HOM05D003949 ORTHO05D004504 1.5e-08 63.9 81 44.4
Gorai.005G086900 Gossypium raimondii HOM05D003949 ORTHO05D004504 4.5e-08 62.4 112 34.8
Sabra05G0139000 Salix brachista HOM05D003949 ORTHO05D004504 4.5e-08 62.4 198 27.3
Thhalv10011969m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 7.7e-08 61.6 123 31.7
AL8G21400 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 1.0e-07 61.2 111 29.7
Eucgr.L00413 Eucalyptus grandis HOM05D003949 ORTHO05D004504 1.0e-07 61.2 80 43.8
AL4G16510 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 3.8e-07 59.3 111 28.8
AT5G48510 Arabidopsis thaliana HOM05D002006 ORTHO05D002128 3.8e-07 59.3 111 28.8
THA.LOC104812138 Tarenaya hassleriana HOM05D002006 ORTHO05D002128 5.0e-07 58.9 113 33.6
Carub.0008s0809 Capsella rubella HOM05D002006 ORTHO05D002128 6.5e-07 58.5 110 31.8
AL6G53030 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 1.1e-06 57.8 106 35.8
BcaC04g24171 Brassica carinata HOM05D002006 ORTHO05D002128 1.1e-06 57.8 119 30.3
BcaC04g24175 Brassica carinata HOM05D002006 ORTHO05D002128 1.1e-06 57.8 119 30.3
C09p00370 Brassica napus HOM05D002006 ORTHO05D002128 1.1e-06 57.8 119 30.3
BolC3t15079H Brassica oleracea HOM05D002006 ORTHO05D002128 1.1e-06 57.8 111 27.9
BolC9t52972H Brassica oleracea HOM05D002006 ORTHO05D002128 1.1e-06 57.8 119 30.3
BraA09t35711Z Brassica rapa HOM05D002006 ORTHO05D002128 1.1e-06 57.8 119 30.3
AL8G21380 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 1.4e-06 57.4 98 32.7
AT2G40450 Arabidopsis thaliana HOM05D002006 ORTHO05D002128 1.4e-06 57.4 115 31.3
Duzib128G1589 Durio zibethinus HOM05D002006 ORTHO05D002128 1.4e-06 57.4 118 28.0
Thhalv10024159m.g Eutrema salsugineum HOM05D003949 ORTHO05D004504 1.4e-06 57.4 137 30.7
MD15G1132800 Malus domestica HOM05D003949 ORTHO05D004504 1.4e-06 57.4 80 40.0
C04p60210 Brassica napus HOM05D002006 ORTHO05D002128 1.9e-06 57.0 111 30.6
BolC4t27522H Brassica oleracea HOM05D002006 ORTHO05D002128 1.9e-06 57.0 111 30.6
Gohir.A02G070300 Gossypium hirsutum HOM05D003949 ORTHO05D004504 1.9e-06 57.0 150 29.3
Sp7g13200 Schrenkiella parvula HOM05D002006 ORTHO05D002128 1.9e-06 57.0 101 32.7
BcaC01g05401 Brassica carinata HOM05D002006 ORTHO05D002128 2.5e-06 56.6 110 27.3
C03p26970 Brassica napus HOM05D002006 ORTHO05D002128 2.5e-06 56.6 107 28.0
BolC3t15080H Brassica oleracea HOM05D002006 ORTHO05D002128 2.5e-06 56.6 110 27.3
Carub.0004s2270 Capsella rubella HOM05D002006 ORTHO05D002128 2.5e-06 56.6 133 24.1
CARHR135560 Cardamine hirsuta HOM05D002006 ORTHO05D002128 2.5e-06 56.6 107 30.8
Duzib106G1806 Durio zibethinus HOM05D002006 ORTHO05D002128 2.5e-06 56.6 118 28.8
PSO384G5144 Papaver somniferum HOM05D002006 ORTHO05D002128 2.5e-06 56.6 101 33.7
A09p00490 Brassica napus HOM05D002006 ORTHO05D002128 3.2e-06 56.2 119 30.3
Oeu013020.1 Olea europaea HOM05D002322 ORTHO05D002536 3.2e-06 56.2 109 33.0
Eucgr.E00984 Eucalyptus grandis HOM05D003949 ORTHO05D004504 4.2e-06 55.8 99 37.4
Gohir.A05G401700 Gossypium hirsutum HOM05D002006 ORTHO05D002128 4.2e-06 55.8 181 25.4
AL4G38280 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 5.5e-06 55.5 106 32.1
Sp4g22790 Schrenkiella parvula HOM05D002006 ORTHO05D002128 5.5e-06 55.5 115 30.4
BcaB01g02249 Brassica carinata HOM05D002006 ORTHO05D002128 7.2e-06 55.1 119 28.6
C03p26980 Brassica napus HOM05D002006 ORTHO05D002128 9.4e-06 54.7 110 27.3
Thhalv10017253m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 9.4e-06 54.7 110 29.1
Thhalv10017581m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 9.4e-06 54.7 114 29.8
THA.LOC104824594 Tarenaya hassleriana HOM05D002006 ORTHO05D002128 9.4e-06 54.7 124 33.9


User provided reference genes

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