Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 5.3e-145 517.7 268 100.0
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.7e-138 496.1 301 88.4
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 3.9e-95 352.1 300 63.7
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 5.6e-94 348.2 299 61.9
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 2.4e-92 342.8 299 61.2
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 5.3e-92 341.7 304 59.2
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 6.9e-92 341.3 228 81.6
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 2.9e-90 335.9 301 61.8
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 8.4e-90 334.3 285 61.8
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 5.4e-89 331.6 285 62.1
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 7.1e-89 331.3 285 61.1
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.2e-88 330.5 300 58.3
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 2.7e-88 329.3 298 59.4
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.6e-88 328.6 287 60.6
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 2.3e-87 326.2 267 64.0
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 3.9e-87 325.5 287 60.3
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 3.9e-87 325.5 285 59.6
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 4.3e-86 322.0 283 59.7
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 5.6e-86 321.6 281 60.1
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 5.6e-86 321.6 299 59.5
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 9.6e-86 320.9 304 55.3
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 1.3e-85 320.5 287 61.3
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 2.4e-84 316.2 304 54.3
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 4.0e-84 315.5 304 55.6
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 9.0e-84 314.3 307 57.0
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 9.0e-84 314.3 300 58.0
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 2.0e-83 313.2 300 56.7
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.5e-83 312.0 269 60.6
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 7.6e-83 311.2 285 59.6
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 7.6e-83 311.2 301 56.8
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 2.9e-82 309.3 294 57.1
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 4.9e-82 308.5 299 56.9
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 1.1e-81 307.4 285 58.9
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 3.2e-81 305.8 306 55.6
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 3.2e-81 305.8 285 58.6
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 3.5e-80 302.4 300 57.0
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 4.6e-80 302.0 300 57.3
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 1.8e-79 300.1 272 58.8
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 1.8e-79 300.1 287 56.8
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 3.9e-79 298.9 285 57.2
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 1.9e-78 296.6 307 54.1
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 4.3e-78 295.4 301 54.2
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 4.3e-78 295.4 299 53.8
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 9.6e-78 294.3 276 59.8
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.6e-78 294.3 306 56.5
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.6e-77 293.5 270 59.3
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 1.6e-77 293.5 299 54.8
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 6.2e-77 291.6 267 58.8
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 6.2e-77 291.6 288 55.9
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 8.1e-77 291.2 305 53.8
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.1e-76 290.8 296 54.4
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 1.4e-76 290.4 291 55.0
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 6.9e-76 288.1 286 55.6
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 1.2e-75 287.3 304 52.6
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 2.0e-75 286.6 302 53.0
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.0e-75 286.6 307 54.4
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 2.6e-75 286.2 289 53.3
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 2.6e-75 286.2 289 53.3
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 2.6e-75 286.2 304 54.6
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 5.8e-75 285.0 289 55.0
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 7.6e-75 284.6 307 53.1
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 7.6e-75 284.6 300 53.0
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 1.3e-74 283.9 298 53.7
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 1.1e-73 280.8 292 53.1
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 5.5e-73 278.5 304 52.6
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 7.1e-73 278.1 304 49.7
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 9.3e-73 277.7 300 50.7
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 1.2e-72 277.3 265 55.5
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 3.5e-72 275.8 301 52.5
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 3.0e-71 272.7 308 51.6
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 1.9e-70 270.0 266 53.0
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.3e-69 267.3 285 53.7
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.3e-69 267.3 285 53.7
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.6e-69 266.9 282 51.4
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.1e-68 264.2 295 47.8
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 2.4e-68 263.1 296 50.7
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 6.9e-68 261.5 295 47.1
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 1.2e-67 260.8 296 49.0
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 2.6e-67 259.6 286 52.4
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.0e-66 257.7 305 49.2
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 3.8e-66 255.8 266 54.1
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 4.9e-66 255.4 304 48.0
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.4e-65 253.8 293 51.2
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.5e-65 253.1 285 52.3
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 2.5e-65 253.1 290 50.0
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 3.2e-65 252.7 311 47.6
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 4.2e-65 252.3 210 63.3
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 5.5e-65 251.9 363 42.7
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 9.3e-65 251.1 300 48.0
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 1.2e-64 250.8 332 44.9
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 1.2e-64 250.8 265 51.3
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.6e-64 250.4 367 44.1
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 3.5e-64 249.2 383 41.0
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 3.5e-64 249.2 306 45.4
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 1.8e-63 246.9 265 50.2
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 5.1e-63 245.4 287 49.1
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.5e-62 243.8 264 50.4
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 1.3e-61 240.7 247 52.2
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 3.7e-61 239.2 265 47.9
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.8e-61 238.8 237 54.0
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 6.3e-61 238.4 299 47.2
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 6.3e-61 238.4 264 50.0
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 8.2e-61 238.0 273 50.9
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 1.1e-60 237.7 264 50.8
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 1.4e-60 237.3 299 47.2
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 1.8e-60 236.9 279 49.8
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 1.8e-60 236.9 263 51.3
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.8e-60 236.9 266 50.0
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 5.3e-60 235.3 280 51.4
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.3e-60 235.3 299 44.1
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 5.3e-60 235.3 267 49.1
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.3e-60 235.3 230 57.8
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 2.0e-59 233.4 277 49.5
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 2.0e-59 233.4 247 51.4
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 3.4e-59 232.6 310 46.5
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 4.5e-59 232.3 266 47.7
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 4.5e-59 232.3 298 45.3
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 4.5e-59 232.3 300 46.7
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 4.5e-59 232.3 300 46.7
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 1.3e-58 230.7 250 49.6
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 2.2e-58 229.9 289 44.3
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.0e-58 228.8 266 47.7
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 1.1e-57 227.6 257 49.8
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 1.4e-57 227.3 278 45.7
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 4.2e-57 225.7 247 49.4
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 1.6e-56 223.8 353 41.9
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 2.1e-56 223.4 247 49.8
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 2.7e-56 223.0 247 49.4
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 3.6e-56 222.6 225 56.4
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 5.1e-55 218.8 299 43.1
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 1.1e-54 217.6 261 47.9
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 2.2e-53 213.4 301 41.5
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 6.3e-53 211.8 258 47.7
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 8.2e-53 211.5 301 41.9
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 2.4e-52 209.9 289 45.0
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 9.1e-52 208.0 225 50.7
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 5.9e-51 205.3 232 50.0
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 1.7e-50 203.8 263 44.9
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 5.0e-50 202.2 247 45.3
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.0e-50 202.2 263 47.5
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 6.5e-50 201.8 215 51.2
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.9e-49 200.3 274 44.2
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 3.6e-48 196.1 252 45.6
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 6.1e-48 195.3 237 46.8
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 3.0e-47 193.0 240 45.4
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 3.9e-47 192.6 270 44.4
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 1.5e-46 190.7 273 42.1
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 2.0e-46 190.3 244 43.4
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 8.2e-45 184.9 225 45.8
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 2.4e-44 183.3 254 42.5
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.7e-42 177.2 144 64.6
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 3.8e-42 176.0 294 37.8
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 6.5e-42 175.3 222 44.6
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 1.2e-30 137.9 149 51.0
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 3.1e-28 129.8 200 38.5
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.1e-28 129.8 126 57.9
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 3.8e-26 122.9 108 59.3
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 7.2e-25 118.6 98 64.3
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 4.4e-22 109.4 84 69.0
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 8.3e-21 105.1 226 31.9
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 8.0e-16 88.6 207 33.3
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 6.8e-15 85.5 83 60.2
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 5.7e-14 82.4 99 47.5
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 7.5e-14 82.0 112 40.2
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 5.9e-11 72.4 72 50.0
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 6.1e-08 62.4 42 83.3
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.4e-07 61.2 68 55.9
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.2e-07 59.3 59 45.8
HPP92_027487 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.4e-06 56.6 48 66.7


User provided reference genes

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