Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-102 376.3 184 100.0
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.5e-101 370.9 184 98.9
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 7.8e-95 350.5 182 93.4
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-89 333.2 163 100.0
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.5e-85 317.0 174 90.8
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.1e-84 315.8 174 89.7
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.0e-84 313.9 174 89.1
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.3e-81 303.9 174 86.8
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-78 296.6 206 74.8
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.4e-72 274.6 139 95.0
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.1e-67 258.8 147 86.4
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.5e-66 256.5 188 72.3
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.2e-60 234.6 115 95.7
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 7.4e-45 184.5 172 56.4
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 2.6e-42 176.0 172 51.7
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 3.5e-39 165.6 177 52.0
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 8.7e-38 161.0 162 51.9
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 3.1e-35 152.5 168 47.6
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 3.1e-35 152.5 175 49.7
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 4.1e-35 152.1 169 46.2
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 1.5e-34 150.2 172 47.7
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 4.5e-34 148.7 172 48.8
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 5.8e-34 148.3 170 49.4
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 1.7e-33 146.7 166 50.0
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 2.2e-33 146.4 165 49.1
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 5.0e-33 145.2 166 47.6
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 2.5e-32 142.9 168 50.0
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 2.5e-32 142.9 166 48.2
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 5.5e-32 141.7 166 48.8
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 9.3e-32 141.0 171 48.0
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 1.2e-31 140.6 157 51.0
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 1.2e-31 140.6 175 48.0
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 1.2e-31 140.6 177 49.2
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 1.6e-31 140.2 177 49.2
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 3.5e-31 139.0 172 44.8
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 6.1e-31 138.3 162 47.5
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 7.9e-31 137.9 171 45.0
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 1.0e-30 137.5 170 44.1
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 1.3e-30 137.1 161 46.0
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 2.3e-30 136.3 159 47.8
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 2.3e-30 136.3 167 47.9
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 6.7e-30 134.8 169 47.3
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 8.7e-30 134.4 164 43.9
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 1.5e-29 133.7 166 45.2
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 2.5e-29 132.9 172 47.1
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 2.5e-29 132.9 171 45.0
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 5.7e-29 131.7 166 47.0
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 7.4e-29 131.3 172 44.2
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 9.7e-29 131.0 174 42.0
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.6e-28 130.2 172 45.9
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 1.6e-28 130.2 172 42.4
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 2.2e-28 129.8 169 45.0
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 6.3e-28 128.3 162 45.7
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 1.8e-27 126.7 166 44.6
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 1.8e-27 126.7 166 45.2
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 1.8e-27 126.7 152 47.4
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 2.4e-27 126.3 173 45.1
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 3.1e-27 125.9 161 44.1
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 3.1e-27 125.9 170 45.3
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 5.3e-27 125.2 159 45.9
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 9.0e-27 124.4 183 42.1
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 1.2e-26 124.0 172 40.1
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 1.2e-26 124.0 175 42.9
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 1.5e-26 123.6 157 46.5
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 4.5e-26 122.1 136 45.6
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 5.9e-26 121.7 160 45.6
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 1.0e-25 120.9 172 43.6
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 2.2e-25 119.8 160 46.9
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 1.9e-24 116.7 143 49.0
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 2.5e-24 116.3 175 40.6
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 5.5e-24 115.2 136 50.7
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 5.5e-24 115.2 179 41.3
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.2e-23 114.0 79 65.8
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 1.2e-23 114.0 166 39.2
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 1.6e-23 113.6 171 42.7
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.0e-22 109.4 77 72.7
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 3.9e-22 109.0 144 45.1
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 1.5e-21 107.1 167 41.3
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 5.7e-21 105.1 146 45.2
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 5.7e-21 105.1 79 60.8
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 9.7e-21 104.4 157 41.4
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.7e-20 103.6 95 48.4
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 1.7e-20 103.6 166 39.2
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 2.8e-20 102.8 146 43.8
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 4.8e-20 102.1 77 58.4
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 6.3e-20 101.7 146 44.5
Eucgr.E00710 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-19 100.9 76 68.4
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 1.4e-19 100.5 146 41.1
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 1.8e-19 100.1 76 57.9
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 7.7e-18 94.7 161 39.8
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 1.3e-17 94.0 79 58.2
Eucgr.E00971 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.8e-17 92.4 69 71.0
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 3.8e-17 92.4 76 55.3
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 6.5e-17 91.7 146 39.0
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 2.5e-16 89.7 79 51.9
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 4.2e-16 89.0 65 60.0
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 3.6e-15 85.9 164 35.4
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 3.6e-15 85.9 81 53.1
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 1.0e-14 84.3 137 37.2
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 1.0e-14 84.3 151 37.7
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 1.8e-14 83.6 114 40.4
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 2.3e-14 83.2 101 41.6
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 1.5e-13 80.5 122 41.0
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 2.0e-13 80.1 73 49.3
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 2.6e-13 79.7 135 39.3
Eucgr.H03760 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.3e-13 79.3 60 70.0
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.3e-12 75.1 100 39.0
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 2.4e-11 73.2 137 35.8
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 2.0e-10 70.1 80 41.2
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 2.6e-10 69.7 60 55.0
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 6.5e-09 65.1 75 50.7
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 6.5e-09 65.1 102 35.3
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 2.5e-08 63.2 111 32.4
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.2e-08 62.8 151 31.8
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 4.2e-08 62.4 48 60.4
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 4.2e-08 62.4 67 47.8
SHI06954 Sapria himalayana HOM05D000023 ORTHO05D000014 7.2e-08 61.6 108 37.0
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 1.6e-07 60.5 94 33.0
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 6.1e-07 58.5 89 33.7
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.0e-06 55.8 66 37.9


User provided reference genes

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