Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.3e-273 943.7 472 100.0
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.7e-261 904.0 471 96.2
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.7e-239 832.4 471 89.6
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-203 713.4 513 75.2
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.0e-126 456.8 293 80.2
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.4e-102 375.9 201 91.5
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 3.7e-101 372.9 472 45.6
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 3.2e-100 369.8 479 44.1
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 1.2e-99 367.9 473 46.9
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.9e-87 325.5 174 94.3
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 9.0e-87 325.1 470 41.7
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 2.6e-86 323.6 389 46.8
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 5.8e-86 322.4 384 45.8
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 4.9e-85 319.3 476 42.0
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.9e-85 319.3 484 39.9
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 8.4e-85 318.5 382 47.4
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 1.4e-84 317.8 465 41.5
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.0e-83 312.4 174 89.1
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.9e-82 309.7 163 92.6
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 8.7e-82 308.5 373 45.8
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.5e-81 307.0 174 87.9
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 9.6e-81 305.1 380 44.7
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 9.6e-81 305.1 418 42.8
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 2.1e-80 303.9 385 43.6
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 2.8e-80 303.5 395 45.8
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 2.4e-79 300.4 476 39.3
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 3.1e-79 300.1 476 40.5
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.9e-79 298.9 510 38.8
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 9.0e-79 298.5 469 39.7
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 1.5e-78 297.7 480 38.5
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 4.5e-78 296.2 370 46.2
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 6.4e-77 292.4 407 41.0
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 1.4e-76 291.2 472 38.1
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 7.9e-75 285.4 447 38.5
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 3.9e-74 283.1 371 42.3
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 3.9e-74 283.1 407 41.5
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 9.6e-73 278.5 468 37.4
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 2.8e-72 276.9 387 41.9
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 4.8e-72 276.2 386 41.5
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-71 274.6 139 95.7
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 4.0e-71 273.1 473 37.8
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 2.6e-70 270.4 397 40.8
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 3.4e-70 270.0 472 37.3
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 1.3e-69 268.1 474 37.3
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 2.2e-69 267.3 437 40.7
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 4.9e-69 266.2 379 42.5
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.4e-69 265.4 147 89.1
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 1.4e-68 264.6 376 39.6
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.1e-67 260.8 139 93.5
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 3.5e-67 260.0 476 36.3
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 3.5e-67 260.0 374 39.8
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.6e-67 259.6 140 90.0
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 4.6e-67 259.6 481 37.8
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 6.0e-67 259.2 370 40.3
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 2.3e-66 257.3 466 36.7
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 1.1e-65 255.0 474 36.5
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 5.3e-63 246.1 249 51.0
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 5.8e-62 242.7 309 46.9
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 6.5e-61 239.2 466 35.8
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 1.9e-60 237.7 380 38.9
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 2.7e-59 233.8 494 34.0
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.5e-59 233.4 115 96.5
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 1.1e-57 228.4 447 36.5
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 1.9e-57 227.6 384 38.0
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 2.2e-56 224.2 317 40.4
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 2.8e-56 223.8 499 33.1
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 1.1e-55 221.9 446 34.8
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 8.5e-53 212.2 495 30.7
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 8.5e-53 212.2 299 39.5
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 5.5e-52 209.5 244 48.0
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.2e-51 208.4 369 35.0
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 4.3e-49 199.9 255 44.7
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 5.7e-49 199.5 261 42.9
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 6.3e-48 196.1 258 43.8
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 1.1e-47 195.3 266 42.5
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 4.1e-47 193.4 266 41.7
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 2.0e-46 191.0 274 42.7
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 1.0e-45 188.7 295 40.7
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 2.0e-41 174.5 270 39.3
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 1.5e-38 164.9 283 39.2
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 3.8e-37 160.2 164 53.7
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 8.5e-37 159.1 213 44.1
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 1.1e-36 158.7 203 44.8
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.2e-36 156.8 340 33.2
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 1.8e-34 151.4 176 50.0
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 4.4e-33 146.7 246 35.8
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.2e-32 142.5 110 67.3
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 1.4e-31 141.7 177 46.3
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 5.9e-30 136.3 303 31.4
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 5.9e-30 136.3 148 50.7
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 3.2e-28 130.6 157 47.1
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 4.2e-28 130.2 244 34.4
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 1.2e-27 128.6 143 48.3
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 2.7e-27 127.5 157 47.1
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 1.0e-26 125.6 157 47.1
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 4.0e-26 123.6 157 46.5
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 8.8e-26 122.5 158 46.2
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 8.8e-26 122.5 241 31.1
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 4.4e-25 120.2 203 37.9
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 9.7e-25 119.0 159 45.9
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 1.7e-24 118.2 302 29.1
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.8e-24 117.5 73 71.2
Eucgr.E00704 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.3e-24 116.3 76 78.9
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 6.3e-24 116.3 126 48.4
Eucgr.E00945 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-23 115.5 76 76.3
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 7.0e-23 112.8 144 45.1
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 7.7e-22 109.4 146 46.6
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 2.2e-21 107.8 201 37.3
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 5.0e-21 106.7 146 45.2
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 8.5e-21 105.9 146 45.9
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.5e-20 105.1 77 71.4
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 5.5e-20 103.2 146 41.8
Eucgr.E00710 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.4e-20 102.4 76 68.4
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 1.8e-18 98.2 79 59.5
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 1.5e-17 95.1 146 40.4
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 3.4e-17 94.0 65 64.6
Eucgr.E00971 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.7e-17 93.2 69 72.5
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 8.3e-16 89.4 79 51.9
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 4.5e-14 83.6 168 36.9
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 5.0e-13 80.1 73 49.3
Eucgr.H03760 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-12 79.0 59 71.2
SHI06954 Sapria himalayana HOM05D000023 ORTHO05D000014 8.9e-10 69.3 108 41.7
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 7.5e-09 66.2 73 50.7
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 1.4e-07 62.0 48 60.4
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 2.0e-06 58.2 98 39.8
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 5.9e-06 56.6 75 40.0


User provided reference genes

Program Settings