Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00916 Eucalyptus grandis HOM05D000011 ORTHO05D005387 2.9e-61 238.4 123 100.0
Eucgr.E00958 Eucalyptus grandis HOM05D000011 ORTHO05D000018 5.5e-28 127.9 82 81.7
Eucgr.E00952 Eucalyptus grandis HOM05D000011 ORTHO05D000018 1.0e-26 123.6 82 76.8
Eucgr.E00733 Eucalyptus grandis HOM05D000011 ORTHO05D000018 1.6e-24 116.3 103 60.2
Eucgr.E00750 Eucalyptus grandis HOM05D000011 ORTHO05D000018 4.8e-24 114.8 82 72.0
Eucgr.J02285 Eucalyptus grandis HOM05D000011 ORTHO05D000018 6.3e-24 114.4 82 68.3
Eucgr.E00942 Eucalyptus grandis HOM05D000011 ORTHO05D000018 8.2e-24 114.0 82 72.0
Eucgr.E01015 Eucalyptus grandis HOM05D000011 ORTHO05D000018 8.2e-24 114.0 81 70.4
Eucgr.E00913 Eucalyptus grandis HOM05D000011 ORTHO05D000018 1.1e-23 113.6 82 70.7
Eucgr.E00680 Eucalyptus grandis HOM05D000011 ORTHO05D000018 1.4e-23 113.2 101 60.4
Eucgr.E00701 Eucalyptus grandis HOM05D000011 ORTHO05D000018 1.8e-23 112.8 82 70.7
Eucgr.E00711 Eucalyptus grandis HOM05D000011 ORTHO05D000018 1.8e-23 112.8 82 69.5
Eucgr.E00903 Eucalyptus grandis HOM05D000011 ORTHO05D000018 1.8e-23 112.8 82 73.2
Eucgr.E00960 Eucalyptus grandis HOM05D000011 ORTHO05D000018 1.8e-23 112.8 81 69.1
Eucgr.E00684 Eucalyptus grandis HOM05D000011 ORTHO05D000018 4.1e-23 111.7 82 72.0
Eucgr.E00743 Eucalyptus grandis HOM05D000011 ORTHO05D000018 5.3e-23 111.3 81 69.1
Eucgr.E00713 Eucalyptus grandis HOM05D000011 ORTHO05D000018 1.2e-22 110.2 81 66.7
Eucgr.E00759 Eucalyptus grandis HOM05D000011 ORTHO05D000018 2.0e-22 109.4 81 67.9
Eucgr.E00745 Eucalyptus grandis HOM05D000011 ORTHO05D000018 2.6e-22 109.0 81 67.9
Eucgr.E00908 Eucalyptus grandis HOM05D000011 ORTHO05D000018 2.6e-22 109.0 81 67.9
Eucgr.E00917 Eucalyptus grandis HOM05D000011 ORTHO05D000018 3.4e-22 108.6 81 67.9
Eucgr.E00899 Eucalyptus grandis HOM05D000011 ORTHO05D000018 4.5e-22 108.2 81 65.4
Eucgr.E00730 Eucalyptus grandis HOM05D000011 ORTHO05D000018 5.9e-22 107.8 89 61.8
Eucgr.E00907 Eucalyptus grandis HOM05D000011 ORTHO05D000018 5.9e-22 107.8 101 58.4
Eucgr.E00891 Eucalyptus grandis HOM05D000011 ORTHO05D000018 7.6e-22 107.5 103 55.3
Eucgr.E00693 Eucalyptus grandis HOM05D000011 ORTHO05D000018 1.3e-21 106.7 101 59.4
Eucgr.E00699 Eucalyptus grandis HOM05D000011 ORTHO05D000018 1.7e-21 106.3 82 67.1
Eucgr.E00715 Eucalyptus grandis HOM05D000011 ORTHO05D000018 3.8e-21 105.1 103 56.3
Eucgr.E00968 Eucalyptus grandis HOM05D000011 ORTHO05D000018 3.8e-21 105.1 102 56.9
Eucgr.E00928 Eucalyptus grandis HOM05D000011 ORTHO05D000018 3.2e-20 102.1 81 65.4
Eucgr.E00975 Eucalyptus grandis HOM05D000011 ORTHO05D000018 3.6e-19 98.6 82 65.9
Eucgr.E00963 Eucalyptus grandis HOM05D000011 ORTHO05D000018 1.0e-18 97.1 69 75.4
PGR042G0084 Punica granatum HOM05D000011 ORTHO05D000018 3.8e-13 78.6 82 48.8
TAR628G1037 Trochodendron aralioides HOM05D000011 ORTHO05D000018 1.1e-09 67.0 79 41.8
FAN06G2948 Fragaria x ananassa HOM05D000011 ORTHO05D000018 9.7e-09 63.9 93 38.7
FvH4_7g08870 Fragaria vesca HOM05D000011 ORTHO05D000018 2.8e-08 62.4 93 38.7
Prupe.1G047900 Prunus persica HOM05D000011 ORTHO05D000018 2.8e-08 62.4 91 39.6
Prupe.1G051500 Prunus persica HOM05D000011 ORTHO05D000018 3.7e-08 62.0 80 42.5
GSVIVG01032828001 Vitis vinifera HOM05D000011 ORTHO05D000018 3.7e-08 62.0 87 39.1
Prupe.1G217800 Prunus persica HOM05D000011 ORTHO05D000018 4.8e-08 61.6 88 37.5
Prupe.1G217900 Prunus persica HOM05D000011 ORTHO05D000018 4.8e-08 61.6 88 37.5
RcHm_v2.0_Chr1g0357971 Rosa chinensis HOM05D000011 ORTHO05D000018 6.3e-08 61.2 92 34.8
GSVIVG01024114001 Vitis vinifera HOM05D000011 ORTHO05D000018 6.3e-08 61.2 95 36.8
RcHm_v2.0_Chr1g0358121 Rosa chinensis HOM05D000011 ORTHO05D000018 8.2e-08 60.8 92 34.8
Prupe.1G048500 Prunus persica HOM05D000011 ORTHO05D000018 1.1e-07 60.5 79 40.5
Prupe.1G049900 Prunus persica HOM05D000011 ORTHO05D000018 1.1e-07 60.5 79 40.5
Prupe.1G043100 Prunus persica HOM05D000011 ORTHO05D000018 1.4e-07 60.1 78 44.9
RcHm_v2.0_Chr1g0357611 Rosa chinensis HOM05D000011 ORTHO05D000018 1.8e-07 59.7 92 34.8
Prupe.1G043700 Prunus persica HOM05D000011 ORTHO05D000018 2.4e-07 59.3 75 44.0
Prupe.1G051800 Prunus persica HOM05D000011 ORTHO05D000018 2.4e-07 59.3 81 40.7
Dinv27099 Davidia involucrata HOM05D000011 ORTHO05D000018 3.1e-07 58.9 78 35.9
FvH4_7g33440 Fragaria vesca HOM05D000011 ORTHO05D000018 3.1e-07 58.9 81 34.6
Prupe.1G046700 Prunus persica HOM05D000011 ORTHO05D000018 3.1e-07 58.9 80 40.0
FAN01G1881 Fragaria x ananassa HOM05D000011 ORTHO05D000018 4.1e-07 58.5 89 36.0
Prupe.1G052200 Prunus persica HOM05D000011 ORTHO05D000018 4.1e-07 58.5 90 38.9
Cc03_g06210 Coffea canephora HOM05D000011 ORTHO05D000018 5.3e-07 58.2 115 31.3
Cc06_g16200 Coffea canephora HOM05D000011 ORTHO05D000018 5.3e-07 58.2 95 33.7
COL.COLO4_26611 Corchorus olitorius HOM05D000011 ORTHO05D005387 5.3e-07 58.2 86 39.5
FAN06G3890 Fragaria x ananassa HOM05D000011 ORTHO05D000018 5.3e-07 58.2 92 31.5
Prupe.1G047700 Prunus persica HOM05D000011 ORTHO05D000018 5.3e-07 58.2 80 38.8
Prupe.1G048000 Prunus persica HOM05D000011 ORTHO05D000018 5.3e-07 58.2 80 38.8
QL11p046122 Quercus lobata HOM05D000011 ORTHO05D000018 5.3e-07 58.2 83 43.4
Cc03_g05850 Coffea canephora HOM05D000011 ORTHO05D000018 7.0e-07 57.8 85 37.6
TAR376G0423 Trochodendron aralioides HOM05D000011 ORTHO05D000018 9.1e-07 57.4 82 34.1
RcHm_v2.0_Chr1g0383521 Rosa chinensis HOM05D000011 ORTHO05D000018 1.2e-06 57.0 86 38.4
COL.COLO4_21661 Corchorus olitorius HOM05D000011 ORTHO05D000018 1.5e-06 56.6 86 38.4
FAN06G2605 Fragaria x ananassa HOM05D000011 ORTHO05D000018 1.5e-06 56.6 93 33.3
Cfa023504 Carpinus fangiana HOM05D000011 ORTHO05D000018 2.0e-06 56.2 79 38.0
COL.COLO4_17238 Corchorus olitorius HOM05D000011 ORTHO05D000018 2.0e-06 56.2 86 38.4
FvH4_7g15200 Fragaria vesca HOM05D000011 ORTHO05D000018 2.0e-06 56.2 82 34.1
MD07G1029000 Malus domestica HOM05D000011 ORTHO05D000018 2.0e-06 56.2 75 40.0
Manes.18G105800 Manihot esculenta HOM05D000011 ORTHO05D000018 2.0e-06 56.2 76 42.1
TAR376G0826 Trochodendron aralioides HOM05D000011 ORTHO05D000018 2.0e-06 56.2 82 32.9
CANSAT54G2000 Cannabis sativa HOM05D000011 ORTHO05D000018 2.6e-06 55.8 83 39.8
CiPaw.01G091500 Carya illinoinensis HOM05D000011 ORTHO05D000018 2.6e-06 55.8 81 37.0
Haze_14399 Corylus avellana HOM05D000011 ORTHO05D000018 2.6e-06 55.8 79 38.0
FAN01G0403 Fragaria x ananassa HOM05D000011 ORTHO05D000018 2.6e-06 55.8 89 34.8
MD07G1092600 Malus domestica HOM05D000011 ORTHO05D000018 2.6e-06 55.8 76 36.8
Potri.018G138500 Populus trichocarpa HOM05D000011 ORTHO05D000018 2.6e-06 55.8 75 44.0
TAR055G0005 Trochodendron aralioides HOM05D000011 ORTHO05D000018 2.6e-06 55.8 82 36.6
TAR376G1063 Trochodendron aralioides HOM05D000011 ORTHO05D000018 2.6e-06 55.8 82 34.1
Dinv29835 Davidia involucrata HOM05D000011 ORTHO05D000018 3.4e-06 55.5 84 42.9
Prupe.1G041300 Prunus persica HOM05D000011 ORTHO05D000018 3.4e-06 55.5 86 39.5
CiPaw.01G044500 Carya illinoinensis HOM05D000011 ORTHO05D000018 4.5e-06 55.1 76 40.8
Dinv27077 Davidia involucrata HOM05D000011 ORTHO05D000018 4.5e-06 55.1 95 33.7
Hma1.2p1_3410F.1_g335880 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 4.5e-06 55.1 104 27.9
Sabra18G0113600 Salix brachista HOM05D000011 ORTHO05D000018 4.5e-06 55.1 75 42.7
COL.COLO4_30795 Corchorus olitorius HOM05D000011 ORTHO05D000018 5.9e-06 54.7 109 32.1
MD17G1267900 Malus domestica HOM05D000002 ORTHO05D000001 5.9e-06 54.7 81 34.6
QL11p046103 Quercus lobata HOM05D000011 ORTHO05D000018 5.9e-06 54.7 75 38.7
GSVIVG01032824001 Vitis vinifera HOM05D000011 ORTHO05D000018 5.9e-06 54.7 83 39.8
FAN12G1277 Fragaria x ananassa HOM05D000011 ORTHO05D000018 7.7e-06 54.3 89 31.5
GSVIVG01032830001 Vitis vinifera HOM05D000011 ORTHO05D000018 7.7e-06 54.3 94 36.2


User provided reference genes

Program Settings