Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.9e-102 375.2 184 100.0
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.0e-94 350.1 182 93.4
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.3e-93 344.7 182 92.3
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-87 326.6 174 94.3
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.7e-87 325.5 174 94.3
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-85 320.1 174 92.0
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.2e-83 311.2 163 93.3
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.8e-83 310.8 226 73.9
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.2e-81 305.8 174 87.4
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.4e-72 275.8 139 96.4
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.3e-69 265.4 147 89.1
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.9e-67 257.3 188 72.3
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.4e-59 232.6 115 96.5
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 7.6e-42 174.5 164 55.5
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 1.1e-40 170.6 163 52.8
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 4.6e-39 165.2 167 53.9
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 1.9e-37 159.8 168 49.4
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 2.8e-36 156.0 162 51.2
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 6.9e-35 151.4 168 51.8
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 6.9e-35 151.4 164 48.2
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 4.5e-34 148.7 175 48.6
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 7.6e-34 147.9 169 46.2
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 1.3e-33 147.1 168 50.6
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 1.3e-33 147.1 174 49.4
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 5.0e-33 145.2 171 48.5
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 6.5e-33 144.8 175 49.1
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 6.5e-33 144.8 177 50.3
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 8.4e-33 144.4 166 50.0
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 8.4e-33 144.4 177 50.3
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 1.1e-32 144.1 169 47.9
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 1.4e-32 143.7 164 46.3
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 4.2e-32 142.1 162 48.8
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 5.5e-32 141.7 171 46.2
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 2.1e-31 139.8 167 48.5
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 2.7e-31 139.4 158 46.8
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 6.1e-31 138.3 158 46.8
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 1.0e-30 137.5 164 45.1
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 1.8e-30 136.7 171 46.2
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 3.9e-30 135.6 157 49.7
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 5.1e-30 135.2 172 44.2
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 8.7e-30 134.4 158 47.5
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.5e-29 133.7 171 45.6
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 1.9e-29 133.3 162 46.9
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 2.5e-29 132.9 158 48.1
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 2.5e-29 132.9 162 43.8
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 4.3e-29 132.1 164 45.1
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 7.4e-29 131.3 172 45.3
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 7.4e-29 131.3 159 47.2
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 1.3e-28 130.6 174 42.0
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 1.3e-28 130.6 161 46.6
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 2.8e-28 129.4 166 44.6
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 2.8e-28 129.4 169 44.4
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 3.7e-28 129.0 166 44.6
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 8.2e-28 127.9 158 48.1
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 2.4e-27 126.3 162 42.6
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 3.1e-27 125.9 167 43.1
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 6.9e-27 124.8 164 44.5
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 1.2e-26 124.0 152 47.4
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 1.2e-26 124.0 136 47.1
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 1.5e-26 123.6 160 47.5
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 1.5e-26 123.6 161 43.5
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 2.0e-26 123.2 159 45.9
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 2.0e-26 123.2 157 46.5
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 2.0e-26 123.2 162 43.8
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 2.6e-26 122.9 183 41.5
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 3.4e-26 122.5 156 44.9
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 4.5e-26 122.1 160 45.6
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 4.5e-26 122.1 165 39.4
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 5.9e-26 121.7 179 41.9
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 2.9e-25 119.4 143 50.3
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 1.9e-24 116.7 128 52.3
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 3.2e-24 115.9 167 40.7
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 4.2e-24 115.5 171 43.3
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 5.5e-24 115.2 73 69.9
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 1.8e-22 110.2 144 44.4
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 3.0e-22 109.4 168 41.7
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 5.1e-22 108.6 158 38.6
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 5.1e-22 108.6 166 41.0
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.8e-22 107.8 77 72.7
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 2.0e-21 106.7 146 45.9
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 4.3e-21 105.5 157 39.5
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 1.3e-20 104.0 146 44.5
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 1.7e-20 103.6 79 59.5
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 2.2e-20 103.2 146 45.2
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 2.2e-20 103.2 144 45.8
Eucgr.E00710 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.7e-20 102.4 76 68.4
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 1.1e-19 100.9 146 41.1
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 1.1e-19 100.9 76 57.9
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 1.4e-19 100.5 79 60.8
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 2.0e-18 96.7 82 58.5
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.7e-17 93.6 95 45.3
Eucgr.E00971 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.2e-17 93.2 69 72.5
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 3.8e-17 92.4 146 39.7
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 6.5e-17 91.7 65 63.1
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 6.5e-17 91.7 79 53.2
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 1.9e-16 90.1 137 38.0
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 5.5e-16 88.6 133 41.4
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 9.4e-16 87.8 127 44.1
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 1.6e-15 87.0 164 36.0
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 2.7e-15 86.3 138 39.9
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 3.6e-15 85.9 115 43.5
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 6.1e-15 85.1 81 53.1
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 1.8e-14 83.6 101 42.6
Eucgr.H03760 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.8e-14 81.3 60 71.7
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 3.3e-13 79.3 73 49.3
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 5.7e-13 78.6 122 39.3
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.8e-12 75.5 100 40.0
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 6.3e-12 75.1 137 37.2
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 8.2e-12 74.7 80 43.8
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.4e-11 73.2 109 39.4
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 7.7e-10 68.2 60 51.7
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 1.0e-09 67.8 83 42.2
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 1.3e-09 67.4 73 50.7
SHI06954 Sapria himalayana HOM05D000023 ORTHO05D000014 3.8e-09 65.9 108 40.7
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.0e-09 65.5 89 40.4
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 4.2e-08 62.4 67 49.3
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 5.5e-08 62.0 48 60.4
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 9.4e-08 61.2 94 34.0
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 4.7e-07 58.9 91 34.1


User provided reference genes

Program Settings