Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.4e-77 291.6 146 100.0
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.8e-70 269.2 139 96.4
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-68 263.1 139 93.5
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.4e-68 260.4 139 92.8
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.3e-67 256.9 142 90.8
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.0e-33 147.1 139 61.2
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 7.4e-32 141.0 146 53.4
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 2.9e-28 129.0 120 55.0
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 5.0e-28 128.3 145 46.9
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 1.9e-27 126.3 138 50.7
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 2.5e-27 125.9 140 47.1
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 4.2e-27 125.2 135 45.9
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.7e-26 122.5 61 95.1
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 3.6e-26 122.1 139 46.8
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 8.8e-25 117.5 125 48.8
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 1.5e-24 116.7 115 50.4
Eucgr.E00704 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.0e-24 116.3 76 78.9
Eucgr.E00945 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.0e-24 116.3 76 77.6
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 3.3e-24 115.5 116 52.6
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 3.3e-24 115.5 136 43.4
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.4e-24 115.2 139 42.4
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 1.7e-23 113.2 132 44.7
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 2.8e-23 112.5 120 49.2
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 3.7e-23 112.1 107 49.5
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 4.8e-23 111.7 109 49.5
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 4.8e-23 111.7 140 45.0
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 4.8e-23 111.7 102 51.0
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 8.2e-23 110.9 135 41.5
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 1.1e-22 110.5 139 41.7
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 1.8e-22 109.8 127 44.9
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 2.4e-22 109.4 131 44.3
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 2.4e-22 109.4 139 43.9
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 3.1e-22 109.0 138 41.3
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 4.1e-22 108.6 102 50.0
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 4.1e-22 108.6 108 48.1
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 4.1e-22 108.6 108 47.2
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 4.1e-22 108.6 108 47.2
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 5.3e-22 108.2 102 51.0
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 7.0e-22 107.8 121 45.5
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 1.2e-21 107.1 108 47.2
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 2.6e-21 105.9 102 50.0
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 5.9e-21 104.8 107 45.8
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 1.3e-20 103.6 98 48.0
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 1.7e-20 103.2 134 44.0
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 2.2e-20 102.8 100 50.0
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 2.2e-20 102.8 133 41.4
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 2.9e-20 102.4 152 39.5
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 3.8e-20 102.1 135 40.0
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 3.8e-20 102.1 100 50.0
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 3.8e-20 102.1 116 45.7
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 3.8e-20 102.1 146 40.4
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 5.0e-20 101.7 115 44.3
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 5.0e-20 101.7 133 42.9
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 6.5e-20 101.3 108 44.4
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 8.5e-20 100.9 133 39.8
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 1.4e-19 100.1 106 48.1
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 1.4e-19 100.1 120 43.3
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 2.5e-19 99.4 118 44.9
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 2.5e-19 99.4 112 44.6
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 2.5e-19 99.4 101 48.5
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 2.5e-19 99.4 112 45.5
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 4.2e-19 98.6 107 46.7
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 5.5e-19 98.2 117 45.3
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 7.2e-19 97.8 140 39.3
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 7.2e-19 97.8 103 48.5
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 1.2e-18 97.1 126 45.2
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 1.2e-18 97.1 115 45.2
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 1.6e-18 96.7 147 36.7
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 2.1e-18 96.3 94 47.9
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 2.1e-18 96.3 110 44.5
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 2.7e-18 95.9 97 51.5
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 8.0e-18 94.4 101 47.5
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 1.4e-17 93.6 86 51.2
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.4e-17 93.6 125 43.2
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 1.4e-17 93.6 109 49.5
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.3e-17 92.8 125 43.2
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.3e-17 92.8 125 43.2
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 5.2e-17 91.7 139 35.3
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 8.8e-17 90.9 115 47.0
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 1.1e-16 90.5 132 38.6
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 3.3e-16 89.0 142 38.0
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 4.4e-16 88.6 139 34.5
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 1.4e-14 83.6 147 36.1
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-13 80.5 84 46.4
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 2.2e-12 76.3 116 41.4
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.0e-12 75.1 83 44.6
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 7.2e-11 71.2 110 38.2
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 1.6e-10 70.1 115 33.0
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 4.7e-10 68.6 85 37.6
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 6.1e-10 68.2 111 33.3
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 6.7e-09 64.7 100 37.0
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 5.7e-08 61.6 127 33.9
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 9.7e-08 60.8 70 47.1
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 1.7e-07 60.1 69 46.4
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 8.2e-07 57.8 70 44.3
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 8.2e-07 57.8 69 43.5
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 8.2e-07 57.8 98 38.8
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.1e-06 57.4 74 43.2
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 1.4e-06 57.0 69 44.9
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 1.4e-06 57.0 69 44.9
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 1.4e-06 57.0 87 36.8
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 1.4e-06 57.0 88 40.9
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 1.8e-06 56.6 71 40.8
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 1.8e-06 56.6 87 37.9
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 4.1e-06 55.5 67 44.8


User provided reference genes

Program Settings