Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 1.6e-287 992.3 591 100.0
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 1.8e-140 503.8 581 55.8
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 3.0e-140 503.1 581 61.8
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 2.2e-138 496.9 601 48.6
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.8e-137 493.8 593 47.0
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 6.9e-137 491.9 589 51.1
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 3.2e-134 483.0 576 55.6
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 5.5e-134 482.3 590 60.7
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 1.2e-133 481.1 577 55.3
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 6.1e-133 478.8 604 51.0
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 3.0e-132 476.5 570 54.4
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 2.0e-131 473.8 578 54.8
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 3.3e-131 473.0 570 54.6
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 4.8e-130 469.2 612 46.1
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 2.4e-129 466.8 597 48.6
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 1.3e-127 461.1 581 58.5
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 2.2e-127 460.3 581 58.2
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 2.9e-127 459.9 592 51.9
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 2.5e-126 456.8 594 49.3
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 9.4e-126 454.9 622 51.8
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 1.6e-125 454.1 583 55.4
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 1.6e-125 454.1 578 56.1
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 4.4e-123 446.0 579 53.2
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 9.7e-123 444.9 570 51.6
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 2.4e-121 440.3 578 56.4
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 1.0e-119 434.9 587 43.4
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 1.0e-119 434.9 573 51.5
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 4.7e-117 426.0 585 51.1
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 3.0e-116 423.3 577 51.5
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 6.7e-116 422.2 600 48.0
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 6.3e-114 415.6 569 51.8
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 4.1e-113 412.9 579 52.5
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 2.2e-111 407.1 580 54.8
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 3.8e-111 406.4 604 53.1
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.1e-110 404.8 584 45.7
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 3.2e-110 403.3 573 48.3
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 3.2e-110 403.3 572 50.0
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 3.2e-110 403.3 588 48.5
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 5.5e-110 402.5 617 49.1
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 4.0e-108 396.4 552 55.1
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 8.8e-108 395.2 581 49.2
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 2.2e-106 390.6 536 48.1
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 8.3e-106 388.7 587 52.0
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 5.9e-104 382.5 588 44.9
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 2.9e-103 380.2 583 47.7
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 2.9e-103 380.2 587 51.3
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 5.0e-103 379.4 599 45.4
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 6.5e-103 379.0 593 47.4
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 2.7e-101 373.6 608 45.1
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 4.7e-101 372.9 580 43.1
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 1.4e-100 371.3 574 47.6
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 2.3e-100 370.5 584 51.0
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 2.6e-99 367.1 611 45.8
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 5.7e-99 365.9 388 67.8
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 3.1e-97 360.1 582 46.7
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 3.1e-97 360.1 585 50.1
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 5.4e-97 359.4 517 55.1
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 7.0e-97 359.0 572 52.1
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 1.2e-96 358.2 579 50.1
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 1.6e-96 357.8 514 48.8
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 2.5e-94 350.5 577 50.6
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 2.8e-93 347.1 330 67.6
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 3.6e-93 346.7 591 43.8
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 1.0e-92 345.1 519 49.1
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 1.0e-92 345.1 578 44.3
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 1.8e-92 344.4 585 46.5
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 1.8e-92 344.4 585 46.5
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 4.0e-92 343.2 604 42.5
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 5.2e-92 342.8 582 44.5
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 2.2e-90 337.4 585 46.2
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 2.9e-90 337.0 588 43.2
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 2.9e-90 337.0 588 43.2
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 3.7e-90 336.7 475 52.6
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 1.1e-89 335.1 598 44.6
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 7.0e-89 332.4 520 43.3
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 4.6e-88 329.7 492 50.4
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 4.3e-86 323.2 582 43.3
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 5.6e-86 322.8 592 36.5
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 5.6e-86 322.8 592 36.5
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 1.0e-84 318.5 497 53.7
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 1.0e-84 318.5 596 43.6
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 8.9e-84 315.5 583 44.4
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 4.4e-83 313.2 596 49.2
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 7.5e-83 312.4 574 48.8
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 1.7e-82 311.2 589 48.2
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 2.7e-80 303.9 582 42.3
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 7.3e-78 295.8 580 41.0
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 1.8e-76 291.2 517 41.4
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 9.8e-75 285.4 369 65.3
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 1.3e-74 285.0 585 44.6
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 4.9e-74 283.1 585 46.3
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 4.9e-74 283.1 581 45.8
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 3.2e-73 280.4 597 45.7
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 3.2e-73 280.4 587 45.1
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 3.5e-72 276.9 582 45.9
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 1.5e-70 271.6 523 34.4
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 2.6e-67 260.8 581 42.3
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 1.9e-62 244.6 586 43.0
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 1.5e-59 235.0 590 43.6
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 9.9e-59 232.3 473 42.9
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 9.6e-54 215.7 528 41.3
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 9.6e-54 215.7 539 39.0
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 6.2e-53 213.0 519 35.1
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.7e-50 204.9 316 49.1
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 2.6e-27 127.9 334 51.8
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 3.8e-26 124.0 206 37.9
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 4.3e-22 110.5 158 42.4
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 9.1e-20 102.8 119 52.1
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 7.9e-16 89.7 176 36.9
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 1.1e-12 79.3 196 32.7
Hma1.2p1_0082F.1_g042550 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 3.1e-12 77.8 60 68.3
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 1.0e-10 72.8 89 43.8
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.7e-10 72.0 204 31.4
Actinidia27580 Actinidia chinensis HOM05D006572 ORTHO05D008181 3.0e-07 61.2 117 41.0
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 8.8e-07 59.7 47 59.6
Cpa.g.sc79.39 Carica papaya HOM05D006572 ORTHO05D008181 1.1e-06 59.3 83 39.8
HanXRQChr09g0272151 Helianthus annuus HOM05D006572 ORTHO05D008181 2.6e-06 58.2 49 61.2
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 2.6e-06 58.2 47 57.4


User provided reference genes

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