Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 0.0e+00 1204.1 615 100.0
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 2.0e-126 457.2 617 48.6
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 1.4e-108 397.9 615 42.6
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 6.6e-106 389.0 618 42.7
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 3.3e-105 386.7 616 41.9
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 1.5e-102 377.9 618 41.7
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 1.1e-100 371.7 631 41.8
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 1.2e-99 368.2 621 40.3
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 2.7e-99 367.1 624 41.7
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 4.6e-99 366.3 633 41.1
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 7.3e-97 359.0 632 40.5
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 4.7e-96 356.3 616 41.4
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 1.2e-94 351.7 556 40.6
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 5.8e-94 349.4 604 41.6
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 9.9e-94 348.6 631 39.1
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 2.2e-93 347.4 480 45.6
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 6.4e-93 345.9 618 39.2
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 2.4e-92 344.0 621 40.9
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 2.1e-91 340.9 619 38.8
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 3.5e-91 340.1 617 39.1
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 6.6e-90 335.9 620 38.7
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 2.5e-89 334.0 619 39.3
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 4.3e-89 333.2 562 40.2
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 2.1e-88 330.9 620 40.0
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.2e-88 329.3 561 40.3
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 6.2e-88 329.3 620 38.1
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.4e-87 328.2 624 38.1
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 2.4e-87 327.4 621 38.6
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 6.8e-87 325.9 644 38.8
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 8.9e-87 325.5 498 42.2
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 2.0e-86 324.3 441 44.4
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 2.6e-86 323.9 621 38.3
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 9.9e-86 322.0 626 37.9
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.7e-85 321.2 498 41.8
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 2.9e-85 320.5 532 40.0
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 2.9e-85 320.5 498 41.8
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.4e-84 318.2 588 39.3
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.9e-84 317.8 637 38.5
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.0e-82 312.0 648 36.7
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 2.3e-82 310.8 550 38.7
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 2.3e-82 310.8 614 36.8
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 1.1e-81 308.5 630 38.1
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 3.3e-81 307.0 632 36.9
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 5.6e-81 306.2 631 38.2
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.2e-80 305.1 531 39.9
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 2.8e-80 303.9 615 36.6
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 1.8e-79 301.2 640 36.1
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 4.0e-79 300.1 613 35.7
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 2.6e-78 297.4 634 37.1
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.6e-78 297.4 620 37.4
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 7.6e-78 295.8 493 41.6
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.7e-77 294.7 627 36.8
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.2e-77 294.3 531 39.2
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 4.9e-77 293.1 625 36.3
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 6.4e-77 292.7 651 36.1
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 2.4e-76 290.8 544 38.1
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 3.2e-76 290.4 645 37.1
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 5.4e-76 289.7 494 40.9
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 7.1e-76 289.3 558 37.6
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 2.7e-75 287.3 576 36.8
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 1.7e-74 284.6 534 37.1
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.9e-73 281.2 540 37.4
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.8e-72 277.3 723 34.3
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 5.3e-71 273.1 508 40.0
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 9.0e-71 272.3 386 43.3
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 2.6e-70 270.8 492 38.4
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 4.5e-70 270.0 634 36.1
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 2.7e-67 260.8 482 35.1
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 1.0e-66 258.8 540 34.8
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.3e-66 257.7 614 34.5
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 3.3e-65 253.8 586 34.8
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 3.3e-65 253.8 617 35.7
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 9.6e-65 252.3 580 36.4
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 9.6e-65 252.3 572 33.6
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 1.6e-64 251.5 632 34.3
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 1.8e-63 248.1 561 36.4
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 5.3e-63 246.5 589 35.7
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 5.3e-63 246.5 624 33.8
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 9.0e-63 245.7 384 39.6
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 1.2e-62 245.4 619 33.8
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.2e-62 245.4 390 41.3
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 4.5e-62 243.4 585 35.7
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 5.8e-62 243.0 434 39.2
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 3.2e-60 237.3 435 38.2
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 4.2e-60 236.9 684 33.0
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 7.1e-60 236.1 586 34.8
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 1.2e-59 235.3 585 35.6
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 7.9e-59 232.6 585 35.4
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 2.3e-58 231.1 625 36.2
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 5.1e-58 229.9 626 33.4
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 8.7e-58 229.2 605 34.0
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 1.1e-57 228.8 576 35.9
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 1.5e-57 228.4 567 36.3
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 4.3e-57 226.9 586 33.4
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 6.9e-55 219.5 525 33.3
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 1.7e-53 214.9 508 34.6
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 2.9e-53 214.2 547 33.6
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 8.4e-53 212.6 488 32.6
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 1.9e-52 211.5 441 35.1
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 1.9e-52 211.5 620 33.2
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 2.5e-52 211.1 522 34.9
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 3.5e-51 207.2 604 32.8
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 1.3e-50 205.3 608 30.9
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 1.1e-49 202.2 620 30.6
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 1.6e-48 198.4 629 31.8
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 6.9e-47 193.0 498 33.1
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 2.6e-46 191.0 628 32.3
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 5.0e-45 186.8 668 31.4
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 5.5e-44 183.3 285 39.3
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 7.2e-44 183.0 309 38.2
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 3.6e-43 180.6 529 33.8
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 8.5e-37 159.5 451 31.0
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 1.7e-32 145.2 380 31.6
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 4.2e-28 130.6 459 27.7
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 2.7e-27 127.9 277 34.3
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 2.7e-19 101.3 402 28.9
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 4.5e-14 84.0 271 25.1
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 2.9e-13 81.3 170 32.9
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 6.1e-11 73.6 80 50.0
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 5.2e-10 70.5 162 37.0
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 3.4e-09 67.8 157 32.5
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 5.4e-07 60.5 114 35.1
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 2.7e-06 58.2 153 30.1


User provided reference genes

Program Settings