Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00669 Eucalyptus grandis HOM05D000607 ORTHO05D000518 2.5e-42 174.9 80 100.0
Eucgr.E00667 Eucalyptus grandis HOM05D000607 ORTHO05D000518 6.7e-27 123.6 90 70.0
Eucgr.E00661 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.5e-26 122.5 90 70.0
Eucgr.E00668 Eucalyptus grandis HOM05D000607 ORTHO05D000518 2.2e-25 118.6 91 67.0
Eucgr.E00662 Eucalyptus grandis HOM05D000607 ORTHO05D000518 2.8e-25 118.2 80 72.5
Eucgr.E00769 Eucalyptus grandis HOM05D000607 ORTHO05D000518 8.2e-25 116.7 91 64.8
Eucgr.E00767 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.1e-24 116.3 91 65.9
Eucgr.E00768 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.1e-24 116.3 91 65.9
Eucgr.E00771 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.4e-24 115.9 90 65.6
Eucgr.E00663 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.8e-24 115.5 91 64.8
Eucgr.E00660 Eucalyptus grandis HOM05D000607 ORTHO05D000518 5.3e-24 114.0 95 62.1
Eucgr.E00664 Eucalyptus grandis HOM05D000607 ORTHO05D000518 2.0e-23 112.1 91 64.8
Eucgr.E00666 Eucalyptus grandis HOM05D000607 ORTHO05D000518 2.2e-22 108.6 90 63.3
Eucgr.E00670 Eucalyptus grandis HOM05D000607 ORTHO05D000518 6.5e-22 107.1 90 62.2
Eucgr.E00772 Eucalyptus grandis HOM05D000607 ORTHO05D000518 6.5e-22 107.1 90 62.2
Eucgr.E00665 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.9e-21 105.5 90 61.1
Eucgr.E00657 Eucalyptus grandis HOM05D000607 ORTHO05D000518 4.2e-21 104.4 90 61.1
Eucgr.E00766 Eucalyptus grandis HOM05D000607 ORTHO05D000518 4.2e-21 104.4 84 64.3
Eucgr.E00775 Eucalyptus grandis HOM05D000607 ORTHO05D000518 5.5e-21 104.0 90 61.1
Eucgr.E00658 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.2e-20 102.8 90 61.1
Eucgr.L02001 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.2e-20 102.8 90 60.0
Eucgr.E00659 Eucalyptus grandis HOM05D000607 ORTHO05D000518 3.6e-20 101.3 91 59.3
Eucgr.L02000 Eucalyptus grandis HOM05D000607 ORTHO05D000518 3.6e-20 101.3 91 59.3
Eucgr.E00673 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.8e-19 99.0 90 60.0
Eucgr.E00765 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.2e-15 86.3 81 56.8
Eucgr.E00779 Eucalyptus grandis HOM05D000607 ORTHO05D000518 2.2e-14 82.0 87 50.6
Eucgr.E00671 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.2e-12 76.3 90 48.9
Eucgr.E00672 Eucalyptus grandis HOM05D000607 ORTHO05D000518 2.1e-12 75.5 77 57.1
Prupe.5G106100 Prunus persica HOM05D000607 ORTHO05D000518 4.0e-11 71.2 95 46.3
Duzib205G1151 Durio zibethinus HOM05D000607 ORTHO05D000518 1.5e-10 69.3 103 43.7
MBI04_g35361_MAGBIO Magnolia biondii HOM05D000607 ORTHO05D000518 1.5e-10 69.3 106 42.5
Thecc.03G286000 Theobroma cacao HOM05D000607 ORTHO05D000518 1.3e-09 66.2 96 43.8
Eucgr.E00770 Eucalyptus grandis HOM05D000607 ORTHO05D000518 1.7e-09 65.9 31 96.8
Duzib068G0001 Durio zibethinus HOM05D000607 ORTHO05D000518 2.2e-09 65.5 92 46.7
TAR629G3368 Trochodendron aralioides HOM05D000607 ORTHO05D000518 2.2e-09 65.5 95 43.2
Glyma.08G017900 Glycine max HOM05D000607 ORTHO05D000518 2.8e-09 65.1 90 44.4
CDE04G0521 Ceratophyllum demersum HOM05D000607 ORTHO05D000518 3.7e-09 64.7 102 42.2
TAR629G3317 Trochodendron aralioides HOM05D000607 ORTHO05D000518 4.8e-09 64.3 95 43.2
Aqoxy5G04072 Aquilegia oxysepala HOM05D000607 ORTHO05D000518 8.2e-09 63.5 111 39.6
MD01G1209100 Malus domestica HOM05D000607 ORTHO05D000518 8.2e-09 63.5 94 45.7
MD07G1279400 Malus domestica HOM05D000607 ORTHO05D000518 1.1e-08 63.2 99 39.4
Manes.02G017600 Manihot esculenta HOM05D000607 ORTHO05D000518 1.1e-08 63.2 95 42.1
Medtr8g098915 Medicago truncatula HOM05D000607 ORTHO05D000518 1.1e-08 63.2 95 41.1
Dinv35259 Davidia involucrata HOM05D000607 ORTHO05D000518 1.4e-08 62.8 106 39.6
Gohir.D09G185900 Gossypium hirsutum HOM05D000607 ORTHO05D000518 2.4e-08 62.0 110 37.3
Nn1g01666 Nelumbo nucifera HOM05D000607 ORTHO05D000518 2.4e-08 62.0 115 38.3
Gorai.006G208600 Gossypium raimondii HOM05D000607 ORTHO05D000518 3.1e-08 61.6 111 36.9
MD01G1209200 Malus domestica HOM05D000607 ORTHO05D000518 3.1e-08 61.6 94 44.7
CDE12G0890 Ceratophyllum demersum HOM05D000607 ORTHO05D000518 4.1e-08 61.2 102 42.2
Phvul.002G292900 Phaseolus vulgaris HOM05D000607 ORTHO05D000518 5.3e-08 60.8 112 37.5
Prupe.2G301600 Prunus persica HOM05D000607 ORTHO05D000518 5.3e-08 60.8 97 39.2
Ciclev10006198m.g Citrus clementina HOM05D000607 ORTHO05D000518 7.0e-08 60.5 107 40.2
Dinv37600 Davidia involucrata HOM05D000607 ORTHO05D000518 9.1e-08 60.1 102 39.2
Lj4g0006505 Lotus japonicus HOM05D000607 ORTHO05D000518 1.2e-07 59.7 114 36.8
MD14G1111400 Malus domestica HOM05D000607 ORTHO05D000518 1.2e-07 59.7 101 41.6
Psat7g030320 Pisum sativum HOM05D000607 ORTHO05D000518 1.2e-07 59.7 101 41.6
Dinv38901 Davidia involucrata HOM05D000607 ORTHO05D000518 1.6e-07 59.3 91 40.7
Gohir.A09G191400 Gossypium hirsutum HOM05D000607 ORTHO05D000518 1.6e-07 59.3 112 36.6
Manes.14G021900 Manihot esculenta HOM05D000607 ORTHO05D000518 1.6e-07 59.3 108 38.9
MBI11_g29824_MAGBIO Magnolia biondii HOM05D000607 ORTHO05D000518 2.0e-07 58.9 127 34.6
Medtr6g051690 Medicago truncatula HOM05D000607 ORTHO05D000518 2.0e-07 58.9 95 41.1
MD06G1090200 Malus domestica HOM05D000607 ORTHO05D000518 2.7e-07 58.5 102 41.2
Manes.06G153100 Manihot esculenta HOM05D000607 ORTHO05D000518 2.7e-07 58.5 109 39.4
TPR.G12746 Trifolium pratense HOM05D000607 ORTHO05D000518 2.7e-07 58.5 107 38.3
GSVIVG01019413001 Vitis vinifera HOM05D000607 ORTHO05D000518 2.7e-07 58.5 102 38.2
Nn6g35654 Nelumbo nucifera HOM05D000607 ORTHO05D000518 3.5e-07 58.2 108 38.9
GSVIVG01028846001 Vitis vinifera HOM05D000607 ORTHO05D000518 3.5e-07 58.2 97 42.3
CiPaw.06G003700 Carya illinoinensis HOM05D000607 ORTHO05D000518 4.5e-07 57.8 91 46.2
Gohir.A03G021100 Gossypium hirsutum HOM05D000607 ORTHO05D000518 4.5e-07 57.8 97 36.1
PGR031G0601 Punica granatum HOM05D000607 ORTHO05D000518 4.5e-07 57.8 97 40.2
TAR375G0562 Trochodendron aralioides HOM05D000607 ORTHO05D000518 4.5e-07 57.8 95 38.9
Actinidia08584 Actinidia chinensis HOM05D000607 ORTHO05D000518 5.9e-07 57.4 103 41.7
arahy.Tifrunner.gnm1.ann1.R1DXQN Arachis hypogaea HOM05D000607 ORTHO05D000518 5.9e-07 57.4 106 36.8
Gorai.004G138000 Gossypium raimondii HOM05D000607 ORTHO05D000518 5.9e-07 57.4 99 39.4
arahy.Tifrunner.gnm1.ann1.T95N5A Arachis hypogaea HOM05D000607 ORTHO05D000518 7.7e-07 57.0 106 36.8
Glyma.05G211600 Glycine max HOM05D000607 ORTHO05D000518 7.7e-07 57.0 110 36.4
TPR.G33527 Trifolium pratense HOM05D000607 ORTHO05D000518 1.0e-06 56.6 97 38.1
Actinidia28349 Actinidia chinensis HOM05D000607 ORTHO05D000518 1.3e-06 56.2 99 39.4
Actinidia34160 Actinidia chinensis HOM05D000607 ORTHO05D000518 1.3e-06 56.2 117 36.8
CiPaw.05G261800 Carya illinoinensis HOM05D000607 ORTHO05D000518 1.3e-06 56.2 102 40.2
Gohir.D08G134800 Gossypium hirsutum HOM05D000607 ORTHO05D000518 1.3e-06 56.2 99 36.4
RcHm_v2.0_Chr7g0196641 Rosa chinensis HOM05D000607 ORTHO05D000518 1.3e-06 56.2 96 40.6
Actinidia10605 Actinidia chinensis HOM05D000607 ORTHO05D000518 1.7e-06 55.8 105 40.0
FAN10G0237 Fragaria x ananassa HOM05D000607 ORTHO05D000518 1.7e-06 55.8 91 41.8
FAN10G3187 Fragaria x ananassa HOM05D000607 ORTHO05D000518 1.7e-06 55.8 91 41.8
MD01G1209000 Malus domestica HOM05D000607 ORTHO05D000518 1.7e-06 55.8 94 39.4
Nn6g32425 Nelumbo nucifera HOM05D000607 ORTHO05D000518 1.7e-06 55.8 99 37.4
PSO478G1901 Papaver somniferum HOM05D000607 ORTHO05D000518 1.7e-06 55.8 101 39.6
FvH4_7g30310 Fragaria vesca HOM05D000607 ORTHO05D000518 2.2e-06 55.5 99 40.4
FAN01G1630 Fragaria x ananassa HOM05D000607 ORTHO05D000518 2.2e-06 55.5 99 40.4
FAN03G2538 Fragaria x ananassa HOM05D000607 ORTHO05D000518 2.2e-06 55.5 96 40.6
FAN06G1595 Fragaria x ananassa HOM05D000607 ORTHO05D000518 2.2e-06 55.5 99 40.4
FAN06G4931 Fragaria x ananassa HOM05D000607 ORTHO05D000518 2.2e-06 55.5 99 40.4
Cc08_g15210 Coffea canephora HOM05D000607 ORTHO05D000518 2.9e-06 55.1 102 37.3
Gohir.A08G114600 Gossypium hirsutum HOM05D000607 ORTHO05D000518 2.9e-06 55.1 99 36.4
Gohir.D03G147700 Gossypium hirsutum HOM05D000607 ORTHO05D000518 3.8e-06 54.7 97 34.0
RcHm_v2.0_Chr1g0378461 Rosa chinensis HOM05D000607 ORTHO05D000518 3.8e-06 54.7 98 38.8
GSVIVG01028844001 Vitis vinifera HOM05D000607 ORTHO05D000518 3.8e-06 54.7 98 38.8
PSO478G2661 Papaver somniferum HOM05D000607 ORTHO05D000518 5.0e-06 54.3 94 38.3
PSO478G4469 Papaver somniferum HOM05D000607 ORTHO05D000518 5.0e-06 54.3 94 38.3
Hund11438 Selenicereus undatus HOM05D000607 ORTHO05D000518 5.0e-06 54.3 106 36.8
TWI15G1017 Tripterygium wilfordii HOM05D000607 ORTHO05D000518 5.0e-06 54.3 108 39.8
Gorai.003G155200 Gossypium raimondii HOM05D000607 ORTHO05D000518 6.5e-06 53.9 97 34.0
Lj2g0000091 Lotus japonicus HOM05D000607 ORTHO05D000518 6.5e-06 53.9 101 34.7
ATR0620G004 Amborella trichopoda HOM05D000607 ORTHO05D000518 8.5e-06 53.5 99 37.4
FAN03G2793 Fragaria x ananassa HOM05D000607 ORTHO05D000518 8.5e-06 53.5 96 39.6
Peaxi162Scf00102g00166 Petunia axillaris HOM05D000607 ORTHO05D000518 8.5e-06 53.5 103 37.9
TWI39G0972 Tripterygium wilfordii HOM05D000607 ORTHO05D000518 8.5e-06 53.5 93 39.8


User provided reference genes

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