Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00553 Eucalyptus grandis HOM05D008129 ORTHO05D010232 5.7e-100 367.9 224 100.0
Haze_08930 Corylus avellana HOM05D008129 ORTHO05D010232 1.3e-30 137.5 154 46.1
Cfa012120 Carpinus fangiana HOM05D008129 ORTHO05D010232 4.8e-30 135.6 154 46.1
CiPaw.11G139400 Carya illinoinensis HOM05D008129 ORTHO05D010232 5.8e-28 128.6 167 43.1
Prupe.5G093100 Prunus persica HOM05D008129 ORTHO05D010232 5.8e-28 128.6 134 49.3
MD00G1110200 Malus domestica HOM05D008129 ORTHO05D010232 4.9e-27 125.6 153 42.5
FAN04G1130 Fragaria x ananassa HOM05D008129 ORTHO05D010232 1.1e-26 124.4 170 42.9
MD04G1064800 Malus domestica HOM05D008129 ORTHO05D010232 4.2e-26 122.5 146 40.4
RcHm_v2.0_Chr7g0198961 Rosa chinensis HOM05D008129 ORTHO05D010232 5.5e-26 122.1 145 46.9
FAN13G1875 Fragaria x ananassa HOM05D008129 ORTHO05D010232 1.2e-25 120.9 170 42.4
Hma1.2p1_0514F.1_g169980 Hydrangea macrophylla HOM05D008129 ORTHO05D010232 2.1e-25 120.2 168 42.3
Manes.01G065300 Manihot esculenta HOM05D008129 ORTHO05D010232 2.7e-25 119.8 141 43.3
Thecc.03G273100 Theobroma cacao HOM05D008129 ORTHO05D010232 2.7e-25 119.8 139 41.0
FAN08G0538 Fragaria x ananassa HOM05D008129 ORTHO05D010232 3.5e-25 119.4 145 46.2
FvH4_5g01760 Fragaria vesca HOM05D008129 ORTHO05D010232 4.6e-25 119.0 145 46.2
FAN18G4443 Fragaria x ananassa HOM05D008129 ORTHO05D010232 4.6e-25 119.0 145 46.2
Gohir.D03G153100 Gossypium hirsutum HOM05D008129 ORTHO05D010232 7.9e-25 118.2 150 40.0
Potri.001G108300 Populus trichocarpa HOM05D008129 ORTHO05D010232 1.3e-24 117.5 143 44.1
TAR629G0329 Trochodendron aralioides HOM05D008129 ORTHO05D010232 1.8e-24 117.1 157 40.8
Gorai.003G160700 Gossypium raimondii HOM05D008129 ORTHO05D010232 2.3e-24 116.7 150 39.3
Ciclev10022388m.g Citrus clementina HOM05D008129 ORTHO05D010232 3.9e-24 115.9 140 42.9
Sabra01G0081800 Salix brachista HOM05D008129 ORTHO05D010232 3.9e-24 115.9 139 42.4
Gohir.A03G018500 Gossypium hirsutum HOM05D008129 ORTHO05D010232 6.7e-24 115.2 150 38.7
CSS0045994 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 8.7e-24 114.8 154 39.6
COL.COLO4_05253 Corchorus olitorius HOM05D008129 ORTHO05D010232 1.5e-23 114.0 148 41.2
CiPaw.12G097000 Carya illinoinensis HOM05D008129 ORTHO05D010232 2.5e-23 113.2 147 38.8
Dinv38993 Davidia involucrata HOM05D008129 ORTHO05D010232 2.5e-23 113.2 157 42.0
QL12p017600 Quercus lobata HOM05D008129 ORTHO05D010232 1.3e-22 110.9 160 39.4
QL12p017610 Quercus lobata HOM05D008129 ORTHO05D010232 2.8e-22 109.8 161 41.0
CSS0008314 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 4.8e-22 109.0 172 40.1
SGA_v2.0_scaffold144G35967 Striga asiatica HOM05D008129 ORTHO05D010232 4.8e-22 109.0 140 42.9
Oeu029783.1 Olea europaea HOM05D008129 ORTHO05D010232 6.3e-22 108.6 144 41.0
Migut.E01284 Erythranthe guttata HOM05D008129 ORTHO05D010232 1.8e-21 107.1 151 39.1
Rhsim07G0093300 Rhododendron simsii HOM05D008129 ORTHO05D010232 1.8e-21 107.1 152 44.7
Lj2P194T38 Lonicera japonica HOM05D008129 ORTHO05D010232 9.0e-21 104.8 171 39.8
Thecc.03G273000 Theobroma cacao HOM05D008129 ORTHO05D010232 2.2e-19 100.1 142 39.4
Solyc08g080530.1 Solanum lycopersicum HOM05D008129 ORTHO05D010232 3.8e-19 99.4 150 34.0
PGSC0003DMG400003052 Solanum tuberosum HOM05D008129 ORTHO05D010232 3.8e-19 99.4 149 34.2
AUR62010633 Chenopodium quinoa HOM05D008129 ORTHO05D010232 5.0e-19 99.0 173 32.4
COL.COLO4_05254 Corchorus olitorius HOM05D008129 ORTHO05D010232 3.2e-18 96.3 145 38.6
Lalb_Chr09g0333221 Lupinus albus HOM05D008129 ORTHO05D010232 1.2e-17 94.4 134 39.6
Nn6g34205 Nelumbo nucifera HOM05D008129 ORTHO05D010232 1.2e-17 94.4 170 35.9
Glyma.11G025800 Glycine max HOM05D008129 ORTHO05D010232 1.6e-17 94.0 135 38.5
CsaV3_5G003170 Cucumis sativus L. HOM05D008129 ORTHO05D010232 2.7e-17 93.2 140 41.4
ECA246G2221 Erigeron canadensis HOM05D008129 ORTHO05D010232 4.6e-17 92.4 150 35.3
Cc08_g14170 Coffea canephora HOM05D008129 ORTHO05D010232 1.8e-16 90.5 173 34.7
Gohir.D03G153200 Gossypium hirsutum HOM05D008129 ORTHO05D010232 3.0e-16 89.7 134 38.1
TPR.G12796 Trifolium pratense HOM05D000268 ORTHO05D000261 3.9e-16 89.4 139 36.7
Nitab4.5_0003924g0090 Nicotiana tabacum HOM05D008129 ORTHO05D010232 5.1e-16 89.0 143 31.5
Gorai.003G160800 Gossypium raimondii HOM05D008129 ORTHO05D010232 6.7e-16 88.6 134 38.1
MELO3C005638.2 Cucumis melo HOM05D008129 ORTHO05D010232 8.7e-16 88.2 145 40.7
VMungo1215G1765 Vigna mungo HOM05D008129 ORTHO05D010232 3.3e-15 86.3 140 37.1
TAR375G1113 Trochodendron aralioides HOM05D008129 ORTHO05D010232 4.3e-15 85.9 122 34.4
Gohir.A03G018400 Gossypium hirsutum HOM05D008129 ORTHO05D010232 7.4e-15 85.1 134 37.3
Phvul.002G155100 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 7.4e-15 85.1 135 37.0
ClCG01G003050 Citrullus lanatus HOM05D008129 ORTHO05D010232 9.7e-15 84.7 149 40.3
Medtr8g096860 Medicago truncatula HOM05D008129 ORTHO05D010232 1.3e-14 84.3 140 34.3
SGA_v2.0_scaffold385G50459 Striga asiatica HOM05D008129 ORTHO05D010232 1.3e-14 84.3 117 37.6
Psat7g036080 Pisum sativum HOM05D008129 ORTHO05D010232 1.6e-14 84.0 141 35.5
Eucgr.D01909 Eucalyptus grandis HOM05D008129 ORTHO05D010232 4.8e-14 82.4 93 40.9
Lj2g0000650 Lotus japonicus HOM05D008129 ORTHO05D010232 3.1e-13 79.7 139 39.6
EL10Ac5g12748 Beta vulgaris HOM05D008129 ORTHO05D010232 9.0e-13 78.2 166 30.7
Phvul.002G286400 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 5.5e-10 68.9 145 35.2
vmacro00355 Vaccinium macrocarpon HOM05D001075 ORTHO05D001779 7.2e-10 68.6 81 44.4
Dinv37674 Davidia involucrata HOM05D008129 ORTHO05D010232 7.9e-09 65.1 51 54.9
Oeu062744.1 Olea europaea HOM05D008129 ORTHO05D010232 1.7e-06 57.4 50 50.0


User provided reference genes

Program Settings