Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 0.0e+00 1144.4 605 100.0
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 1.2e-181 640.6 579 59.4
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 8.0e-181 637.9 580 57.4
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 1.5e-179 633.6 580 57.6
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 3.1e-177 625.9 560 57.9
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 7.0e-177 624.8 565 58.4
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 8.9e-172 607.8 561 56.0
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 9.8e-171 604.4 564 55.9
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.9e-170 602.8 564 55.7
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 4.9e-170 602.1 583 54.7
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 4.9e-170 602.1 583 54.7
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 1.1e-169 600.9 563 55.8
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 4.1e-169 599.0 579 54.2
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 9.2e-169 597.8 560 55.2
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 7.8e-168 594.7 564 56.7
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 5.6e-166 588.6 564 56.0
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 9.5e-166 587.8 564 56.0
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 4.7e-165 585.5 563 54.7
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 4.7e-165 585.5 562 56.0
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 4.7e-165 585.5 561 53.7
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 6.2e-165 585.1 564 55.0
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 8.9e-164 581.3 560 55.0
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 1.5e-163 580.5 561 54.5
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 2.6e-163 579.7 561 56.5
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 2.6e-163 579.7 564 54.6
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 7.5e-163 578.2 580 53.4
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 1.7e-162 577.0 561 54.0
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 2.7e-160 569.7 560 53.9
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 3.5e-160 569.3 581 54.4
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.0e-159 567.8 563 55.2
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 3.3e-158 562.8 583 52.7
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 4.3e-158 562.4 559 54.2
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 2.1e-157 560.1 580 53.1
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 2.8e-157 559.7 563 52.8
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 6.8e-156 555.1 578 50.9
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 3.4e-155 552.7 566 50.9
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 4.4e-155 552.4 560 52.9
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 7.5e-155 551.6 560 53.0
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 7.5e-155 551.6 579 50.6
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 9.8e-155 551.2 579 50.6
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 2.2e-154 550.1 563 52.9
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 4.9e-154 548.9 578 51.2
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 6.4e-154 548.5 563 52.9
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.2e-152 544.3 565 51.9
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 1.6e-152 543.9 579 50.3
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 2.7e-152 543.1 579 50.1
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 6.0e-152 542.0 565 51.7
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 8.6e-151 538.1 579 49.4
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 1.1e-150 537.7 566 50.9
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 9.5e-150 534.6 581 50.3
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 8.9e-148 528.1 583 50.6
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 2.0e-147 526.9 566 49.3
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 2.9e-146 523.1 561 50.3
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 1.1e-145 521.2 581 51.1
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 3.2e-145 519.6 563 48.7
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 3.2e-145 519.6 568 48.6
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 4.1e-145 519.2 565 49.4
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 9.2e-145 518.1 584 49.5
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.6e-144 517.3 493 55.8
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 6.0e-144 515.4 563 48.3
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 1.7e-143 513.8 562 51.6
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 1.5e-142 510.8 564 47.3
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 5.6e-142 508.8 566 48.8
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 2.1e-141 506.9 578 49.3
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 4.7e-141 505.8 566 47.7
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 1.1e-140 504.6 565 49.4
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 5.2e-140 502.3 565 48.1
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 4.4e-139 499.2 562 49.6
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.3e-138 497.7 580 48.4
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 4.9e-138 495.7 564 49.3
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 1.4e-137 494.2 566 48.6
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 4.2e-137 492.7 522 51.0
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.0e-135 486.5 501 52.5
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 3.9e-135 486.1 567 46.4
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 6.6e-135 485.3 567 48.1
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 2.8e-133 479.9 565 48.0
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 2.8e-133 479.9 562 47.9
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 6.2e-133 478.8 489 51.7
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 1.8e-132 477.2 562 47.7
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 9.0e-132 474.9 565 47.4
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 9.0e-132 474.9 528 48.3
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 2.6e-131 473.4 572 46.0
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 1.1e-129 468.0 565 46.0
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 1.1e-129 468.0 582 44.5
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 5.1e-127 459.1 580 43.8
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 1.9e-126 457.2 492 48.2
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 1.9e-126 457.2 565 46.0
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 3.1e-124 449.9 565 46.7
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 4.9e-122 442.6 563 46.2
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.2e-120 438.0 562 45.7
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 3.4e-115 419.9 585 42.2
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 1.0e-111 408.3 568 43.0
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 2.2e-109 400.6 560 42.5
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 6.3e-109 399.1 570 42.1
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 6.9e-108 395.6 575 39.0
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 6.9e-108 395.6 568 40.7
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 5.1e-95 352.8 534 43.3
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 1.7e-93 347.8 569 37.8
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 4.5e-91 339.7 497 45.5
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 1.0e-82 312.0 371 45.3
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 7.5e-54 216.1 359 36.5
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 8.3e-53 212.6 526 30.6
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.3e-50 205.3 482 33.6
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 1.2e-48 198.7 162 60.5
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.8e-47 194.9 557 30.2
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 6.0e-35 153.3 643 24.4
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 1.7e-34 151.8 563 25.4
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.8e-23 115.2 600 24.5
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.4e-20 105.5 94 56.4
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 7.1e-20 103.2 216 37.5
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 8.1e-16 89.7 271 28.0
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 6.2e-08 63.5 58 55.2
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 8.1e-08 63.2 56 58.9


User provided reference genes

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