Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 2.7e-115 418.7 216 100.0
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 5.0e-77 291.6 223 67.7
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 6.6e-77 291.2 203 73.4
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 6.6e-77 291.2 203 73.4
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 8.6e-77 290.8 223 67.7
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 1.1e-76 290.4 200 72.5
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 9.5e-76 287.3 202 69.3
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 1.2e-75 287.0 223 68.2
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 1.2e-75 287.0 197 73.6
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.6e-75 286.6 209 69.4
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 2.8e-75 285.8 223 67.3
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 1.0e-74 283.9 214 66.8
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 1.4e-74 283.5 223 67.7
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 3.0e-74 282.3 221 66.1
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 3.0e-74 282.3 224 66.1
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 6.8e-74 281.2 197 73.1
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 1.2e-73 280.4 187 74.3
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 3.4e-73 278.9 222 66.2
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 1.3e-72 276.9 200 69.5
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 2.2e-72 276.2 223 67.3
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 8.3e-72 274.2 187 71.1
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 1.1e-71 273.9 190 71.6
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.1e-71 273.9 187 73.3
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 1.1e-71 273.9 193 70.5
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.2e-71 272.3 219 63.0
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.2e-70 270.4 190 71.6
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 3.5e-70 268.9 216 65.7
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 3.5e-70 268.9 187 71.1
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 3.5e-70 268.9 205 64.9
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 4.6e-70 268.5 206 68.0
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 7.8e-70 267.7 222 63.5
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 7.8e-70 267.7 189 73.0
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 1.0e-69 267.3 189 73.0
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 1.3e-69 266.9 210 69.0
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 3.0e-69 265.8 210 68.1
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 6.6e-69 264.6 217 62.2
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 6.6e-69 264.6 203 65.0
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 1.5e-68 263.5 216 63.0
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 1.5e-68 263.5 219 63.9
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 2.5e-68 262.7 205 63.4
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 3.3e-68 262.3 187 69.0
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 3.3e-68 262.3 200 66.0
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 4.3e-68 261.9 210 62.4
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 5.6e-68 261.5 190 70.5
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 7.3e-68 261.2 208 63.0
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 1.2e-67 260.4 193 68.9
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 1.6e-67 260.0 206 65.5
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 1.0e-66 257.3 201 66.7
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 1.4e-66 256.9 212 64.6
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 1.8e-66 256.5 188 66.5
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 8.9e-66 254.2 219 60.7
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.2e-65 253.8 208 59.6
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.2e-65 253.8 208 59.6
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.5e-65 253.4 208 59.6
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 1.5e-65 253.4 222 60.4
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 2.0e-65 253.1 186 66.1
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 2.6e-65 252.7 188 68.6
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 2.6e-65 252.7 209 64.1
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 3.4e-65 252.3 208 60.1
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 2.2e-64 249.6 223 61.0
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 2.9e-64 249.2 208 59.1
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 3.7e-64 248.8 188 68.1
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 4.9e-64 248.4 218 60.1
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 8.3e-64 247.7 200 62.0
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 1.1e-63 247.3 213 58.2
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.9e-63 246.5 191 66.0
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 2.4e-63 246.1 201 62.2
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 9.2e-63 244.2 171 70.8
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 9.2e-63 244.2 191 65.4
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 9.2e-63 244.2 187 66.3
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 2.7e-62 242.7 200 60.0
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.7e-62 242.7 201 60.2
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 2.7e-62 242.7 187 63.6
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 6.0e-62 241.5 191 64.9
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 1.3e-61 240.4 199 61.8
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 2.3e-61 239.6 191 64.4
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 5.6e-60 235.0 195 62.6
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 2.1e-59 233.0 205 60.0
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 2.1e-59 233.0 205 60.0
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 2.8e-59 232.6 193 65.3
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 3.1e-58 229.2 200 62.0
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 8.9e-58 227.6 194 62.9
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 1.5e-57 226.9 194 62.4
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.5e-57 226.9 186 59.7
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 2.0e-57 226.5 205 59.5
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 2.6e-57 226.1 193 62.7
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 2.6e-57 226.1 193 62.7
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 2.6e-57 226.1 193 62.7
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 9.8e-57 224.2 213 58.7
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 1.3e-56 223.8 194 63.4
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 1.4e-55 220.3 186 62.4
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 3.2e-55 219.2 186 62.9
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 3.2e-55 219.2 195 54.4
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 4.6e-54 215.3 178 62.9
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 4.7e-51 205.3 213 52.6
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 5.4e-47 191.8 192 53.6
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.2e-46 190.7 139 68.3
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 3.0e-45 186.0 219 48.9
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 8.6e-45 184.5 219 48.9
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 8.9e-42 174.5 131 62.6
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.2e-41 174.1 131 61.8
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.3e-37 160.6 190 48.9
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 1.1e-31 141.0 225 39.6
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 9.6e-28 127.9 198 39.4
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.4e-26 124.0 188 43.6
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 6.9e-18 95.1 69 65.2
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 2.2e-16 90.1 98 51.0
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 1.9e-15 87.0 239 27.2
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 1.9e-12 77.0 48 77.1
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 2.2e-08 63.5 233 26.2


User provided reference genes

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