Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00492 Eucalyptus grandis HOM05D005851 ORTHO05D007137 6.0e-63 244.2 140 100.0
Gohir.D12G225000 Gossypium hirsutum HOM05D005851 ORTHO05D007137 3.5e-23 112.1 73 79.5
Gorai.008G241100 Gossypium raimondii HOM05D005851 ORTHO05D007137 3.5e-23 112.1 73 79.5
Lsat_1_v5_gn_6_10241 Lactuca sativa HOM05D005851 ORTHO05D007137 3.5e-23 112.1 75 74.7
Peaxi162Scf00620g00019 Petunia axillaris HOM05D005851 ORTHO05D007137 4.6e-23 111.7 73 72.6
Gohir.A12G222500 Gossypium hirsutum HOM05D005851 ORTHO05D007137 7.9e-23 110.9 72 79.2
Thecc.03G264400 Theobroma cacao HOM05D005851 ORTHO05D007137 7.9e-23 110.9 78 70.5
Nn1g01189 Nelumbo nucifera HOM05D005851 ORTHO05D007137 1.3e-22 110.2 73 78.1
Duzib205G1229 Durio zibethinus HOM05D005851 ORTHO05D007137 3.0e-22 109.0 73 75.3
TAR629G1703 Trochodendron aralioides HOM05D005851 ORTHO05D007137 3.0e-22 109.0 73 78.1
QL12p015621 Quercus lobata HOM05D005851 ORTHO05D007137 3.9e-22 108.6 74 75.7
HanXRQChr09g0246661 Helianthus annuus HOM05D005851 ORTHO05D007137 5.1e-22 108.2 72 73.6
ECA233G5981 Erigeron canadensis HOM05D005851 ORTHO05D007137 6.7e-22 107.8 69 76.8
Cc08_g13500 Coffea canephora HOM05D005851 ORTHO05D007137 8.7e-22 107.5 63 84.1
Sopen08g028040 Solanum pennellii HOM05D005851 ORTHO05D007137 1.1e-21 107.1 73 69.9
Actinidia14484 Actinidia chinensis HOM05D005851 ORTHO05D007137 1.5e-21 106.7 73 76.7
PGR042G2385 Punica granatum HOM05D005851 ORTHO05D007137 1.5e-21 106.7 73 75.3
Solyc08g079680.3 Solanum lycopersicum HOM05D005851 ORTHO05D007137 1.5e-21 106.7 73 69.9
PGSC0003DMG400003949 Solanum tuberosum HOM05D005851 ORTHO05D007137 1.9e-21 106.3 73 69.9
Cpa.g.sc29.62 Carica papaya HOM05D005851 ORTHO05D007137 5.6e-21 104.8 73 76.7
THA.LOC104814025 Tarenaya hassleriana HOM05D005851 ORTHO05D007137 5.6e-21 104.8 69 78.3
Hund14676 Selenicereus undatus HOM05D005851 ORTHO05D007137 7.4e-21 104.4 74 73.0
Atru.chr9.1473 Acer truncatum HOM05D005851 ORTHO05D007137 1.3e-20 103.6 70 72.9
Hma1.2p1_0367F.1_g137205 Hydrangea macrophylla HOM05D005851 ORTHO05D007137 1.3e-20 103.6 73 69.9
AL7G30690 Arabidopsis lyrata HOM05D005851 ORTHO05D007137 1.6e-20 103.2 69 76.8
Rhsim05G0172500 Rhododendron simsii HOM05D005851 ORTHO05D007137 1.6e-20 103.2 76 76.3
A01p14080 Brassica napus HOM05D005851 ORTHO05D007137 3.7e-20 102.1 66 77.3
BraA01t01356Z Brassica rapa HOM05D005851 ORTHO05D007137 3.7e-20 102.1 66 77.3
FvH4_5g00940 Fragaria vesca HOM05D005851 ORTHO05D007137 3.7e-20 102.1 72 75.0
FAN13G0774 Fragaria x ananassa HOM05D005851 ORTHO05D007137 3.7e-20 102.1 72 75.0
FAN18G0436 Fragaria x ananassa HOM05D005851 ORTHO05D007137 3.7e-20 102.1 72 75.0
Nitab4.5_0006122g0020 Nicotiana tabacum HOM05D005851 ORTHO05D007137 3.7e-20 102.1 74 70.3
vmacro00216 Vaccinium macrocarpon HOM05D005851 ORTHO05D007137 3.7e-20 102.1 94 62.8
AT4G22830 Arabidopsis thaliana HOM05D005851 ORTHO05D007137 4.8e-20 101.7 73 74.0
CSS0019536 Camellia sinensis var. sinensis HOM05D005851 ORTHO05D007137 4.8e-20 101.7 94 63.8
CARHR229860 Cardamine hirsuta HOM05D005851 ORTHO05D007137 4.8e-20 101.7 66 75.8
FAN08G3582 Fragaria x ananassa HOM05D005851 ORTHO05D007137 4.8e-20 101.7 79 67.1
CsaV3_3G003320 Cucumis sativus L. HOM05D005851 ORTHO05D007137 6.2e-20 101.3 72 73.6
FAN04G1422 Fragaria x ananassa HOM05D005851 ORTHO05D007137 6.2e-20 101.3 72 72.2
Sed0022049 Sechium edule HOM05D005851 ORTHO05D007137 6.2e-20 101.3 72 73.6
GSVIVG01019923001 Vitis vinifera HOM05D005851 ORTHO05D007137 6.2e-20 101.3 73 74.0
BcaNung01022 Brassica carinata HOM05D005851 ORTHO05D007137 8.1e-20 100.9 60 81.7
Nitab4.5_0000439g0090 Nicotiana tabacum HOM05D005851 ORTHO05D007137 8.1e-20 100.9 74 68.9
RcHm_v2.0_Chr7g0200451 Rosa chinensis HOM05D005851 ORTHO05D007137 8.1e-20 100.9 97 60.8
Carub.0007s1844 Capsella rubella HOM05D005851 ORTHO05D007137 1.1e-19 100.5 73 72.6
CAN.G630.46 Capsicum annuum HOM05D005851 ORTHO05D007137 1.1e-19 100.5 70 70.0
MD06G1068000 Malus domestica HOM05D005851 ORTHO05D007137 1.1e-19 100.5 68 73.5
Sc01g0009080 Simmondsia chinensis HOM05D005851 ORTHO05D007137 1.1e-19 100.5 106 57.5
Migut.E01010 Erythranthe guttata HOM05D005851 ORTHO05D007137 1.4e-19 100.1 72 72.2
Thhalv10026321m.g Eutrema salsugineum HOM05D005851 ORTHO05D007137 1.4e-19 100.1 73 72.6
DCAR_000876 Daucus carota HOM05D005851 ORTHO05D007137 2.4e-19 99.4 62 77.4
Sabra01G0087800 Salix brachista HOM05D005851 ORTHO05D007137 2.4e-19 99.4 109 56.0
CANSAT95G0001 Cannabis sativa HOM05D005851 ORTHO05D007137 3.1e-19 99.0 119 54.6
Lj2g0003035 Lotus japonicus HOM05D005851 ORTHO05D007137 3.1e-19 99.0 52 88.5
BolC1t01669H Brassica oleracea HOM05D005851 ORTHO05D007137 4.0e-19 98.6 111 58.6
ClCG00G000050 Citrullus lanatus HOM05D005851 ORTHO05D007137 4.0e-19 98.6 71 73.2
ClCG00G004660 Citrullus lanatus HOM05D005851 ORTHO05D007137 4.0e-19 98.6 71 73.2
ClCG00G005270 Citrullus lanatus HOM05D005851 ORTHO05D007137 4.0e-19 98.6 71 73.2
ClCG10G003300 Citrullus lanatus HOM05D005851 ORTHO05D007137 4.0e-19 98.6 71 73.2
Manes.02G031801 Manihot esculenta HOM05D005851 ORTHO05D007137 4.0e-19 98.6 110 55.5
SalBow1G3546 Salvia bowleyana HOM05D005851 ORTHO05D007137 4.0e-19 98.6 72 70.8
Ca_06681_v3 Cicer arietinum L. HOM05D000943 ORTHO05D002475 5.3e-19 98.2 53 84.9
Medtr5g011460 Medicago truncatula HOM05D005851 ORTHO05D007137 5.3e-19 98.2 52 86.5
Nitab4.5_0001265g0130 Nicotiana tabacum HOM05D005851 ORTHO05D007137 5.3e-19 98.2 68 73.5
Nitab4.5_0001816g0070 Nicotiana tabacum HOM05D005851 ORTHO05D007137 5.3e-19 98.2 68 73.5
MBI12_g34479_MAGBIO Magnolia biondii HOM05D005851 ORTHO05D007137 6.9e-19 97.8 98 57.1
Oeu064711.1 Olea europaea HOM05D005851 ORTHO05D007137 6.9e-19 97.8 48 91.7
Psat2g180400 Pisum sativum HOM05D005851 ORTHO05D007137 6.9e-19 97.8 52 86.5
TPR.G19565 Trifolium pratense HOM05D005851 ORTHO05D007137 6.9e-19 97.8 52 86.5
AUR62017360 Chenopodium quinoa HOM05D005851 ORTHO05D007137 9.0e-19 97.4 73 68.5
BcaC09g51070 Brassica carinata HOM05D005851 ORTHO05D007137 1.2e-18 97.1 111 57.7
BcaC09g51071 Brassica carinata HOM05D005851 ORTHO05D007137 1.2e-18 97.1 111 57.7
C01p17300 Brassica napus HOM05D005851 ORTHO05D007137 1.2e-18 97.1 111 57.7
Aa31LG6G4910 Aethionema arabicum HOM05D000943 ORTHO05D002475 2.0e-18 96.3 68 76.5
EL10Ac5g12653 Beta vulgaris HOM05D005851 ORTHO05D007137 2.0e-18 96.3 73 68.5
AUR62010535 Chenopodium quinoa HOM05D005851 ORTHO05D007137 2.0e-18 96.3 73 68.5
SGA_v2.0_scaffold144G35989 Striga asiatica HOM05D005851 ORTHO05D007137 2.6e-18 95.9 70 68.6
Potri.001G114800 Populus trichocarpa HOM05D005851 ORTHO05D007137 5.8e-18 94.7 109 53.2
TWI60G0484 Tripterygium wilfordii HOM05D005851 ORTHO05D007137 1.0e-17 94.0 71 71.8
arahy.Tifrunner.gnm1.ann1.BUTP6K Arachis hypogaea HOM05D005851 ORTHO05D007137 1.3e-17 93.6 52 82.7
arahy.Tifrunner.gnm1.ann1.KEJN3W Arachis hypogaea HOM05D005851 ORTHO05D007137 1.3e-17 93.6 52 82.7
CAN.G1394.24 Capsicum annuum HOM05D005851 ORTHO05D007137 1.3e-17 93.6 58 74.1
MSTRG.1924 Avicennia marina HOM05D005851 ORTHO05D007137 1.7e-17 93.2 49 85.7
PGSC0003DMG400012515 Solanum tuberosum HOM05D005851 ORTHO05D007137 1.7e-17 93.2 66 66.7
CDE04G1030 Ceratophyllum demersum HOM05D005851 ORTHO05D007137 2.2e-17 92.8 71 69.0
Solyc08g007580.4 Solanum lycopersicum HOM05D005851 ORTHO05D007137 2.2e-17 92.8 66 65.2
Glyma.01G213300 Glycine max HOM05D005851 ORTHO05D007137 2.9e-17 92.4 52 80.8
Glyma.11G028600 Glycine max HOM05D005851 ORTHO05D007137 2.9e-17 92.4 52 80.8
Ah.02g116130 Amaranthus hybridus HOM05D005851 ORTHO05D007137 3.8e-17 92.0 72 65.3
MELO3C013999.2 Cucumis melo HOM05D005851 ORTHO05D007137 3.8e-17 92.0 105 56.2
Sopen08g003540 Solanum pennellii HOM05D005851 ORTHO05D007137 3.8e-17 92.0 66 65.2
HPP92_025677 Vanilla planifolia HOM05D005851 ORTHO05D007137 4.9e-17 91.7 71 66.2
PSO782G0540 Papaver somniferum HOM05D005851 ORTHO05D007137 6.5e-17 91.3 50 84.0
Phvul.002G151800 Phaseolus vulgaris HOM05D005851 ORTHO05D007137 1.1e-16 90.5 61 70.5
unitig_699.g19746 Utricularia gibba HOM05D002021 ORTHO05D002077 1.4e-16 90.1 50 82.0
SEGI_29987 Sequoiadendron giganteum HOM05D005851 ORTHO05D007137 2.5e-16 89.4 53 75.5
VMungo1215G2211 Vigna mungo HOM05D005851 ORTHO05D007137 2.5e-16 89.4 52 78.8
Pp3c10_11850 Physcomitrium patens HOM05D005851 ORTHO05D007137 3.2e-16 89.0 52 76.9
Ciclev10024430m.g Citrus clementina HOM05D005851 ORTHO05D007137 4.2e-16 88.6 73 65.8
Zm00001eb103020 Zea mays HOM05D005851 ORTHO05D007137 9.3e-16 87.4 50 78.0
ATR0810G218 Amborella trichopoda HOM05D005851 ORTHO05D007137 1.6e-15 86.7 53 71.7
Mapoly0066s0013 Marchantia polymorpha HOM05D005851 ORTHO05D007137 2.1e-15 86.3 48 75.0
Pp3c12_9510 Physcomitrium patens HOM05D005851 ORTHO05D007137 3.5e-15 85.5 73 61.6
Lalb_Chr16g0379871 Lupinus albus HOM05D005851 ORTHO05D007137 6.0e-15 84.7 43 86.0
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 6.0e-15 84.7 100 51.0
CiPaw.11G145200 Carya illinoinensis HOM05D005851 ORTHO05D007137 2.3e-14 82.8 90 53.3
SMO364G0744 Selaginella moellendorffii HOM05D005851 ORTHO05D007137 2.3e-14 82.8 48 72.9
Os04g0379400 Oryza sativa ssp. japonica HOM05D005851 ORTHO05D007137 3.9e-14 82.0 109 47.7
Cre12.g555400 Chlamydomonas reinhardtii HOM05D005851 ORTHO05D007137 6.7e-14 81.3 49 69.4
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 1.5e-13 80.1 49 65.3
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 3.1e-11 72.4 107 41.1
BolC3t15330H Brassica oleracea HOM05D005851 ORTHO05D007137 6.9e-11 71.2 49 77.6
MCO14G294 Micromonas commoda HOM05D005851 ORTHO05D007137 2.2e-09 66.2 45 60.0
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 3.2e-08 62.4 64 51.6
COL.COLO4_23837 Corchorus olitorius HOM05D005851 ORTHO05D007137 1.6e-07 60.1 45 68.9
BcaC09g48268 Brassica carinata HOM05D002423 ORTHO05D007137 6.1e-07 58.2 56 66.1
C01p52310 Brassica napus HOM05D002423 ORTHO05D007137 6.1e-07 58.2 56 66.1
Lj2A204T50 Lonicera japonica HOM05D005851 ORTHO05D007137 5.1e-06 55.1 27 88.9


User provided reference genes

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