Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 2.1e-79 298.9 144 100.0
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 7.2e-64 247.3 141 81.6
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 1.6e-63 246.1 141 80.9
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 4.0e-62 241.5 141 78.7
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 4.0e-62 241.5 141 78.7
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 6.8e-62 240.7 141 80.1
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 2.6e-61 238.8 143 78.3
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 2.8e-60 235.3 141 76.6
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 3.7e-60 235.0 142 78.2
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 4.9e-60 234.6 136 78.7
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 4.1e-59 231.5 136 75.7
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 5.4e-59 231.1 136 75.7
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 9.2e-59 230.3 142 75.4
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 9.2e-59 230.3 139 74.8
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 9.2e-59 230.3 139 74.8
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 9.2e-59 230.3 141 78.0
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 1.6e-58 229.6 142 73.9
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 3.5e-58 228.4 143 74.8
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 5.9e-58 227.6 141 74.5
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 7.8e-58 227.3 138 73.9
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 1.3e-57 226.5 141 73.8
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 2.9e-57 225.3 144 75.7
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 6.6e-57 224.2 137 75.2
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 6.6e-57 224.2 141 73.8
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 8.6e-57 223.8 137 73.7
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 8.6e-57 223.8 145 74.5
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 1.1e-56 223.4 141 73.0
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.5e-56 222.2 142 75.4
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 2.5e-56 222.2 136 75.0
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 2.5e-56 222.2 140 75.0
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 2.5e-56 222.2 138 74.6
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 4.3e-56 221.5 143 73.4
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 9.5e-56 220.3 140 72.9
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 9.5e-56 220.3 140 72.9
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 9.5e-56 220.3 145 74.5
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 1.2e-55 219.9 141 72.3
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 1.6e-55 219.5 140 71.4
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.6e-55 218.4 143 71.3
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 4.7e-55 218.0 140 72.1
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 6.1e-55 217.6 142 73.2
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 8.0e-55 217.2 141 68.8
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 1.0e-54 216.9 141 68.8
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 1.0e-54 216.9 139 72.7
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 4.0e-54 214.9 140 71.4
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 5.2e-54 214.5 142 71.1
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 5.2e-54 214.5 142 71.1
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 6.8e-54 214.2 141 70.2
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 3.4e-53 211.8 183 58.5
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 4.4e-53 211.5 142 69.0
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 4.4e-53 211.5 142 70.4
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 7.5e-53 210.7 141 68.8
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 1.7e-52 209.5 134 73.9
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 1.7e-52 209.5 142 69.7
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 2.2e-52 209.1 141 68.8
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 1.1e-51 206.8 143 69.9
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 3.2e-51 205.3 134 69.4
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 5.4e-51 204.5 142 69.0
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 9.2e-51 203.8 116 77.6
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 1.2e-50 203.4 115 80.0
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 1.2e-50 203.4 143 68.5
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 1.6e-50 203.0 141 70.2
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 4.6e-50 201.4 141 70.9
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 5.0e-49 198.0 136 67.6
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 1.5e-48 196.4 119 74.8
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.5e-48 195.7 145 67.6
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 4.7e-47 191.4 114 78.1
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 4.7e-47 191.4 136 66.2
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 1.8e-46 189.5 169 58.6
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 3.4e-45 185.3 172 53.5
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 5.8e-45 184.5 115 72.2
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 4.9e-44 181.4 118 69.5
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 4.9e-44 181.4 116 70.7
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 6.4e-44 181.0 145 64.1
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 1.6e-42 176.4 116 69.0
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 1.0e-41 173.7 252 40.9
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 1.3e-41 173.3 158 57.6
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 6.6e-41 171.0 102 78.4
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 8.6e-41 170.6 109 72.5
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 4.7e-39 164.9 126 64.3
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 6.2e-39 164.5 126 65.1
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 8.1e-39 164.1 139 58.3
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 2.3e-38 162.5 101 76.2
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 1.3e-36 156.8 136 61.8
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 8.3e-36 154.1 142 55.6
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 1.4e-35 153.3 102 70.6
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 1.9e-35 152.9 102 63.7
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 9.2e-35 150.6 101 73.3
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 1.2e-34 150.2 140 54.3
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 3.5e-34 148.7 89 76.4
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 3.9e-33 145.2 167 46.1
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 2.5e-32 142.5 133 51.1
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 3.3e-32 142.1 141 51.8
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 3.3e-32 142.1 99 68.7
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 5.6e-32 141.4 142 54.2
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 5.6e-32 141.4 143 48.3
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 9.5e-32 140.6 89 75.3
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.2e-30 134.8 108 63.9
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 1.5e-29 133.3 124 51.6
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 2.6e-29 132.5 114 59.6
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 5.8e-29 131.3 75 78.7
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.3e-28 130.2 78 74.4
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 1.3e-28 130.2 83 71.1
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 1.9e-27 126.3 92 67.4
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-26 123.6 116 56.9
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 4.6e-26 121.7 72 79.2
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 9.6e-24 114.0 155 44.5
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 6.2e-23 111.3 127 47.2
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 5.2e-22 108.2 68 73.5
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 9.0e-22 107.5 81 65.4
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.0e-21 106.3 90 60.0
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 7.6e-21 104.4 143 41.3
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 3.8e-20 102.1 138 44.9
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 1.9e-19 99.8 118 42.4
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.5e-13 80.1 59 66.1
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 1.1e-08 63.9 45 68.9
HanXRQChr17g0549671 Helianthus annuus HOM05D007031 ORTHO05D008815 1.3e-07 60.5 40 67.5
Hund14535 Selenicereus undatus HOM05D007031 ORTHO05D008815 2.4e-06 56.2 45 53.3
Haze_07922 Corylus avellana HOM05D007031 ORTHO05D008815 9.0e-06 54.3 39 59.0


User provided reference genes

Program Settings