Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00411 Eucalyptus grandis HOM05D007712 ORTHO05D009755 1.6e-56 222.6 119 100.0
TWI60G0592 Tripterygium wilfordii HOM05D007712 ORTHO05D009755 2.7e-16 89.0 57 86.0
Migut.A01117 Erythranthe guttata HOM05D007712 ORTHO05D009755 4.6e-16 88.2 59 83.1
Gohir.D12G218700 Gossypium hirsutum HOM05D007712 ORTHO05D009755 6.1e-16 87.8 64 75.0
Gorai.008G234300 Gossypium raimondii HOM05D007712 ORTHO05D009755 6.1e-16 87.8 64 75.0
Lj4g0003995 Lotus japonicus HOM05D007712 ORTHO05D009755 1.0e-15 87.0 57 82.5
Thecc.03G249200 Theobroma cacao HOM05D007712 ORTHO05D009755 1.0e-15 87.0 57 82.5
MD04G1062500 Malus domestica HOM05D007712 ORTHO05D009755 3.0e-15 85.5 57 80.7
Prupe.5G067000 Prunus persica HOM05D007712 ORTHO05D009755 3.0e-15 85.5 57 80.7
Medtr4g100770 Medicago truncatula HOM05D007712 ORTHO05D009755 3.9e-15 85.1 58 77.6
MD06G1056600 Malus domestica HOM05D007712 ORTHO05D009755 5.1e-15 84.7 57 78.9
CiPaw.12G051200 Carya illinoinensis HOM05D007712 ORTHO05D009755 1.1e-14 83.6 57 82.5
Lsat_1_v5_gn_6_18000 Lactuca sativa HOM05D007712 ORTHO05D009755 1.5e-14 83.2 57 77.2
Psat4g072600 Pisum sativum HOM05D007712 ORTHO05D009755 1.5e-14 83.2 64 73.4
CSS0007152 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 2.0e-14 82.8 57 77.2
Nn1g00955 Nelumbo nucifera HOM05D007712 ORTHO05D009755 2.0e-14 82.8 81 56.8
RcHm_v2.0_Chr7g0203631 Rosa chinensis HOM05D007712 ORTHO05D009755 2.0e-14 82.8 57 80.7
CARHR223220 Cardamine hirsuta HOM05D007712 ORTHO05D009755 2.5e-14 82.4 64 73.4
Glyma.17G143000 Glycine max HOM05D007712 ORTHO05D009755 3.3e-14 82.0 88 58.0
Potri.001G156500 Populus trichocarpa HOM05D007712 ORTHO05D009755 4.3e-14 81.6 58 77.6
HanXRQChr16g0510951 Helianthus annuus HOM05D007712 ORTHO05D009755 5.7e-14 81.3 59 72.9
Nn6g33914 Nelumbo nucifera HOM05D007712 ORTHO05D009755 5.7e-14 81.3 57 78.9
AL7G38040 Arabidopsis lyrata HOM05D007712 ORTHO05D009755 7.4e-14 80.9 64 71.9
Gohir.A12G216100 Gossypium hirsutum HOM05D007712 ORTHO05D009755 9.7e-14 80.5 58 74.1
CiPaw.11G080700 Carya illinoinensis HOM05D007712 ORTHO05D009755 1.3e-13 80.1 57 77.2
Duzib068G1393 Durio zibethinus HOM05D007712 ORTHO05D009755 1.3e-13 80.1 51 82.4
Sp7g15330 Schrenkiella parvula HOM05D007712 ORTHO05D009755 1.3e-13 80.1 72 63.9
AT4G16695 Arabidopsis thaliana HOM05D007712 ORTHO05D009755 1.7e-13 79.7 64 70.3
COL.COLO4_37150 Corchorus olitorius HOM05D007712 ORTHO05D009755 1.7e-13 79.7 58 72.4
Haze_07896 Corylus avellana HOM05D007712 ORTHO05D009755 1.7e-13 79.7 96 51.0
Duzib205G0100 Durio zibethinus HOM05D007712 ORTHO05D009755 1.7e-13 79.7 58 74.1
Potri.003G078100 Populus trichocarpa HOM05D007712 ORTHO05D009755 1.7e-13 79.7 51 82.4
CANSAT21G0844 Cannabis sativa HOM05D007712 ORTHO05D009755 2.2e-13 79.3 53 77.4
Glyma.05G061200 Glycine max HOM05D007712 ORTHO05D009755 2.2e-13 79.3 52 78.8
Cpa.g.sc29.177 Carica papaya HOM05D007712 ORTHO05D009755 2.8e-13 79.0 51 82.4
VMungo0251G2826 Vigna mungo HOM05D007712 ORTHO05D009755 2.8e-13 79.0 62 71.0
Ca_21974_v3 Cicer arietinum L. HOM05D007712 ORTHO05D009755 4.8e-13 78.2 52 76.9
ClCG01G004140 Citrullus lanatus HOM05D007712 ORTHO05D009755 4.8e-13 78.2 85 55.3
Manes.02G041000 Manihot esculenta HOM05D007712 ORTHO05D009755 4.8e-13 78.2 60 71.7
PGR031G2779 Punica granatum HOM05D007712 ORTHO05D009755 4.8e-13 78.2 51 78.4
Manes.01G082000 Manihot esculenta HOM05D007712 ORTHO05D009755 6.3e-13 77.8 58 74.1
PSO063G7306 Papaver somniferum HOM05D007712 ORTHO05D009755 8.2e-13 77.4 57 71.9
C01p25890 Brassica napus HOM05D007712 ORTHO05D009755 1.1e-12 77.0 58 72.4
CSS0012443 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 1.1e-12 77.0 51 78.4
Ciclev10023737m.g Citrus clementina HOM05D007712 ORTHO05D009755 1.1e-12 77.0 66 66.7
DCAR_006839 Daucus carota HOM05D007712 ORTHO05D009755 1.4e-12 76.6 51 78.4
EL10Ac5g12378 Beta vulgaris HOM05D007712 ORTHO05D009755 1.8e-12 76.3 51 78.4
Lalb_Chr16g0386781 Lupinus albus HOM05D007712 ORTHO05D009755 1.8e-12 76.3 57 71.9
Aa31LG2G12880 Aethionema arabicum HOM05D007712 ORTHO05D009755 2.4e-12 75.9 58 72.4
A01p20590 Brassica napus HOM05D007712 ORTHO05D009755 2.4e-12 75.9 51 78.4
BraA01t01987Z Brassica rapa HOM05D007712 ORTHO05D009755 2.4e-12 75.9 51 78.4
MELO3C005524.2 Cucumis melo HOM05D007712 ORTHO05D009755 2.4e-12 75.9 50 78.0
Sed0021045 Sechium edule HOM05D007712 ORTHO05D009755 2.4e-12 75.9 50 78.0
Solyc08g078480.3 Solanum lycopersicum HOM05D007712 ORTHO05D009755 2.4e-12 75.9 59 67.8
PGSC0003DMG402004821 Solanum tuberosum HOM05D007712 ORTHO05D009755 2.4e-12 75.9 59 67.8
BolC1t02534H Brassica oleracea HOM05D007712 ORTHO05D009755 3.1e-12 75.5 50 80.0
Lalb_Chr05g0221211 Lupinus albus HOM05D007712 ORTHO05D009755 3.1e-12 75.5 57 70.2
Carub.0007s2470 Capsella rubella HOM05D007712 ORTHO05D009755 4.1e-12 75.1 58 72.4
HanXRQChr11g0345641 Helianthus annuus HOM05D007712 ORTHO05D009755 4.1e-12 75.1 53 73.6
Hma1.2p1_0316F.1_g122970 Hydrangea macrophylla HOM05D007712 ORTHO05D009755 4.1e-12 75.1 51 78.4
BcaNung00160 Brassica carinata HOM05D007712 ORTHO05D009755 5.3e-12 74.7 58 70.7
TAR629G1768 Trochodendron aralioides HOM05D007712 ORTHO05D009755 5.3e-12 74.7 56 71.4
HanXRQChr13g0400821 Helianthus annuus HOM05D007712 ORTHO05D009755 6.9e-12 74.3 53 73.6
DCAR_008500 Daucus carota HOM05D007712 ORTHO05D009755 1.2e-11 73.6 51 72.5
PSO782G1928 Papaver somniferum HOM05D007712 ORTHO05D009755 1.5e-11 73.2 51 74.5
Phvul.003G221800 Phaseolus vulgaris HOM05D007712 ORTHO05D009755 1.5e-11 73.2 52 75.0
THA.LOC104815500 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 2.0e-11 72.8 58 72.4
Duzib268G1849 Durio zibethinus HOM05D007712 ORTHO05D009755 3.4e-11 72.0 75 58.7
Nitab4.5_0002289g0090 Nicotiana tabacum HOM05D007712 ORTHO05D009755 5.9e-11 71.2 55 65.5
BcaC06g33508 Brassica carinata HOM05D007712 ORTHO05D009755 7.7e-11 70.9 48 79.2
C07p48200 Brassica napus HOM05D007712 ORTHO05D009755 7.7e-11 70.9 48 79.2
BolC7t45343H Brassica oleracea HOM05D007712 ORTHO05D009755 7.7e-11 70.9 48 79.2
vmacro00192 Vaccinium macrocarpon HOM05D007712 ORTHO05D009755 1.3e-10 70.1 43 76.7
HPP92_021033 Vanilla planifolia HOM05D007712 ORTHO05D009755 1.3e-10 70.1 52 69.2
HPP92_027434 Vanilla planifolia HOM05D007712 ORTHO05D009755 1.3e-10 70.1 52 69.2
Nitab4.5_0001381g0130 Nicotiana tabacum HOM05D007712 ORTHO05D009755 1.7e-10 69.7 54 64.8
SHI02516 Sapria himalayana HOM05D007712 ORTHO05D009755 1.7e-10 69.7 50 76.0
ATR0317G046 Amborella trichopoda HOM05D007712 ORTHO05D009755 2.2e-10 69.3 51 68.6
Pp3c5_22940 Physcomitrium patens HOM05D007712 ORTHO05D009755 6.5e-10 67.8 54 66.7
CAN.G1178.28 Capsicum annuum HOM05D007712 ORTHO05D009755 1.4e-09 66.6 53 64.2
BraA08t33255Z Brassica rapa HOM05D007712 ORTHO05D009755 4.2e-09 65.1 49 73.5
Mapoly0033s0142 Marchantia polymorpha HOM05D007712 ORTHO05D009755 4.2e-09 65.1 51 66.7
A03p50120 Brassica napus HOM05D007712 ORTHO05D009755 2.7e-08 62.4 38 78.9
CBR_g755 Chara braunii HOM05D007712 ORTHO05D009755 2.7e-08 62.4 49 67.3
Os03g0102000 Oryza sativa ssp. japonica HOM05D007712 ORTHO05D009755 4.7e-08 61.6 57 59.6
unitig_744.g24472 Utricularia gibba HOM05D007712 ORTHO05D009755 6.1e-08 61.2 72 55.6
THA.LOC104815513 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 5.1e-07 58.2 42 78.6


User provided reference genes

Program Settings