Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 4.7e-256 887.5 489 100.0
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 1.9e-172 609.8 448 66.5
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 5.7e-169 598.2 460 65.7
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 5.3e-167 591.7 455 68.1
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 1.5e-166 590.1 457 70.7
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.0e-166 589.7 453 66.0
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 4.5e-166 588.6 451 64.3
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.7e-165 586.6 453 66.0
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 1.1e-164 583.9 453 72.0
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 4.2e-164 582.0 451 72.9
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.7e-163 579.3 454 70.3
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.4e-162 577.0 449 64.6
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 3.9e-162 575.5 449 64.6
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 5.1e-162 575.1 449 65.3
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 5.7e-161 571.6 473 65.1
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 5.7e-161 571.6 452 65.0
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 1.8e-159 566.6 457 70.9
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 3.1e-159 565.8 449 64.4
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 5.3e-159 565.1 458 64.6
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.2e-158 563.9 450 62.9
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 3.5e-158 562.4 451 67.4
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 1.0e-157 560.8 450 62.4
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 8.5e-157 557.8 450 62.2
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 1.9e-156 556.6 452 69.2
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 7.2e-156 554.7 450 61.8
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 9.4e-156 554.3 451 63.0
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.6e-155 553.5 451 67.8
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 8.0e-155 551.2 449 67.7
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 8.0e-155 551.2 451 67.2
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 4.0e-154 548.9 451 62.3
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 8.8e-154 547.7 452 66.6
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 5.7e-153 545.0 453 64.0
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 7.5e-153 544.7 451 62.1
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 1.3e-152 543.9 449 67.0
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 6.3e-152 541.6 451 63.0
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 3.1e-151 539.3 451 61.4
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 1.6e-150 537.0 453 61.8
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 2.0e-150 536.6 453 60.7
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 1.3e-149 533.9 451 63.9
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.9e-149 532.7 459 64.9
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 5.0e-149 531.9 449 61.5
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 6.5e-149 531.6 450 60.4
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.5e-148 530.4 451 61.2
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 2.1e-147 526.6 454 59.3
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 2.7e-147 526.2 460 61.5
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 6.1e-147 525.0 456 59.0
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 1.0e-146 524.2 460 61.3
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 1.8e-146 523.5 468 60.9
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 3.0e-146 522.7 466 57.1
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 5.2e-146 521.9 305 81.0
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 5.2e-146 521.9 458 62.0
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 2.0e-145 520.0 450 57.8
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.3e-144 517.3 449 59.2
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.3e-144 517.3 453 64.5
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 1.7e-144 516.9 463 61.3
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 8.3e-144 514.6 467 59.7
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 5.9e-142 508.4 465 58.5
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 2.9e-141 506.1 463 58.5
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 3.8e-141 505.8 465 58.3
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 3.8e-141 505.8 456 58.6
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 6.5e-141 505.0 454 59.5
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 4.7e-139 498.8 406 62.3
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 4.0e-138 495.7 306 74.8
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 1.5e-137 493.8 304 74.3
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 2.6e-137 493.0 458 57.4
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 4.4e-137 492.3 460 57.4
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 5.7e-137 491.9 295 78.0
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 9.8e-137 491.1 449 63.0
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 1.3e-136 490.7 458 57.0
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 2.2e-136 490.0 413 61.0
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 3.7e-136 489.2 452 57.5
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.1e-135 487.6 450 61.3
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 1.4e-135 487.3 452 60.6
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 1.4e-135 487.3 456 61.0
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 3.1e-135 486.1 311 72.0
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 3.1e-135 486.1 302 75.2
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 3.5e-134 482.6 454 57.5
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 5.0e-133 478.8 302 74.2
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 6.6e-133 478.4 302 74.2
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 4.3e-132 475.7 307 73.0
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 2.1e-131 473.4 470 57.0
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 2.1e-131 473.4 479 59.9
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 3.6e-131 472.6 457 56.2
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 4.4e-129 465.7 420 60.0
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 3.7e-128 462.6 515 50.1
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 6.4e-128 461.8 304 69.1
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 5.0e-125 452.2 393 69.5
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 1.1e-124 451.1 466 54.1
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 6.4e-120 435.3 294 70.1
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.6e-118 430.6 377 70.0
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 1.6e-115 420.6 279 69.2
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 5.4e-111 405.6 312 60.6
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 5.4e-111 405.6 312 60.6
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 6.0e-110 402.1 311 62.1
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 3.6e-107 392.9 306 61.4
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 1.8e-106 390.6 266 69.2
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.3e-106 390.2 233 77.7
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 4.0e-106 389.4 454 45.8
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 8.9e-106 388.3 310 61.3
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 2.2e-104 383.6 356 65.7
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 1.0e-101 374.8 386 57.3
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.4e-98 363.6 347 54.8
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 5.2e-98 362.5 308 57.8
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 3.8e-96 356.3 219 74.9
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 4.8e-91 339.3 386 54.4
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 1.8e-82 310.8 201 72.6
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 1.0e-72 278.5 208 63.5
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 1.0e-72 278.5 208 63.5
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 2.7e-70 270.4 265 47.9
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 3.0e-69 266.9 201 66.7
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 4.8e-67 259.6 279 43.0
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 4.5e-57 226.5 119 86.6
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 6.5e-48 196.1 192 51.6
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 5.7e-44 183.0 263 44.9
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 1.6e-41 174.9 134 60.4
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.0e-37 162.2 119 63.9
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 1.4e-29 135.2 80 70.0
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.3e-27 128.6 70 87.1
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 8.3e-27 125.9 107 55.1
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 1.4e-21 108.6 76 65.8
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 2.3e-21 107.8 68 67.6
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 1.7e-16 91.7 76 56.6
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 1.4e-13 82.0 54 68.5
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 3.2e-10 70.9 121 29.8
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.0e-08 65.9 59 45.8
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 1.2e-06 58.9 39 59.0


User provided reference genes

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