Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 5.0e-232 807.4 395 100.0
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 2.8e-126 456.1 389 59.6
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 6.3e-126 454.9 375 58.7
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 4.1e-125 452.2 386 59.8
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 2.2e-123 446.4 375 58.9
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 1.1e-122 444.1 356 60.7
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 3.2e-122 442.6 385 60.0
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 5.5e-122 441.8 371 60.4
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 9.4e-122 441.0 380 60.8
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 3.9e-120 435.6 379 58.0
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 1.5e-119 433.7 379 59.6
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 5.7e-119 431.8 385 57.7
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.4e-117 427.2 373 56.6
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 2.0e-116 423.3 385 55.8
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.3e-115 420.6 392 55.1
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 8.5e-115 417.9 384 56.0
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 9.4e-114 414.5 382 56.5
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 9.4e-114 414.5 376 57.2
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 8.0e-113 411.4 349 58.5
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 1.5e-111 407.1 386 54.7
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 3.3e-111 406.0 362 56.9
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 7.4e-111 404.8 360 54.7
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 9.7e-111 404.4 375 54.7
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 1.3e-110 404.1 375 54.7
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 7.0e-109 398.3 384 50.8
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 1.2e-108 397.5 392 52.6
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 2.0e-108 396.7 383 55.4
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 7.7e-108 394.8 345 57.4
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 1.3e-107 394.0 335 58.2
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 1.7e-107 393.7 365 55.6
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 3.8e-107 392.5 361 52.9
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 2.5e-106 389.8 376 53.2
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 2.5e-106 389.8 383 51.7
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 7.2e-106 388.3 361 55.7
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 9.4e-106 387.9 383 52.2
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 9.4e-106 387.9 377 53.8
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 2.7e-105 386.3 381 51.7
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 1.8e-104 383.6 366 53.0
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 1.8e-104 383.6 363 54.3
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 5.2e-104 382.1 351 55.3
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 1.5e-103 380.6 352 54.3
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 2.2e-102 376.7 457 46.8
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 2.8e-102 376.3 344 55.5
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 3.7e-102 375.9 372 54.3
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 6.5e-99 365.2 356 51.7
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 8.5e-99 364.8 373 50.4
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 2.5e-98 363.2 376 49.7
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 4.2e-98 362.5 372 48.4
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 7.2e-98 361.7 375 51.5
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 9.4e-98 361.3 354 50.6
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 9.4e-98 361.3 356 51.1
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 1.6e-97 360.5 351 50.7
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 4.7e-97 359.0 353 49.6
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 8.0e-97 358.2 364 48.6
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 1.0e-96 357.8 354 50.0
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 1.4e-96 357.5 386 47.4
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.8e-96 357.1 377 50.9
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 1.8e-96 357.1 343 53.4
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 3.0e-96 356.3 357 49.0
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 8.8e-96 354.8 374 48.4
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 5.7e-95 352.1 351 50.4
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 7.5e-95 351.7 298 57.0
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 1.3e-94 350.9 352 48.3
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 3.7e-94 349.4 388 49.5
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 4.8e-94 349.0 362 50.3
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 7.0e-93 345.1 358 50.6
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 3.5e-92 342.8 381 48.6
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 4.5e-92 342.4 394 46.4
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 1.5e-90 337.4 369 49.6
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 2.5e-90 336.7 353 48.7
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 5.5e-90 335.5 365 49.3
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 2.8e-89 333.2 373 47.7
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 2.8e-89 333.2 346 48.8
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 3.6e-89 332.8 359 46.8
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 4.7e-89 332.4 358 47.2
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 3.0e-88 329.7 375 48.8
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 6.8e-88 328.6 360 47.8
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 1.4e-85 320.9 357 48.2
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 3.5e-84 316.2 356 47.5
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 4.5e-84 315.8 405 45.9
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 4.5e-84 315.8 367 45.5
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 1.3e-83 314.3 331 47.7
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 6.6e-83 312.0 374 47.1
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 7.5e-79 298.5 329 47.7
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 1.2e-76 291.2 266 54.5
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 2.5e-74 283.5 333 42.9
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 1.2e-73 281.2 313 45.4
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 1.6e-73 280.8 363 40.2
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 1.2e-71 274.6 244 57.4
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 2.0e-71 273.9 476 35.5
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 1.3e-70 271.2 396 42.4
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 6.8e-64 248.8 284 45.4
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.2e-57 228.0 264 45.1
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 1.2e-55 221.5 182 59.9
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 2.0e-55 220.7 354 37.9
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 7.6e-55 218.8 232 47.4
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 2.9e-54 216.9 304 41.8
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 4.9e-54 216.1 283 39.9
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 1.1e-53 214.9 347 37.2
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 7.1e-53 212.2 199 54.8
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 1.2e-52 211.5 192 51.6
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 3.6e-49 199.9 231 41.6
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 8.1e-41 172.2 328 33.8
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 3.4e-39 166.8 126 66.7
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 9.9e-39 165.2 227 39.6
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.7e-38 164.5 157 52.2
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 2.4e-37 160.6 245 33.5
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 2.1e-33 147.5 116 55.2
arahy.Tifrunner.gnm1.ann1.PE2WYP Arachis hypogaea HOM05D006624 ORTHO05D008209 2.6e-31 140.6 191 44.0
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 3.0e-27 127.1 238 33.2
Peaxi162Scf00084g00918 Petunia axillaris HOM05D006624 ORTHO05D008209 5.8e-23 112.8 122 48.4
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 1.0e-22 112.1 235 29.8
Gorai.007G312600 Gossypium raimondii HOM05D000724 ORTHO05D011687 5.5e-21 106.3 261 29.5
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 6.9e-16 89.4 84 45.2
Os03g0100050 Oryza sativa ssp. japonica HOM05D006624 ORTHO05D008209 1.2e-15 88.6 99 44.4
Gohir.D07G137350 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.6e-12 77.0 80 50.0
Gohir.D08G202425 Gossypium hirsutum HOM05D006624 ORTHO05D008209 4.6e-12 76.6 80 50.0
Gohir.D11G288766 Gossypium hirsutum HOM05D006624 ORTHO05D008209 6.1e-12 76.3 80 50.0
Gohir.D07G075451 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.4e-11 75.1 80 48.8
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 2.3e-11 74.3 85 41.2
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.0e-11 73.9 76 42.1
arahy.Tifrunner.gnm1.ann1.HID3FF Arachis hypogaea HOM05D006624 ORTHO05D008209 1.5e-10 71.6 116 37.9
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 4.3e-10 70.1 69 42.0
CBR_g30426 Chara braunii HOM05D006624 ORTHO05D008209 3.1e-08 63.9 58 58.6


User provided reference genes

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