Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 2.9e-70 268.5 139 100.0
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 7.5e-34 147.5 132 62.9
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 7.3e-29 131.0 136 59.6
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 2.0e-26 122.9 128 59.4
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 1.3e-25 120.2 139 55.4
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 2.2e-25 119.4 141 56.7
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 3.7e-25 118.6 140 57.1
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 4.9e-25 118.2 133 57.1
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.1e-24 117.1 140 56.4
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 5.4e-24 114.8 145 54.5
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 1.6e-23 113.2 127 56.7
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 2.1e-23 112.8 141 53.9
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 6.0e-23 111.3 134 56.7
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 1.0e-22 110.5 134 56.7
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 1.7e-22 109.8 135 54.1
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 8.6e-22 107.5 138 52.9
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 1.1e-21 107.1 138 51.4
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 1.2e-20 103.6 139 53.2
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 1.6e-20 103.2 137 51.8
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 2.1e-20 102.8 133 49.6
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 4.7e-20 101.7 128 52.3
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 4.7e-20 101.7 128 52.3
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 8.1e-20 100.9 130 47.7
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 8.1e-20 100.9 134 50.7
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 1.5e-18 96.7 166 45.8
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 3.4e-18 95.5 137 49.6
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 5.8e-18 94.7 117 59.0
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 5.8e-18 94.7 133 48.1
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 5.8e-18 94.7 92 66.3
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 7.6e-18 94.4 137 48.9
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 1.3e-17 93.6 136 50.0
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 2.2e-17 92.8 145 50.3
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 2.9e-17 92.4 167 43.7
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 3.8e-17 92.0 133 48.1
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 4.9e-17 91.7 133 50.4
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 6.4e-17 91.3 123 52.0
DCAR_005623 Daucus carota HOM05D007324 ORTHO05D007884 1.1e-16 90.5 120 53.3
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 1.1e-16 90.5 173 45.1
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 2.1e-15 86.3 126 50.0
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 3.5e-15 85.5 112 50.9
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 1.0e-14 84.0 103 55.3
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 1.0e-14 84.0 103 55.3
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 3.9e-14 82.0 108 53.7
Rhsim07G0125700 Rhododendron simsii HOM05D007324 ORTHO05D007884 5.1e-14 81.6 131 48.1
Peaxi162Scf00615g00021 Petunia axillaris HOM05D007324 ORTHO05D007884 6.6e-14 81.3 136 45.6
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 8.7e-14 80.9 110 57.3
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 8.7e-14 80.9 143 44.8
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 1.9e-13 79.7 74 63.5
CSS0050429 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 3.3e-13 79.0 137 42.3
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 5.6e-13 78.2 135 45.9
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 1.3e-12 77.0 110 56.4
COL.COLO4_17062 Corchorus olitorius HOM05D007324 ORTHO05D007884 1.3e-12 77.0 149 42.3
Lj4g0022663 Lotus japonicus HOM05D007324 ORTHO05D007884 1.6e-12 76.6 135 45.9
vmacro22242 Vaccinium macrocarpon HOM05D007324 ORTHO05D007884 1.6e-12 76.6 110 49.1
TPR.G29033 Trifolium pratense HOM05D007324 ORTHO05D007884 2.1e-12 76.3 126 46.8
Actinidia09218 Actinidia chinensis HOM05D007324 ORTHO05D007884 3.6e-12 75.5 129 43.4
Nn6g33613 Nelumbo nucifera HOM05D007324 ORTHO05D007884 3.6e-12 75.5 135 47.4
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 4.8e-12 75.1 119 47.9
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 4.8e-12 75.1 133 48.1
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 4.8e-12 75.1 133 48.1
Thecc.03G229800 Theobroma cacao HOM05D007324 ORTHO05D007884 8.1e-12 74.3 134 43.3
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 1.1e-11 73.9 110 50.0
FAN13G0501 Fragaria x ananassa HOM05D007324 ORTHO05D007884 1.1e-11 73.9 144 43.8
Potri.001G143700 Populus trichocarpa HOM05D007324 ORTHO05D007884 1.1e-11 73.9 133 43.6
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 2.4e-11 72.8 103 52.4
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 5.3e-11 71.6 94 53.2
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 5.3e-11 71.6 123 39.8
FvH4_5g21830 Fragaria vesca HOM05D007324 ORTHO05D007884 9.0e-11 70.9 89 56.2
ClCG10G001740 Citrullus lanatus HOM05D007324 ORTHO05D007884 2.6e-10 69.3 87 55.2
MELO3C032260.2 Cucumis melo HOM05D007324 ORTHO05D007884 2.6e-10 69.3 149 42.3
Ca_22071_v3 Cicer arietinum L. HOM05D007324 ORTHO05D007884 4.4e-10 68.6 131 44.3
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 7.6e-10 67.8 94 48.9
Thhalv10017485m.g Eutrema salsugineum HOM05D011082 ORTHO05D007884 7.6e-10 67.8 81 53.1
FAN18G2652 Fragaria x ananassa HOM05D007324 ORTHO05D007884 7.6e-10 67.8 89 55.1
Nitab4.5_0008428g0010 Nicotiana tabacum HOM05D007324 ORTHO05D007884 7.6e-10 67.8 133 39.8
Aa31LG2G13400 Aethionema arabicum HOM05D007324 ORTHO05D007884 9.9e-10 67.4 136 43.4
MBI04_g22943_MAGBIO Magnolia biondii HOM05D007324 ORTHO05D007884 9.9e-10 67.4 135 42.2
FvH4_5g21820 Fragaria vesca HOM05D031477 ORTHO05D007884 2.2e-09 66.2 127 40.9
FAN04G2965 Fragaria x ananassa HOM05D007324 ORTHO05D007884 3.8e-09 65.5 89 52.8
SalBow1G4617 Salvia bowleyana HOM05D007324 ORTHO05D007884 6.4e-09 64.7 133 39.1
SalBow8G4924 Salvia bowleyana HOM05D007324 ORTHO05D007884 6.4e-09 64.7 133 39.1
FAN08G0008 Fragaria x ananassa HOM05D007324 ORTHO05D007884 8.4e-09 64.3 89 52.8
Hma1.2p1_0585F.1_g183650 Hydrangea macrophylla HOM05D007324 ORTHO05D007884 2.1e-07 59.7 109 45.0
Sp1g28340 Schrenkiella parvula HOM05D007324 ORTHO05D007884 2.1e-07 59.7 123 41.5
BcaB07g32955 Brassica carinata HOM05D007324 ORTHO05D007884 3.5e-07 58.9 109 43.1
CANSAT21G2393 Cannabis sativa HOM05D007324 ORTHO05D007884 3.5e-07 58.9 137 40.1
MELO3C008930.2 Cucumis melo HOM05D003436 ORTHO05D003674 3.5e-07 58.9 133 37.6
Prupe.5G039400 Prunus persica HOM05D007324 ORTHO05D007884 4.6e-07 58.5 52 69.2
Nn1g00546 Nelumbo nucifera HOM05D007324 ORTHO05D007884 6.0e-07 58.2 107 44.9
Aa31sc24G30 Aethionema arabicum HOM05D003436 ORTHO05D003674 1.0e-06 57.4 126 42.1
CANSAT64G0020 Cannabis sativa HOM05D003436 ORTHO05D003674 1.0e-06 57.4 139 38.8
Sp4g17510 Schrenkiella parvula HOM05D011082 ORTHO05D007884 1.0e-06 57.4 86 48.8
CsaV3_4G030630 Cucumis sativus L. HOM05D003436 ORTHO05D003674 5.1e-06 55.1 133 36.1
ATR0605G384 Amborella trichopoda HOM05D003436 ORTHO05D003674 6.6e-06 54.7 135 39.3
BcaB02g09441 Brassica carinata HOM05D011082 ORTHO05D007884 6.6e-06 54.7 85 47.1


User provided reference genes

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