Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 1.9e-92 342.4 168 100.0
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 1.0e-45 187.2 173 56.6
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 1.2e-41 173.7 175 58.3
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 3.5e-41 172.2 173 51.4
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 5.9e-41 171.4 175 57.1
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 3.8e-40 168.7 173 53.8
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 1.5e-39 166.8 174 54.6
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 2.5e-39 166.0 174 54.6
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 3.2e-39 165.6 173 53.2
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 4.2e-39 165.2 174 54.6
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 5.5e-39 164.9 169 56.2
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 5.5e-39 164.9 173 53.8
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 9.4e-39 164.1 173 52.0
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 1.2e-38 163.7 172 53.5
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 1.4e-37 160.2 173 54.3
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 1.8e-37 159.8 210 49.0
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 1.1e-36 157.1 174 52.3
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 3.3e-36 155.6 173 48.6
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 1.3e-35 153.7 170 50.6
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 2.8e-35 152.5 167 51.5
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 2.8e-35 152.5 173 51.4
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 3.7e-35 152.1 174 52.3
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 3.7e-35 152.1 174 50.6
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 6.3e-35 151.4 173 52.0
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 1.1e-34 150.6 173 49.1
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 3.1e-34 149.1 170 52.4
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 3.1e-34 149.1 175 48.0
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 4.1e-34 148.7 177 48.6
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 4.1e-34 148.7 171 49.1
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 1.6e-33 146.7 175 54.3
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 2.0e-33 146.4 173 52.0
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 2.7e-33 146.0 174 46.6
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 2.7e-33 146.0 176 50.0
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 3.5e-33 145.6 175 46.9
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 3.5e-33 145.6 175 46.9
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 4.5e-33 145.2 172 50.6
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 7.7e-33 144.4 173 49.1
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 7.7e-33 144.4 173 52.0
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 1.0e-32 144.1 173 48.0
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 1.3e-32 143.7 174 50.0
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 2.2e-32 142.9 172 48.3
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 2.2e-32 142.9 170 47.6
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 2.9e-32 142.5 174 48.3
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 3.8e-32 142.1 175 47.4
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 5.0e-32 141.7 173 49.1
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 8.5e-32 141.0 172 45.9
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.1e-31 140.6 170 48.8
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.1e-31 140.6 173 49.1
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 1.5e-31 140.2 173 46.8
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 2.5e-31 139.4 169 47.9
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 3.2e-31 139.0 175 46.3
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 4.2e-31 138.7 173 47.4
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 4.2e-31 138.7 169 45.6
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 4.2e-31 138.7 169 45.6
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 4.2e-31 138.7 169 45.0
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 4.2e-31 138.7 168 45.2
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 4.2e-31 138.7 170 45.9
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 4.2e-31 138.7 169 49.1
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 4.2e-31 138.7 170 47.6
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 5.5e-31 138.3 169 47.3
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 5.5e-31 138.3 173 47.4
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 9.4e-31 137.5 170 47.1
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 1.2e-30 137.1 169 45.0
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 1.2e-30 137.1 170 48.8
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 1.6e-30 136.7 169 44.4
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.6e-30 136.7 170 48.2
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 3.6e-30 135.6 169 44.4
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 3.6e-30 135.6 169 44.4
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 3.6e-30 135.6 168 47.0
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 4.7e-30 135.2 174 47.1
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 4.7e-30 135.2 173 46.8
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 1.0e-29 134.0 173 46.2
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 1.0e-29 134.0 173 45.7
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 1.8e-29 133.3 170 44.7
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 1.8e-29 133.3 170 44.7
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 1.8e-29 133.3 168 46.4
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 4.0e-29 132.1 175 46.9
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 4.0e-29 132.1 170 42.9
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 8.8e-29 131.0 174 48.9
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 8.8e-29 131.0 173 45.1
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 1.5e-28 130.2 224 39.3
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 3.4e-28 129.0 173 47.4
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 3.4e-28 129.0 210 40.5
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 7.5e-28 127.9 273 33.3
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 7.5e-28 127.9 177 42.4
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 9.8e-28 127.5 171 42.1
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 9.8e-28 127.5 171 43.3
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 2.8e-27 125.9 170 42.9
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 2.8e-27 125.9 170 42.9
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 3.7e-27 125.6 119 58.0
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 3.7e-27 125.6 174 47.1
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 4.8e-27 125.2 172 45.9
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 4.8e-27 125.2 173 42.8
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 1.1e-26 124.0 177 43.5
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 1.1e-26 124.0 156 46.8
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 1.4e-26 123.6 172 44.8
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 2.4e-26 122.9 192 44.3
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 3.1e-26 122.5 172 41.9
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 4.1e-26 122.1 173 49.1
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 4.1e-26 122.1 158 48.7
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 4.1e-26 122.1 174 43.7
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 4.1e-26 122.1 164 42.1
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 4.1e-26 122.1 151 46.4
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 5.4e-26 121.7 178 41.0
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 2.0e-25 119.8 252 34.1
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 3.5e-25 119.0 193 43.0
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 5.9e-25 118.2 233 36.5
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 7.7e-25 117.9 170 45.3
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 1.7e-24 116.7 170 40.6
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 1.7e-24 116.7 170 41.2
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 3.8e-24 115.5 173 43.4
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 1.9e-23 113.2 175 41.7
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 7.2e-23 111.3 164 42.1
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 1.2e-22 110.5 165 44.2
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 2.1e-22 109.8 157 44.6
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 2.1e-22 109.8 159 45.3
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 2.7e-22 109.4 157 44.6
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 3.6e-22 109.0 162 45.1
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 3.6e-22 109.0 175 41.1
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 3.6e-22 109.0 81 66.7
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 4.7e-22 108.6 172 41.9
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 6.1e-22 108.2 173 41.0
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 8.0e-22 107.8 188 37.2
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 1.4e-21 107.1 157 42.0
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 1.8e-21 106.7 157 42.7
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 1.8e-21 106.7 157 42.7
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 3.0e-21 105.9 177 37.3
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 4.0e-21 105.5 160 43.1
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 6.8e-21 104.8 159 42.1
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 8.8e-21 104.4 174 39.7
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 1.2e-20 104.0 158 43.0
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 1.5e-20 103.6 157 42.7
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 3.4e-20 102.4 158 42.4
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 3.4e-20 102.4 158 42.4
Nitab4.5_0001276g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 5.7e-20 101.7 79 60.8
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 9.8e-20 100.9 157 42.0
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 9.8e-20 100.9 157 42.0
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 3.7e-19 99.0 170 40.6
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 1.2e-17 94.0 106 49.1
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 4.5e-17 92.0 168 41.1
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 1.3e-16 90.5 71 63.4
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 3.8e-16 89.0 81 50.6
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 8.6e-16 87.8 76 55.3
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 1.2e-14 84.0 168 35.1
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 1.8e-13 80.1 171 35.1
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 1.5e-12 77.0 100 47.0
SEGI_38344 Sequoiadendron giganteum HOM05D004587 ORTHO05D005512 2.6e-12 76.3 79 43.0
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 7.5e-12 74.7 76 47.4
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 7.5e-12 74.7 170 31.8
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 1.7e-11 73.6 99 42.4
Cpa.g.sc90.49 Carica papaya HOM05D004587 ORTHO05D005512 3.7e-11 72.4 99 46.5
Pp3c4_4690 Physcomitrium patens HOM05D004587 ORTHO05D005512 3.7e-11 72.4 92 45.7
Ciclev10033884m.g Citrus clementina HOM05D004587 ORTHO05D005512 5.4e-10 68.6 97 46.4
Nitab4.5_0001276g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 3.9e-08 62.4 105 37.1


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