Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00285 Eucalyptus grandis HOM05D006772 ORTHO05D008367 6.7e-69 263.8 129 100.0
Thecc.03G229400 Theobroma cacao HOM05D006772 ORTHO05D008367 2.0e-41 172.6 129 71.3
Duzib205G2036 Durio zibethinus HOM05D006772 ORTHO05D008367 8.5e-40 167.2 129 68.2
Peaxi162Scf00460g00052 Petunia axillaris HOM05D006772 ORTHO05D008367 1.1e-39 166.8 127 63.0
Potri.003G091400 Populus trichocarpa HOM05D006772 ORTHO05D008367 7.2e-39 164.1 127 65.4
FAN04G3098 Fragaria x ananassa HOM05D006772 ORTHO05D008367 1.2e-38 163.3 126 61.9
Hma1.2p1_0991F.1_g245070 Hydrangea macrophylla HOM05D006772 ORTHO05D008367 1.6e-38 162.9 129 65.9
RcHm_v2.0_Chr7g0209491 Rosa chinensis HOM05D006772 ORTHO05D008367 2.1e-38 162.5 128 61.7
PGSC0003DMG400043394 Solanum tuberosum HOM05D006772 ORTHO05D008367 2.7e-38 162.2 127 61.4
Sopen08g025600 Solanum pennellii HOM05D006772 ORTHO05D008367 3.6e-38 161.8 127 61.4
Cc08_g02570 Coffea canephora HOM05D006772 ORTHO05D008367 4.7e-38 161.4 129 65.9
CSS0016213 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 8.0e-38 160.6 129 65.1
CSS0038918 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 1.0e-37 160.2 129 64.3
FvH4_5g21990 Fragaria vesca HOM05D006772 ORTHO05D008367 1.0e-37 160.2 126 61.1
FAN18G1611 Fragaria x ananassa HOM05D006772 ORTHO05D008367 1.0e-37 160.2 126 61.1
QL12p005804 Quercus lobata HOM05D006772 ORTHO05D008367 1.0e-37 160.2 127 62.2
Solyc08g077020.1 Solanum lycopersicum HOM05D006772 ORTHO05D008367 1.0e-37 160.2 127 60.6
COL.COLO4_17058 Corchorus olitorius HOM05D006772 ORTHO05D008367 1.4e-37 159.8 127 66.1
Sabra03G0061100 Salix brachista HOM05D006772 ORTHO05D008367 1.8e-37 159.5 127 65.4
Nitab4.5_0001666g0010 Nicotiana tabacum HOM05D006772 ORTHO05D008367 3.0e-37 158.7 127 59.8
QL12p005837 Quercus lobata HOM05D006772 ORTHO05D008367 3.0e-37 158.7 127 61.4
Prupe.5G037100 Prunus persica HOM05D006772 ORTHO05D008367 5.2e-37 157.9 130 60.8
PGR042G0478 Punica granatum HOM05D006772 ORTHO05D008367 5.2e-37 157.9 131 65.6
Sabra01G0111500 Salix brachista HOM05D006772 ORTHO05D008367 6.8e-37 157.5 127 61.4
Potri.001G142700 Populus trichocarpa HOM05D006772 ORTHO05D008367 8.8e-37 157.1 127 62.2
FAN08G3182 Fragaria x ananassa HOM05D006772 ORTHO05D008367 2.6e-36 155.6 126 59.5
Manes.17G012000 Manihot esculenta HOM05D006772 ORTHO05D008367 5.7e-36 154.5 131 63.4
TWI15G0236 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 5.7e-36 154.5 130 63.8
Gorai.003G181100 Gossypium raimondii HOM05D006772 ORTHO05D008367 9.8e-36 153.7 129 60.5
CiPaw.12G062700 Carya illinoinensis HOM05D006772 ORTHO05D008367 1.3e-35 153.3 131 60.3
Lsat_1_v5_gn_6_78680 Lactuca sativa HOM05D006772 ORTHO05D008367 1.3e-35 153.3 134 58.2
Gohir.D03G170700 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.7e-35 152.9 129 60.5
Gohir.A03G001600 Gossypium hirsutum HOM05D006772 ORTHO05D008367 2.8e-35 152.1 129 62.0
HanXRQChr03g0084031 Helianthus annuus HOM05D006772 ORTHO05D008367 4.8e-35 151.4 131 58.8
FAN13G1934 Fragaria x ananassa HOM05D006772 ORTHO05D008367 6.3e-35 151.0 119 62.2
MD16G1275100 Malus domestica HOM05D006772 ORTHO05D008367 6.3e-35 151.0 129 58.1
Rhsim07G0126400 Rhododendron simsii HOM05D006772 ORTHO05D008367 6.3e-35 151.0 127 58.3
TAR375G0733 Trochodendron aralioides HOM05D006772 ORTHO05D008367 2.4e-34 149.1 130 60.0
MD06G1033600 Malus domestica HOM05D006772 ORTHO05D008367 3.1e-34 148.7 128 56.2
Eucgr.D02187 Eucalyptus grandis HOM05D006772 ORTHO05D008367 1.6e-33 146.4 128 60.9
Haze_08246 Corylus avellana HOM05D006772 ORTHO05D008367 2.7e-33 145.6 130 59.2
Gohir.D12G211500 Gossypium hirsutum HOM05D006772 ORTHO05D008367 5.9e-33 144.4 127 60.6
VMungo1215G2403 Vigna mungo HOM05D006772 ORTHO05D008367 7.7e-33 144.1 128 57.0
Lj2g0019736 Lotus japonicus HOM05D006772 ORTHO05D008367 1.0e-32 143.7 137 55.5
Sc01g0007510 Simmondsia chinensis HOM05D006772 ORTHO05D008367 1.7e-32 142.9 134 59.7
Ciclev10033079m.g Citrus clementina HOM05D006772 ORTHO05D008367 2.3e-32 142.5 134 59.7
Gohir.A12G208800 Gossypium hirsutum HOM05D006772 ORTHO05D008367 2.3e-32 142.5 127 59.8
Gorai.008G227000 Gossypium raimondii HOM05D006772 ORTHO05D008367 2.3e-32 142.5 127 59.8
TWI60G0285 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 2.9e-32 142.1 130 58.5
Nitab4.5_0000804g0080 Nicotiana tabacum HOM05D006772 ORTHO05D008367 5.0e-32 141.4 129 55.8
arahy.Tifrunner.gnm1.ann1.6N9PAN Arachis hypogaea HOM05D006772 ORTHO05D008367 8.6e-32 140.6 128 57.0
arahy.Tifrunner.gnm1.ann1.WNGN5W Arachis hypogaea HOM05D006772 ORTHO05D008367 8.6e-32 140.6 128 57.0
Medtr5g014370 Medicago truncatula HOM05D006772 ORTHO05D008367 8.6e-32 140.6 131 54.2
Nn6g33607 Nelumbo nucifera HOM05D006772 ORTHO05D008367 8.6e-32 140.6 128 58.6
Aqoxy3G02398 Aquilegia oxysepala HOM05D006772 ORTHO05D008367 1.1e-31 140.2 128 57.8
CANSAT21G2446 Cannabis sativa HOM05D006772 ORTHO05D008367 1.5e-31 139.8 134 53.0
Glyma.05G111700 Glycine max HOM05D006772 ORTHO05D008367 3.2e-31 138.7 128 57.8
Phvul.002G006800 Phaseolus vulgaris HOM05D006772 ORTHO05D008367 3.2e-31 138.7 130 55.4
Nn1g00537 Nelumbo nucifera HOM05D006772 ORTHO05D008367 4.2e-31 138.3 131 58.0
Cfa012424 Carpinus fangiana HOM05D006772 ORTHO05D008367 7.2e-31 137.5 130 56.9
Glyma.11G043000 Glycine max HOM05D006772 ORTHO05D008367 1.6e-30 136.3 127 53.5
Sed0022952 Sechium edule HOM05D006772 ORTHO05D008367 2.1e-30 136.0 132 54.5
Glyma.17G155300 Glycine max HOM05D006772 ORTHO05D008367 2.8e-30 135.6 133 54.1
Ca_24649_v3 Cicer arietinum L. HOM05D006772 ORTHO05D008367 4.7e-30 134.8 130 53.1
DCAR_024967 Daucus carota HOM05D006772 ORTHO05D008367 6.1e-30 134.4 131 58.8
Psat2g173920 Pisum sativum HOM05D006772 ORTHO05D008367 1.0e-29 133.7 133 52.6
ECA240G4560 Erigeron canadensis HOM05D000236 ORTHO05D000192 1.4e-29 133.3 128 54.7
Lalb_Chr16g0379141 Lupinus albus HOM05D006772 ORTHO05D008367 1.8e-29 132.9 128 51.6
VMungo0251G2965 Vigna mungo HOM05D006772 ORTHO05D008367 3.0e-29 132.1 129 52.7
Atru.chr6.1734 Acer truncatum HOM05D006772 ORTHO05D008367 4.0e-29 131.7 129 58.1
Lalb_Chr05g0213971 Lupinus albus HOM05D006772 ORTHO05D008367 1.2e-28 130.2 131 52.7
Sed0027084 Sechium edule HOM05D006772 ORTHO05D008367 3.4e-28 128.6 132 56.8
TPR.G7824 Trifolium pratense HOM05D006772 ORTHO05D008367 3.4e-28 128.6 128 53.1
Ah.12g054950 Amaranthus hybridus HOM05D006772 ORTHO05D008367 9.8e-28 127.1 116 56.0
MELO3C003403.2 Cucumis melo HOM05D006772 ORTHO05D008367 1.1e-26 123.6 140 52.1
Gohir.A11G030300 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.2e-25 120.2 131 50.4
CsaV3_3G049240 Cucumis sativus L. HOM05D006772 ORTHO05D008367 2.0e-25 119.4 139 48.9
Lj4g0015139 Lotus japonicus HOM05D006772 ORTHO05D008367 2.0e-25 119.4 137 48.2
MBI02_g14426_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 2.0e-25 119.4 135 51.9
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 2.3e-24 115.9 128 49.2
PGSC0003DMG400036785 Solanum tuberosum HOM05D006772 ORTHO05D008367 2.9e-24 115.5 94 61.7
PGR031G2239 Punica granatum HOM05D006772 ORTHO05D008367 2.5e-23 112.5 138 47.1
Lj4g0019114 Lotus japonicus HOM05D006772 ORTHO05D008367 7.3e-23 110.9 137 45.3
THA.LOC104807956 Tarenaya hassleriana HOM05D006772 ORTHO05D008367 1.2e-22 110.2 128 47.7
A05p10490 Brassica napus HOM05D006772 ORTHO05D008367 2.8e-22 109.0 130 47.7
BraA05t19987Z Brassica rapa HOM05D006772 ORTHO05D008367 2.8e-22 109.0 130 47.7
CDE08G0662 Ceratophyllum demersum HOM05D006772 ORTHO05D008367 4.7e-22 108.2 118 46.6
BolC4t22934H Brassica oleracea HOM05D006772 ORTHO05D008367 6.1e-22 107.8 130 46.9
BcaB02g09453 Brassica carinata HOM05D006772 ORTHO05D008367 1.0e-21 107.1 130 46.9
BcaB02g09458 Brassica carinata HOM05D006772 ORTHO05D008367 1.0e-21 107.1 130 46.9
BcaB02g09462 Brassica carinata HOM05D006772 ORTHO05D008367 1.0e-21 107.1 130 46.9
BcaC02g11632 Brassica carinata HOM05D006772 ORTHO05D008367 1.0e-21 107.1 130 46.9
C04p12890 Brassica napus HOM05D006772 ORTHO05D008367 1.0e-21 107.1 130 46.9
CARHR129440 Cardamine hirsuta HOM05D006772 ORTHO05D008367 1.4e-21 106.7 130 47.7
MBI05_g46462_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.4e-21 106.7 130 46.2
Aa31LG9G15310 Aethionema arabicum HOM05D006772 ORTHO05D008367 2.3e-21 105.9 133 47.4
BcaB06g28837 Brassica carinata HOM05D006772 ORTHO05D008367 2.3e-21 105.9 130 43.8
Thhalv10017432m.g Eutrema salsugineum HOM05D006772 ORTHO05D008367 2.3e-21 105.9 130 46.2
ATR0564G457 Amborella trichopoda HOM05D006772 ORTHO05D008367 3.0e-21 105.5 135 44.4
AT2G35290 Arabidopsis thaliana HOM05D006772 ORTHO05D008367 3.0e-21 105.5 130 47.7
Carub.0004s1698 Capsella rubella HOM05D006772 ORTHO05D008367 5.2e-21 104.8 128 48.4
Sp4g17500 Schrenkiella parvula HOM05D006772 ORTHO05D008367 5.2e-21 104.8 130 43.8
BcaB02g09448 Brassica carinata HOM05D006772 ORTHO05D008367 6.8e-21 104.4 130 43.1
C04p64260 Brassica napus HOM05D006772 ORTHO05D008367 4.4e-20 101.7 130 43.1
A04p26870 Brassica napus HOM05D006772 ORTHO05D008367 5.7e-20 101.3 130 43.1
BraA04t18187Z Brassica rapa HOM05D006772 ORTHO05D008367 5.7e-20 101.3 130 43.1
Dinv28946 Davidia involucrata HOM05D006772 ORTHO05D008367 7.5e-20 100.9 74 66.2
BcaC02g07718 Brassica carinata HOM05D006772 ORTHO05D008367 6.4e-19 97.8 130 42.3
BolC4t27910H Brassica oleracea HOM05D006772 ORTHO05D008367 6.4e-19 97.8 130 42.3
Gohir.D11G028900 Gossypium hirsutum HOM05D006772 ORTHO05D008367 6.4e-19 97.8 102 50.0
AL4G31320 Arabidopsis lyrata HOM05D006772 ORTHO05D008367 1.4e-18 96.7 110 49.1
SEGI_37864 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 2.4e-18 95.9 110 44.5
CiPaw.11G092300 Carya illinoinensis HOM05D006772 ORTHO05D008367 9.2e-18 94.0 132 42.4
Os03g0170100 Oryza sativa ssp. japonica HOM05D006772 ORTHO05D008367 7.8e-17 90.9 121 47.1
Gorai.007G031500 Gossypium raimondii HOM05D006772 ORTHO05D008367 2.5e-15 85.9 92 47.8
HPP92_011259 Vanilla planifolia HOM05D006772 ORTHO05D008367 2.5e-15 85.9 131 41.2
Zm00001eb402290 Zea mays HOM05D006772 ORTHO05D008367 3.3e-15 85.5 116 43.1
Peaxi162Scf00102g00514 Petunia axillaris HOM05D006772 ORTHO05D008367 3.6e-14 82.0 128 40.6
SEGI_18606 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 6.8e-13 77.8 93 46.2
EL10Ac5g12135 Beta vulgaris HOM05D003523 ORTHO05D008367 2.6e-12 75.9 69 53.6
MBI02_g18931_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 2.2e-11 72.8 47 74.5
Mapoly0047s0021 Marchantia polymorpha HOM05D001618 ORTHO05D001486 3.2e-10 68.9 112 34.8
Pp3c1_8870 Physcomitrium patens HOM05D006772 ORTHO05D008367 7.8e-09 64.3 123 32.5
SMO118G0108 Selaginella moellendorffii HOM05D000204 ORTHO05D001486 8.6e-08 60.8 96 35.4
SMO118G0016 Selaginella moellendorffii HOM05D000204 ORTHO05D001668 1.1e-07 60.5 96 35.4
Phvul.009G223900 Phaseolus vulgaris HOM05D001618 ORTHO05D001486 4.3e-07 58.5 87 39.1
Ah.14g084670 Amaranthus hybridus HOM05D001618 ORTHO05D001486 5.6e-07 58.2 87 34.5
Thecc.07G153100 Theobroma cacao HOM05D001618 ORTHO05D001486 7.3e-07 57.8 118 28.8
Glyma.09G073400 Glycine max HOM05D001618 ORTHO05D001486 9.5e-07 57.4 101 35.6
AUR62025305 Chenopodium quinoa HOM05D001618 ORTHO05D001486 1.2e-06 57.0 87 37.9
Mapoly0034s0008 Marchantia polymorpha HOM05D000204 ORTHO05D010448 2.1e-06 56.2 110 30.9
SGA_v2.0_scaffold21G09551 Striga asiatica HOM05D001618 ORTHO05D001486 2.8e-06 55.8 87 36.8
VMungo1309G1696 Vigna mungo HOM05D001618 ORTHO05D001486 3.6e-06 55.5 87 37.9


User provided reference genes

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