Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.7e-154 549.3 273 100.0
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 3.0e-119 432.2 297 71.7
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 1.4e-116 423.3 302 70.2
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 1.5e-115 419.9 293 72.4
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 1.5e-115 419.9 303 68.6
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 2.6e-115 419.1 302 69.9
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 3.4e-115 418.7 300 69.7
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 3.4e-115 418.7 289 70.6
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 4.5e-115 418.3 301 68.8
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 1.0e-114 417.2 301 68.4
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 2.2e-114 416.0 294 69.0
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.0e-114 414.8 298 68.8
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 5.0e-114 414.8 294 69.0
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 8.5e-114 414.1 294 69.0
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 8.5e-114 414.1 294 69.0
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.5e-113 411.4 294 68.0
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 3.6e-112 408.7 295 68.8
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 3.6e-112 408.7 296 68.9
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 3.6e-112 408.7 290 70.3
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 6.1e-112 407.9 294 68.0
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 5.1e-111 404.8 298 66.8
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 2.0e-110 402.9 293 66.6
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 3.3e-110 402.1 290 68.3
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 4.4e-110 401.7 293 66.2
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 9.7e-110 400.6 300 66.3
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 9.7e-110 400.6 311 64.6
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 2.2e-109 399.4 294 67.7
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 1.1e-108 397.1 301 66.4
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.8e-108 396.4 329 61.7
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 1.8e-108 396.4 293 65.5
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 5.3e-108 394.8 290 66.2
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 1.5e-107 393.3 290 65.9
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 4.5e-107 391.7 290 66.2
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 5.9e-107 391.3 303 64.7
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 5.9e-107 391.3 302 65.9
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 1.3e-106 390.2 290 65.5
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 2.9e-106 389.0 303 64.4
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 3.8e-106 388.7 289 65.4
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 2.5e-105 386.0 290 65.2
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 2.7e-104 382.5 356 56.2
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 3.6e-104 382.1 293 63.8
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 3.6e-104 382.1 293 63.8
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 6.1e-104 381.3 294 63.3
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 6.1e-104 381.3 293 63.8
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 8.0e-104 380.9 290 64.1
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 1.8e-103 379.8 290 63.8
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.8e-103 379.8 290 64.5
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 1.8e-103 379.8 289 65.7
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 3.0e-103 379.0 290 63.4
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 3.0e-103 379.0 290 63.4
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 3.9e-103 378.6 290 63.4
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 5.2e-103 378.3 290 64.1
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 6.7e-103 377.9 290 64.5
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 8.8e-103 377.5 290 63.4
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 8.8e-103 377.5 300 62.7
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 1.1e-102 377.1 290 63.4
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 2.0e-102 376.3 290 63.4
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 7.4e-102 374.4 293 64.5
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 9.7e-102 374.0 288 63.5
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 1.7e-101 373.2 290 63.1
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 1.7e-101 373.2 293 63.8
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 2.2e-101 372.9 310 61.6
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 3.7e-101 372.1 291 63.6
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 1.4e-100 370.2 234 76.5
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 1.8e-100 369.8 296 60.5
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 2.4e-100 369.4 289 64.4
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 5.3e-100 368.2 294 61.2
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 9.1e-100 367.5 294 61.9
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 9.1e-100 367.5 294 61.9
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 9.1e-100 367.5 294 62.2
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 2.0e-99 366.3 300 60.0
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 2.6e-99 365.9 290 62.1
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 7.7e-99 364.4 290 61.7
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 1.2e-96 357.1 300 60.7
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.7e-96 355.9 242 71.9
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 1.8e-95 353.2 266 65.8
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 2.6e-94 349.4 256 73.8
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 9.7e-94 347.4 233 71.7
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 1.7e-93 346.7 242 69.4
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 2.2e-93 346.3 296 57.1
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 2.8e-93 345.9 293 62.5
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 4.8e-93 345.1 290 59.3
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 7.0e-92 341.3 290 58.3
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 1.6e-91 340.1 294 59.5
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 1.6e-91 340.1 318 56.9
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.0e-91 339.7 300 57.7
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 2.9e-90 335.9 294 56.1
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 1.5e-89 333.6 289 57.1
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 2.1e-88 329.7 303 55.8
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 6.1e-88 328.2 303 58.1
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 6.8e-87 324.7 294 56.8
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 9.1e-84 314.3 290 54.5
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.0e-83 313.2 233 65.7
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 5.9e-83 311.6 246 61.8
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 5.0e-82 308.5 233 63.5
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 9.5e-81 304.3 288 56.6
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 4.1e-76 288.9 225 63.1
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 7.0e-76 288.1 282 56.7
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 1.3e-74 283.9 233 60.1
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.1e-72 276.6 244 59.4
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 2.6e-70 269.6 285 47.7
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 5.4e-68 261.9 298 45.3
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 4.0e-63 245.7 164 71.3
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 1.2e-62 244.2 163 73.0
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 4.9e-61 238.8 296 43.6
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 2.5e-57 226.5 282 39.7
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 8.1e-56 221.5 289 40.5
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 2.5e-49 199.9 144 65.3
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 2.7e-43 179.9 159 60.4
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 3.3e-41 172.9 122 65.6
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 7.3e-41 171.8 204 47.1
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 1.4e-39 167.5 112 71.4
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 3.1e-39 166.4 137 62.0
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 5.3e-39 165.6 121 65.3
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 9.0e-39 164.9 168 51.8
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 7.6e-38 161.8 144 59.7
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 3.9e-34 149.4 143 55.2
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 2.1e-32 143.7 158 49.4
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 6.0e-27 125.6 89 70.8
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 6.7e-26 122.1 181 39.2
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 3.3e-25 119.8 192 33.9
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 4.8e-24 115.9 188 38.8
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 1.4e-23 114.4 86 61.6
MCO12G135 Micromonas commoda HOM05D002058 ORTHO05D003758 2.2e-08 63.9 164 27.4
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 2.8e-08 63.5 200 26.0
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 4.8e-08 62.8 154 33.8
Mapoly0089s0033 Marchantia polymorpha HOM05D002058 ORTHO05D003758 1.8e-07 60.8 167 30.5
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 3.1e-07 60.1 29 82.8
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 3.1e-07 60.1 29 82.8
SEGI_36463 Sequoiadendron giganteum HOM05D002058 ORTHO05D009216 3.4e-06 56.6 125 32.0
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 7.7e-06 55.5 26 84.6


User provided reference genes

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