Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 5.5e-181 637.5 318 100.0
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 5.5e-64 248.8 322 48.4
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 2.2e-60 236.9 329 45.6
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 8.0e-55 218.4 330 44.8
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 1.8e-54 217.2 330 44.8
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 6.3e-52 208.8 342 41.5
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 6.3e-52 208.8 330 42.1
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 3.1e-51 206.5 326 44.2
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 8.5e-49 198.4 328 42.4
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 2.5e-48 196.8 335 43.9
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 4.2e-48 196.1 330 40.3
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 5.5e-48 195.7 323 41.5
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 9.4e-48 194.9 334 42.5
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 1.2e-47 194.5 332 44.3
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 3.6e-47 193.0 351 39.9
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 1.5e-45 187.6 328 40.5
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.0e-45 187.2 335 42.1
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 7.5e-45 185.3 335 41.8
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 1.3e-44 184.5 312 42.6
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 1.7e-44 184.1 324 41.7
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 1.1e-43 181.4 325 40.9
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 4.1e-43 179.5 328 40.2
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 1.2e-42 177.9 331 37.8
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 1.6e-42 177.6 324 41.4
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 2.7e-42 176.8 336 38.7
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 2.7e-42 176.8 316 40.2
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 8.5e-41 171.8 320 40.0
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.1e-40 171.4 326 39.3
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 1.5e-40 171.0 320 39.4
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 4.2e-40 169.5 323 38.1
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 5.5e-40 169.1 327 38.2
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 9.4e-40 168.3 255 44.7
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 9.4e-40 168.3 325 38.2
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 9.4e-40 168.3 322 37.9
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 6.1e-39 165.6 262 42.0
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 6.1e-39 165.6 328 37.2
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 5.2e-38 162.5 326 39.0
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 2.0e-37 160.6 332 37.0
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 9.8e-37 158.3 330 36.7
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 2.8e-36 156.8 252 42.1
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 3.7e-36 156.4 325 36.6
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 6.3e-36 155.6 342 36.5
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 8.3e-36 155.2 345 37.1
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 8.3e-36 155.2 324 39.2
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 1.1e-35 154.8 307 38.1
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.4e-35 154.5 338 35.2
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 1.4e-35 154.5 314 36.3
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 4.1e-35 152.9 319 37.3
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 4.1e-35 152.9 248 42.7
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 4.1e-35 152.9 349 36.1
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 9.1e-35 151.8 327 35.5
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 9.1e-35 151.8 327 35.5
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 5.9e-34 149.1 335 35.2
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.0e-33 148.3 310 36.8
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 1.0e-33 148.3 322 36.3
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 1.7e-33 147.5 325 36.6
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 3.8e-33 146.4 322 37.9
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 3.8e-33 146.4 332 36.7
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 5.5e-32 142.5 305 36.7
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 9.5e-32 141.7 316 35.8
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 1.2e-31 141.4 317 36.6
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 2.8e-31 140.2 316 35.4
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 8.0e-31 138.7 360 32.5
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 4.0e-30 136.3 249 41.0
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 6.8e-30 135.6 311 35.0
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 2.6e-29 133.7 334 33.5
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 9.8e-29 131.7 338 34.0
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 6.3e-28 129.0 354 33.6
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 6.3e-28 129.0 341 31.7
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 1.8e-27 127.5 247 36.4
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 5.4e-27 125.9 254 37.4
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 3.5e-26 123.2 314 34.7
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 3.5e-26 123.2 358 31.6
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 7.8e-26 122.1 305 34.1
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 2.9e-25 120.2 323 35.3
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.5e-24 117.1 315 34.6
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 8.9e-22 108.6 242 36.4
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 2.0e-18 97.4 307 31.3
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 2.7e-18 97.1 311 31.8
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 2.7e-18 97.1 348 29.6
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 4.6e-18 96.3 313 31.9
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 4.6e-18 96.3 313 30.4
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 1.0e-17 95.1 351 32.2
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 4.3e-16 89.7 326 28.5
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 4.3e-16 89.7 199 37.2
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 7.3e-16 89.0 339 27.1
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 2.8e-15 87.0 326 29.4
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 2.0e-13 80.9 255 31.4
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 2.2e-12 77.4 155 35.5
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 6.4e-12 75.9 143 39.9
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 3.2e-11 73.6 192 33.3
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 1.5e-08 64.7 88 43.2
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 1.9e-08 64.3 251 31.1
Aqoxy1G00983 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 1.8e-06 57.8 79 40.5
THA.LOC104798612 Tarenaya hassleriana HOM05D007538 ORTHO05D009464 1.8e-06 57.8 190 30.0


User provided reference genes

Program Settings