Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.5e-228 795.8 402 100.0
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 8.2e-174 614.0 398 72.9
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 2.9e-171 605.5 398 71.6
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 1.9e-170 602.8 398 71.6
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 4.2e-170 601.7 398 71.9
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 5.5e-170 601.3 397 70.5
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 1.4e-168 596.7 398 70.4
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 2.3e-168 595.9 398 71.1
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 4.0e-168 595.1 399 69.9
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.2e-168 594.7 398 72.9
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 1.1e-167 593.6 397 70.0
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 2.6e-167 592.4 398 72.4
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 3.3e-167 592.0 398 69.8
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 9.7e-167 590.5 400 71.5
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.2e-166 589.3 397 69.3
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 2.8e-166 589.0 399 69.9
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 4.8e-166 588.2 400 70.5
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 6.3e-166 587.8 397 71.0
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 8.2e-166 587.4 401 70.1
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.4e-165 586.6 415 67.5
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.3e-165 584.7 398 71.6
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 5.3e-165 584.7 395 71.4
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 1.6e-164 583.2 399 69.4
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 1.6e-164 583.2 400 69.2
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 2.0e-164 582.8 397 69.3
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 3.5e-164 582.0 399 68.7
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 3.5e-164 582.0 398 70.9
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 1.0e-163 580.5 399 70.7
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.3e-163 580.1 366 72.7
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.9e-163 578.9 398 68.8
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 1.1e-162 577.0 398 69.8
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 1.5e-162 576.6 423 67.1
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 3.2e-162 575.5 368 73.4
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 3.2e-162 575.5 397 67.8
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 4.2e-162 575.1 398 68.8
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 4.2e-162 575.1 365 73.7
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 1.2e-161 573.5 406 67.5
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 2.1e-161 572.8 394 70.1
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 3.6e-161 572.0 365 73.2
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 8.8e-160 567.4 399 67.2
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 1.2e-159 567.0 397 67.3
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 1.2e-159 567.0 332 78.0
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 1.2e-159 567.0 400 67.5
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 1.5e-159 566.6 398 66.6
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 4.4e-159 565.1 397 68.5
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 5.7e-159 564.7 399 66.4
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 7.5e-159 564.3 398 66.6
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 9.8e-159 563.9 398 66.8
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 9.8e-159 563.9 402 68.4
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 1.3e-158 563.5 417 66.7
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 1.3e-158 563.5 400 67.0
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 2.8e-158 562.4 371 70.6
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 3.7e-158 562.0 398 65.8
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 3.7e-158 562.0 398 66.8
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 6.3e-158 561.2 365 71.0
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 8.3e-158 560.8 398 66.3
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.1e-157 560.5 397 68.0
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 1.4e-157 560.1 398 65.8
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 1.4e-157 560.1 398 65.8
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 2.4e-157 559.3 402 65.9
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 3.1e-157 558.9 428 63.3
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 2.0e-156 556.2 398 65.6
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 1.0e-155 553.9 398 65.6
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 1.0e-155 553.9 398 65.6
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 1.0e-155 553.9 398 65.6
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 1.0e-155 553.9 364 69.0
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 1.3e-155 553.5 398 65.6
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 1.3e-155 553.5 398 65.6
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 2.9e-155 552.4 445 62.9
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 6.5e-155 551.2 364 69.8
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 8.5e-155 550.8 398 64.8
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 8.5e-155 550.8 369 71.0
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 1.1e-154 550.4 364 70.3
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 1.9e-154 549.7 364 69.8
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 3.2e-154 548.9 398 65.1
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 3.2e-154 548.9 362 69.9
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 1.2e-153 547.0 364 68.4
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 1.6e-153 546.6 363 68.3
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 2.7e-153 545.8 398 64.6
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 2.7e-153 545.8 398 64.6
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 6.1e-153 544.7 397 65.0
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 8.0e-153 544.3 397 64.7
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 8.8e-152 540.8 364 69.0
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 2.6e-151 539.3 364 67.6
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 5.7e-151 538.1 362 68.5
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 5.7e-151 538.1 364 67.3
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 1.3e-150 537.0 360 68.3
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 1.7e-150 536.6 355 69.3
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 3.7e-150 535.4 355 69.3
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 2.4e-149 532.7 364 66.2
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 2.4e-149 532.7 363 66.9
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 7.0e-149 531.2 398 64.6
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 7.0e-149 531.2 520 54.2
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 1.2e-148 530.4 396 63.9
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 2.7e-148 529.3 355 68.7
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 2.7e-148 529.3 380 65.8
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 3.5e-148 528.9 419 61.3
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 7.7e-148 527.7 328 74.1
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 1.0e-147 527.3 351 70.1
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 6.6e-147 524.6 402 65.7
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 1.5e-146 523.5 353 68.8
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.9e-146 523.1 332 72.9
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 4.0e-144 515.4 372 66.4
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 6.8e-144 514.6 359 67.1
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 3.4e-143 512.3 398 64.6
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 2.9e-142 509.2 398 62.8
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 4.6e-140 501.9 368 63.9
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 3.0e-139 499.2 371 64.7
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 5.0e-139 498.4 344 68.3
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 5.0e-139 498.4 344 68.3
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 1.2e-135 487.3 424 59.0
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 1.5e-135 486.9 372 64.2
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 7.0e-133 478.0 330 69.7
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 4.6e-132 475.3 330 69.7
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 7.8e-132 474.6 318 67.9
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.3e-131 473.8 293 74.1
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 6.6e-131 471.5 369 58.3
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 9.5e-130 467.6 396 58.1
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 2.1e-129 466.5 382 58.6
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 4.0e-128 462.2 359 62.1
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 5.2e-128 461.8 315 69.8
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 3.2e-125 452.6 353 60.1
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 4.1e-125 452.2 365 55.9
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 5.4e-125 451.8 249 88.0
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 9.2e-125 451.1 358 63.1
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 1.2e-121 440.7 293 70.3
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 5.4e-117 425.2 382 55.2
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 6.6e-115 418.3 393 52.2
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.5e-114 417.2 244 79.1
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 5.1e-107 392.1 371 52.6
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 5.8e-103 378.6 246 69.9
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 9.9e-103 377.9 217 78.3
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 6.0e-100 368.6 254 68.5
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 1.4e-93 347.4 206 77.7
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 7.4e-82 308.5 368 42.1
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.3e-73 281.2 190 70.5
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 6.9e-64 248.8 297 44.4
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 2.9e-62 243.4 240 51.2
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 1.1e-48 198.4 176 56.2
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 6.3e-41 172.6 85 96.5
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 7.7e-39 165.6 143 68.5
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 1.9e-37 161.0 93 79.6
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 4.1e-24 116.7 77 70.1
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 2.3e-19 100.9 108 49.1
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 6.8e-19 99.4 62 69.4
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 1.5e-18 98.2 95 51.6
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 6.4e-17 92.8 93 48.4
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.0e-14 84.0 55 70.9
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.0e-14 84.0 55 70.9
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.0e-14 84.0 55 70.9
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.9e-14 83.6 55 70.9
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 1.9e-13 81.3 54 66.7
COL.COLO4_16939 Corchorus olitorius HOM05D004519 ORTHO05D006283 2.5e-13 80.9 82 58.5
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 3.3e-13 80.5 54 68.5
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 1.1e-08 65.5 48 62.5
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 1.4e-08 65.1 60 55.0
Gohir.D02G161780 Gossypium hirsutum HOM05D004519 ORTHO05D017048 5.1e-06 56.6 35 74.3
Gohir.D10G176966 Gossypium hirsutum HOM05D004519 ORTHO05D017048 5.1e-06 56.6 35 74.3


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