Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 7.9e-199 696.8 331 100.0
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 6.8e-166 587.4 331 81.9
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 2.0e-165 585.9 332 80.1
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 9.8e-165 583.6 329 81.5
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 6.4e-164 580.9 334 81.4
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 3.2e-163 578.6 331 80.7
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 1.7e-161 572.8 329 80.5
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 8.6e-161 570.5 332 80.1
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 1.9e-160 569.3 331 79.2
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 1.9e-160 569.3 331 78.2
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.9e-160 569.3 331 78.2
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.9e-160 569.3 331 78.2
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 3.3e-160 568.5 334 79.3
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 3.3e-160 568.5 333 79.0
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 5.6e-160 567.8 333 79.0
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.1e-159 565.8 331 77.9
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 4.7e-159 564.7 332 79.2
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 6.2e-159 564.3 331 77.6
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 1.8e-158 562.8 329 79.9
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.3e-158 562.4 331 77.6
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 5.2e-158 561.2 330 78.5
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 2.6e-157 558.9 327 79.5
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 4.4e-157 558.1 331 77.3
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 5.8e-157 557.8 333 78.1
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 9.8e-157 557.0 329 77.5
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 1.7e-156 556.2 298 84.9
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 2.2e-156 555.8 333 78.7
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 3.7e-156 555.1 331 77.0
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 8.3e-156 553.9 330 78.5
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 1.1e-155 553.5 335 77.6
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 1.4e-155 553.1 324 80.2
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 1.9e-155 552.7 301 84.7
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 3.2e-155 552.0 313 81.8
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 3.2e-155 552.0 331 76.4
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 4.1e-155 551.6 299 84.3
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.2e-154 550.1 335 76.1
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 2.7e-154 548.9 327 78.0
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 6.0e-154 547.7 295 85.1
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 5.0e-153 544.7 295 83.7
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 1.5e-152 543.1 335 76.1
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 2.5e-152 542.3 298 82.6
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 3.3e-152 542.0 333 76.0
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 5.6e-152 541.2 327 77.1
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 1.6e-151 539.7 327 77.1
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.6e-151 539.7 324 76.5
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 2.1e-151 539.3 334 75.4
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 2.8e-151 538.9 334 75.4
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 6.2e-151 537.7 299 82.3
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 6.2e-151 537.7 300 81.0
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 1.4e-150 536.6 334 75.1
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 3.1e-150 535.4 330 76.1
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 8.9e-150 533.9 306 81.0
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 2.6e-149 532.3 312 78.8
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 5.8e-149 531.2 332 75.0
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 9.8e-149 530.4 326 76.4
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 1.3e-148 530.0 319 77.1
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 2.2e-148 529.3 332 74.7
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 2.2e-148 529.3 345 72.8
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 6.4e-148 527.7 330 74.2
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 1.4e-147 526.6 298 81.2
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 1.9e-147 526.2 327 74.6
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 4.1e-147 525.0 319 76.8
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 2.7e-146 522.3 371 69.5
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 3.5e-146 521.9 298 79.5
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 6.0e-146 521.2 323 74.0
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 1.3e-145 520.0 319 76.2
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 1.7e-145 519.6 319 76.5
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 3.9e-145 518.5 318 77.0
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.9e-144 516.2 302 77.5
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 6.2e-143 511.1 295 78.6
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 1.8e-142 509.6 301 76.1
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 4.0e-142 508.4 317 76.0
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 5.2e-142 508.1 328 73.8
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 6.8e-142 507.7 327 74.0
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 1.7e-140 503.1 333 73.0
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 8.4e-140 500.7 334 72.5
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 8.4e-140 500.7 334 72.5
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 1.4e-139 500.0 282 83.7
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 1.9e-139 499.6 333 72.4
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 1.2e-135 486.9 288 77.8
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 1.5e-133 479.9 278 78.8
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 4.0e-126 455.3 293 73.4
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 5.3e-126 454.9 275 74.5
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 6.9e-126 454.5 241 84.2
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 1.5e-125 453.4 259 80.3
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 1.5e-125 453.4 333 69.4
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 5.4e-123 444.9 241 83.4
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 1.3e-121 440.3 302 67.2
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 3.3e-120 435.6 241 82.6
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 5.6e-120 434.9 318 63.8
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 1.6e-119 433.3 292 71.9
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 8.1e-119 431.0 296 65.9
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 9.0e-118 427.6 261 76.2
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 2.6e-117 426.0 251 77.7
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 3.4e-117 425.6 291 67.0
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 6.4e-116 421.4 250 74.4
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 4.3e-112 408.7 300 63.3
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 1.9e-99 366.7 204 80.9
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 1.4e-94 350.5 208 76.4
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 3.4e-93 345.9 182 84.1
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 2.2e-92 343.2 259 64.9
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 3.9e-89 332.4 256 64.8
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 9.7e-72 274.6 170 74.7
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 2.2e-71 273.5 297 49.8
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 2.9e-68 263.1 297 47.8
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 6.1e-66 255.4 173 73.4
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 1.0e-65 254.6 199 63.8
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.3e-65 253.4 200 62.5
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 2.9e-60 236.5 136 80.9
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 6.8e-57 225.3 312 42.0
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 7.7e-53 211.8 284 43.3
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 9.5e-51 204.9 183 60.1
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.2e-47 193.7 131 68.7
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 6.6e-44 182.2 158 60.8
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 7.3e-43 178.7 277 37.2
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 6.0e-37 159.1 279 36.6
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.2e-29 134.8 323 32.2
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 8.6e-28 128.6 157 43.3
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.1e-27 128.3 85 70.6
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 4.1e-22 109.8 91 60.4
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 5.8e-16 89.4 57 71.9
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.9e-11 74.3 51 62.7
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 1.6e-10 71.2 42 76.2
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 1.8e-09 67.8 41 68.3
MBI11_g05318_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.3e-06 55.5 30 83.3
Peaxi162Scf00786g00028 Petunia axillaris HOM05D014441 ORTHO05D016353 9.3e-06 55.5 31 71.0


User provided reference genes

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