Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00177 Eucalyptus grandis HOM05D006991 ORTHO05D009188 0.0e+00 1355.9 662 100.0
GSVIVG01026850001 Vitis vinifera HOM05D006991 ORTHO05D009188 1.1e-263 913.3 672 66.8
PGR042G0621 Punica granatum HOM05D006991 ORTHO05D009188 6.1e-259 897.5 674 65.7
Ciclev10019238m.g Citrus clementina HOM05D006991 ORTHO05D009188 2.6e-257 892.1 673 66.4
QL08p049512 Quercus lobata HOM05D006991 ORTHO05D009188 4.4e-257 891.3 675 66.4
Dinv43786 Davidia involucrata HOM05D006991 ORTHO05D009188 7.5e-257 890.6 671 66.9
TWI23G0867 Tripterygium wilfordii HOM05D006991 ORTHO05D009188 1.7e-256 889.4 666 67.0
Potri.002G157400 Populus trichocarpa HOM05D006991 ORTHO05D009188 2.4e-255 885.6 668 66.2
RcHm_v2.0_Chr1g0354041 Rosa chinensis HOM05D006991 ORTHO05D009188 5.4e-255 884.4 665 66.9
Prupe.2G164100 Prunus persica HOM05D006991 ORTHO05D009188 7.0e-255 884.0 674 66.3
FvH4_7g13830 Fragaria vesca HOM05D006991 ORTHO05D009188 2.7e-254 882.1 664 66.6
Haze_15467 Corylus avellana HOM05D006991 ORTHO05D009188 5.9e-254 880.9 671 66.9
FAN03G2057 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.3e-253 879.8 674 65.4
Nn6g33525 Nelumbo nucifera HOM05D006991 ORTHO05D009188 1.3e-253 879.8 664 64.9
MD01G1054400 Malus domestica HOM05D006991 ORTHO05D009188 1.9e-252 875.9 660 66.2
CANSAT56G3382 Cannabis sativa HOM05D006991 ORTHO05D009188 3.6e-251 871.7 673 65.4
Lj3g0006815 Lotus japonicus HOM05D006991 ORTHO05D009188 6.1e-251 870.9 674 65.0
FAN10G0464 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.6e-249 865.5 691 63.8
TPR.G4402 Trifolium pratense HOM05D006991 ORTHO05D009188 7.5e-249 864.0 672 64.6
FAN06G2381 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.7e-248 862.8 702 62.8
Glyma.07G073500 Glycine max HOM05D006991 ORTHO05D009188 2.2e-248 862.4 672 64.7
CSS0011179 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 4.1e-247 858.2 657 64.7
HanXRQChr04g0121651 Helianthus annuus HOM05D006991 ORTHO05D009188 2.7e-246 855.5 665 64.8
Medtr8g031480 Medicago truncatula HOM05D006991 ORTHO05D009188 2.7e-246 855.5 671 63.9
Lalb_Chr04g0256761 Lupinus albus HOM05D006991 ORTHO05D009188 4.6e-246 854.7 675 63.7
Cfa003952 Carpinus fangiana HOM05D006991 ORTHO05D009188 6.0e-246 854.4 671 65.3
Thecc.01G363100 Theobroma cacao HOM05D006991 ORTHO05D009188 6.6e-245 850.9 671 62.9
FAN06G3007 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.9e-244 849.4 684 63.6
FAN01G0340 Fragaria x ananassa HOM05D006991 ORTHO05D009188 4.3e-244 848.2 684 63.6
Duzib138G0243 Durio zibethinus HOM05D006991 ORTHO05D009188 9.5e-244 847.0 677 62.6
AUR62004323 Chenopodium quinoa HOM05D006991 ORTHO05D009188 1.8e-242 842.8 674 62.6
Sed0028010 Sechium edule HOM05D006991 ORTHO05D009188 4.0e-242 841.6 666 64.3
COL.COLO4_12678 Corchorus olitorius HOM05D006991 ORTHO05D009188 6.8e-242 840.9 678 61.7
ClCG05G001680 Citrullus lanatus HOM05D006991 ORTHO05D009188 2.6e-241 839.0 665 64.7
Atru.chr5.484 Acer truncatum HOM05D006991 ORTHO05D009188 4.4e-241 838.2 631 65.6
Lsat_1_v5_gn_7_5201 Lactuca sativa HOM05D006991 ORTHO05D009188 1.3e-240 836.6 667 63.3
DCAR_015941 Daucus carota HOM05D006991 ORTHO05D009188 2.2e-240 835.9 664 62.3
MELO3C006127.2 Cucumis melo HOM05D006991 ORTHO05D009188 4.1e-239 831.6 665 63.6
THA.LOC104801448 Tarenaya hassleriana HOM05D006991 ORTHO05D009188 5.4e-239 831.2 672 61.8
VMungo0331G1855 Vigna mungo HOM05D006991 ORTHO05D009188 7.0e-239 830.9 656 63.7
Ah.05g176510 Amaranthus hybridus HOM05D006991 ORTHO05D009188 1.6e-238 829.7 668 62.3
Rhsim07G0017800 Rhododendron simsii HOM05D006991 ORTHO05D009188 1.6e-238 829.7 657 63.9
Cc02_g37710 Coffea canephora HOM05D006991 ORTHO05D009188 2.7e-238 828.9 662 62.7
CsaV3_3G009060 Cucumis sativus L. HOM05D006991 ORTHO05D009188 1.1e-236 823.5 656 64.0
BraA09t42261Z Brassica rapa HOM05D006991 ORTHO05D009188 1.5e-236 823.2 657 63.0
AT1G01770 Arabidopsis thaliana HOM05D006991 ORTHO05D009188 1.9e-236 822.8 670 63.1
Gohir.D07G148700 Gossypium hirsutum HOM05D006991 ORTHO05D009188 2.5e-236 822.4 672 62.1
Lj9A581T68 Lonicera japonica HOM05D006991 ORTHO05D009188 4.3e-236 821.6 665 61.5
Sp1g00530 Schrenkiella parvula HOM05D006991 ORTHO05D009188 7.3e-236 820.8 666 62.9
ATR0680G083 Amborella trichopoda HOM05D006991 ORTHO05D009188 9.5e-236 820.5 678 60.6
Gorai.001G170100 Gossypium raimondii HOM05D006991 ORTHO05D009188 9.5e-236 820.5 672 61.8
AL1G10570 Arabidopsis lyrata HOM05D006991 ORTHO05D009188 1.2e-235 820.1 671 62.6
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 2.8e-235 818.9 664 63.0
BolC8t52898H Brassica oleracea HOM05D006991 ORTHO05D009188 6.2e-235 817.8 667 62.7
Carub.0001s0044 Capsella rubella HOM05D006991 ORTHO05D009188 1.8e-234 816.2 662 62.5
CSS0000914 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 3.1e-234 815.5 651 62.4
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala HOM05D006991 ORTHO05D009188 6.8e-234 814.3 672 62.5
Thhalv10007047m.g Eutrema salsugineum HOM05D006991 ORTHO05D009188 6.8e-234 814.3 669 62.3
MSTRG.28216 Avicennia marina HOM05D006991 ORTHO05D009188 8.9e-234 813.9 665 61.1
ECA236G3544 Erigeron canadensis HOM05D006991 ORTHO05D009188 3.4e-233 812.0 662 62.4
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 4.4e-233 811.6 664 62.2
CDE05G1529 Ceratophyllum demersum HOM05D006991 ORTHO05D009188 1.7e-232 809.7 657 60.4
Nitab4.5_0009210g0040 Nicotiana tabacum HOM05D006991 ORTHO05D009188 6.4e-232 807.7 657 61.5
Nitab4.5_0002160g0070 Nicotiana tabacum HOM05D006991 ORTHO05D009188 8.3e-232 807.4 657 61.6
Hund27298 Selenicereus undatus HOM05D006991 ORTHO05D002850 3.2e-231 805.4 666 61.3
PGSC0003DMG400000156 Solanum tuberosum HOM05D006991 ORTHO05D009188 2.1e-230 802.7 657 61.2
PSO063G6634 Papaver somniferum HOM05D006991 ORTHO05D009188 2.7e-230 802.4 666 61.3
Cpa.g.sc18.226 Carica papaya HOM05D006991 ORTHO05D009188 3.5e-230 802.0 688 60.8
Sopen01g038120 Solanum pennellii HOM05D006991 ORTHO05D009188 4.6e-230 801.6 663 61.4
Aa31LG1G11140 Aethionema arabicum HOM05D006991 ORTHO05D009188 6.0e-230 801.2 676 61.1
Migut.N01431 Erythranthe guttata HOM05D006991 ORTHO05D009188 1.3e-229 800.0 662 61.3
vmacro13305 Vaccinium macrocarpon HOM05D006991 ORTHO05D009188 8.6e-229 797.3 721 57.3
CAN.G78.50 Capsicum annuum HOM05D006991 ORTHO05D009188 1.5e-228 796.6 656 60.4
Sc26g0001000 Simmondsia chinensis HOM05D006991 ORTHO05D009188 3.3e-228 795.4 664 61.4
SalBow5G3488 Salvia bowleyana HOM05D006991 ORTHO05D009188 4.3e-228 795.0 656 60.7
SalBow5G3803 Salvia bowleyana HOM05D006991 ORTHO05D009188 4.3e-228 795.0 656 60.7
Gohir.A07G142900 Gossypium hirsutum HOM05D006991 ORTHO05D009188 2.4e-226 789.3 674 60.1
Peaxi162Scf00020g00011 Petunia axillaris HOM05D006991 ORTHO05D009188 1.7e-224 783.1 676 59.0
Solyc01g094330.3 Solanum lycopersicum HOM05D006991 ORTHO05D009188 3.8e-224 781.9 689 58.3
Os07g0457300 Oryza sativa ssp. japonica HOM05D006991 ORTHO05D009188 1.3e-221 773.5 671 59.6
Zm00001eb306550 Zea mays HOM05D006991 ORTHO05D009188 5.6e-220 768.1 669 58.9
SGA_v2.0_scaffold43G16441 Striga asiatica HOM05D006991 ORTHO05D009188 2.8e-219 765.8 668 58.2
Psat4g154080 Pisum sativum HOM05D006991 ORTHO05D009188 5.3e-218 761.5 616 63.0
HPP92_004979 Vanilla planifolia HOM05D006991 ORTHO05D009188 1.9e-215 753.1 655 58.6
EL10Ac1g00536 Beta vulgaris HOM05D006991 ORTHO05D009188 3.4e-209 732.3 654 58.3
Hma1.2p1_0001F.1_g001600 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 4.8e-203 711.8 519 67.2
unitig_748.g7107 Utricularia gibba HOM05D006991 ORTHO05D009188 3.9e-197 692.2 615 58.4
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea HOM05D006991 ORTHO05D009188 1.5e-193 680.2 671 55.7
CiPaw.02G028700 Carya illinoinensis HOM05D006991 ORTHO05D009188 7.6e-193 677.9 458 71.8
Actinidia10005 Actinidia chinensis HOM05D006991 ORTHO05D009188 2.5e-188 662.9 571 58.5
SMO164G0214 Selaginella moellendorffii HOM05D006991 ORTHO05D009188 2.8e-179 632.9 641 52.0
Pp3c9_2540 Physcomitrium patens HOM05D006991 ORTHO05D009188 4.1e-178 629.0 644 51.1
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea HOM05D006991 ORTHO05D009188 6.3e-171 605.1 658 51.1
MBI18_g09765_MAGBIO Magnolia biondii HOM05D006991 ORTHO05D009188 6.3e-163 578.6 528 55.1
Ca_23659_v3 Cicer arietinum L. HOM05D006991 ORTHO05D009188 4.2e-159 565.8 621 51.2
Phvul.010G096000 Phaseolus vulgaris HOM05D006991 ORTHO05D009188 7.0e-154 548.5 362 72.9
CARHR000550 Cardamine hirsuta HOM05D006991 ORTHO05D009188 2.9e-152 543.1 429 63.4
Manes.01G259800 Manihot esculenta HOM05D006991 ORTHO05D009188 1.4e-133 481.1 327 71.3
TAR375G0043 Trochodendron aralioides HOM05D006991 ORTHO05D009188 6.8e-133 478.8 335 69.3
AagrBONN_evm.TU.Sc2ySwM_344.4948 Anthoceros agrestis HOM05D006991 ORTHO05D009188 7.8e-129 465.3 502 48.6
RcHm_v2.0_Chr1g0354021 Rosa chinensis HOM05D006991 ORTHO05D009188 3.8e-107 393.3 408 53.7
EL10Ac1g02136 Beta vulgaris HOM05D006991 ORTHO05D009188 1.8e-77 294.7 269 55.4
EL10Ac3g06779 Beta vulgaris HOM05D006991 ORTHO05D009188 2.6e-68 264.2 189 61.4
Sabra02G0125100 Salix brachista HOM05D006991 ORTHO05D009188 1.1e-66 258.8 192 70.3
HanXRQChr01g0021681 Helianthus annuus HOM05D006991 ORTHO05D009188 1.9e-66 258.1 194 66.5
Ca_23662_v3 Cicer arietinum L. HOM05D006991 ORTHO05D028457 5.5e-50 203.4 158 63.3
QL09p021383 Quercus lobata HOM05D006991 ORTHO05D009188 2.3e-48 198.0 163 63.2
EL10Ac5g11247 Beta vulgaris HOM05D006991 ORTHO05D009188 4.0e-48 197.2 191 52.4
AUR62033321 Chenopodium quinoa HOM05D006991 ORTHO05D028457 1.5e-47 195.3 137 67.2
AUR62003727 Chenopodium quinoa HOM05D001417 ORTHO05D001496 2.2e-46 191.4 126 73.8
PSO782G3099 Papaver somniferum HOM05D006991 ORTHO05D028457 5.9e-36 156.8 169 47.9
HanXRQChr01g0025441 Helianthus annuus HOM05D006991 ORTHO05D009188 5.2e-32 143.7 73 89.0
HanXRQChr03g0092981 Helianthus annuus HOM05D006991 ORTHO05D226355 2.2e-30 138.3 104 64.4
CAN.G1527.6 Capsicum annuum HOM05D006991 ORTHO05D028457 4.1e-29 134.0 114 58.8
CAN.G226.8 Capsicum annuum HOM05D006991 ORTHO05D000001 5.9e-20 103.6 66 72.7
AUR62036784 Chenopodium quinoa HOM05D006991 ORTHO05D138340 6.6e-19 100.1 81 56.8


User provided reference genes

Program Settings