Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00158 Eucalyptus grandis HOM05D005367 ORTHO05D006328 1.4e-88 329.7 188 100.0
Duzib133G0249 Durio zibethinus HOM05D005367 ORTHO05D006328 8.3e-36 154.5 145 59.3
GSVIVG01026893001 Vitis vinifera HOM05D005367 ORTHO05D006328 1.2e-34 150.6 152 53.9
CSS0033809 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 1.7e-33 146.7 162 51.2
CSS0040093 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 1.7e-33 146.7 155 52.9
Potri.014G082600 Populus trichocarpa HOM05D005367 ORTHO05D006328 2.3e-33 146.4 159 50.9
Dinv43805 Davidia involucrata HOM05D005367 ORTHO05D006328 1.1e-32 144.1 170 47.1
COL.COLO4_12698 Corchorus olitorius HOM05D005367 ORTHO05D006328 1.6e-31 140.2 172 48.3
Gohir.A11G088100 Gossypium hirsutum HOM05D005367 ORTHO05D006328 3.6e-31 139.0 174 46.6
CiPaw.02G029900 Carya illinoinensis HOM05D005367 ORTHO05D006328 4.7e-31 138.7 178 42.7
Gohir.D11G092400 Gossypium hirsutum HOM05D005367 ORTHO05D006328 4.7e-31 138.7 210 45.2
Gorai.007G098700 Gossypium raimondii HOM05D005367 ORTHO05D006328 4.7e-31 138.7 210 45.2
Hma1.2p1_0001F.1_g001380 Hydrangea macrophylla HOM05D005367 ORTHO05D006328 4.7e-31 138.7 168 47.0
Atru.chr5.466 Acer truncatum HOM05D005367 ORTHO05D006328 6.2e-31 138.3 151 49.0
PGR042G0868 Punica granatum HOM05D005367 ORTHO05D006328 6.2e-31 138.3 144 54.9
Migut.B01742 Erythranthe guttata HOM05D005367 ORTHO05D006328 1.4e-30 137.1 156 49.4
RcHm_v2.0_Chr1g0355051 Rosa chinensis HOM05D005367 ORTHO05D006328 1.8e-30 136.7 149 48.3
Ciclev10021865m.g Citrus clementina HOM05D005367 ORTHO05D006328 2.4e-30 136.3 164 47.0
Thecc.01G360700 Theobroma cacao HOM05D005367 ORTHO05D006328 2.4e-30 136.3 206 51.5
Cpa.g.sc18.245 Carica papaya HOM05D005367 ORTHO05D006328 5.2e-30 135.2 175 46.3
Haze_15487 Corylus avellana HOM05D005367 ORTHO05D006328 8.9e-30 134.4 176 42.6
Prupe.2G167900 Prunus persica HOM05D005367 ORTHO05D006328 8.9e-30 134.4 153 48.4
SalBow3G2019 Salvia bowleyana HOM05D005367 ORTHO05D006328 1.2e-29 134.0 147 48.3
PGR031G3282 Punica granatum HOM05D005367 ORTHO05D006328 2.0e-29 133.3 166 46.4
Gohir.D08G152300 Gossypium hirsutum HOM05D005367 ORTHO05D006328 2.6e-29 132.9 173 47.4
Cc02_g37850 Coffea canephora HOM05D005367 ORTHO05D006328 4.4e-29 132.1 166 45.2
MD07G1139200 Malus domestica HOM05D005367 ORTHO05D006328 5.8e-29 131.7 150 50.0
Potri.002G158500 Populus trichocarpa HOM05D005367 ORTHO05D006328 5.8e-29 131.7 159 48.4
Actinidia20916 Actinidia chinensis HOM05D005367 ORTHO05D006328 7.6e-29 131.3 155 49.7
Lalb_Chr24g0401631 Lupinus albus HOM05D005367 ORTHO05D006328 1.3e-28 130.6 152 46.7
Gorai.004G158200 Gossypium raimondii HOM05D005367 ORTHO05D006328 1.7e-28 130.2 173 46.8
QL08p049031 Quercus lobata HOM05D005367 ORTHO05D006328 1.7e-28 130.2 159 45.9
TWI14G0016 Tripterygium wilfordii HOM05D005367 ORTHO05D006328 2.2e-28 129.8 165 44.8
CANSAT56G3377 Cannabis sativa HOM05D005367 ORTHO05D006328 2.9e-28 129.4 141 50.4
Cfa003939 Carpinus fangiana HOM05D005367 ORTHO05D006328 2.9e-28 129.4 180 42.8
Gohir.A08G130800 Gossypium hirsutum HOM05D005367 ORTHO05D006328 2.9e-28 129.4 169 46.7
Lalb_Chr01g0011531 Lupinus albus HOM05D005367 ORTHO05D006328 3.8e-28 129.0 152 46.1
RcHm_v2.0_Chr1g0354801 Rosa chinensis HOM05D005367 ORTHO05D006328 6.4e-28 128.3 149 47.0
FAN06G0563 Fragaria x ananassa HOM05D005367 ORTHO05D006328 8.4e-28 127.9 152 47.4
Lj9A582T87 Lonicera japonica HOM05D005367 ORTHO05D006328 1.1e-27 127.5 160 42.5
vmacro13291 Vaccinium macrocarpon HOM05D005367 ORTHO05D006328 1.1e-27 127.5 153 49.0
ClCG06G003800 Citrullus lanatus HOM05D005367 ORTHO05D006328 1.9e-27 126.7 197 40.6
FAN10G0042 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.9e-27 126.7 152 46.7
Ca_07909_v3 Cicer arietinum L. HOM05D005367 ORTHO05D006328 2.4e-27 126.3 140 45.0
FvH4_7g14150 Fragaria vesca HOM05D005367 ORTHO05D006328 2.4e-27 126.3 152 46.7
Oeu056369.1 Olea europaea HOM05D005367 ORTHO05D006328 2.4e-27 126.3 152 46.7
SGA_v2.0_scaffold11G05663 Striga asiatica HOM05D000368 ORTHO05D006328 3.2e-27 125.9 145 49.0
Nn1g01501 Nelumbo nucifera HOM05D005367 ORTHO05D006328 4.1e-27 125.6 174 40.8
MD01G1057500 Malus domestica HOM05D005367 ORTHO05D006328 7.1e-27 124.8 150 49.3
MSTRG.20826 Avicennia marina HOM05D005367 ORTHO05D006328 9.2e-27 124.4 157 43.3
FAN01G2456 Fragaria x ananassa HOM05D005367 ORTHO05D006328 9.2e-27 124.4 152 46.1
Manes.05G036200 Manihot esculenta HOM05D005367 ORTHO05D006328 9.2e-27 124.4 166 44.6
Eucgr.D02282 Eucalyptus grandis HOM05D005367 ORTHO05D006328 1.6e-26 123.6 159 44.0
Glyma.18G231900 Glycine max HOM05D005367 ORTHO05D006328 1.6e-26 123.6 173 39.3
TWI59G0064 Tripterygium wilfordii HOM05D005367 ORTHO05D006328 1.6e-26 123.6 171 42.7
FAN03G1221 Fragaria x ananassa HOM05D005367 ORTHO05D006328 2.1e-26 123.2 152 46.1
TAR636G2389 Trochodendron aralioides HOM05D003133 ORTHO05D003642 2.1e-26 123.2 178 39.9
TAR375G0799 Trochodendron aralioides HOM05D005367 ORTHO05D006328 3.5e-26 122.5 170 44.7
Sed0017642 Sechium edule HOM05D005367 ORTHO05D006328 7.8e-26 121.3 151 45.7
THA.LOC104801446 Tarenaya hassleriana HOM05D005367 ORTHO05D006328 7.8e-26 121.3 158 43.0
arahy.Tifrunner.gnm1.ann1.G5US7K Arachis hypogaea HOM05D005367 ORTHO05D006328 1.3e-25 120.6 159 40.3
Sp1g00570 Schrenkiella parvula HOM05D005367 ORTHO05D006328 1.3e-25 120.6 161 44.1
EL10Ac1g00429 Beta vulgaris HOM05D005367 ORTHO05D006328 1.7e-25 120.2 155 45.2
arahy.Tifrunner.gnm1.ann1.D8DQXR Arachis hypogaea HOM05D005367 ORTHO05D006328 2.3e-25 119.8 159 39.6
Nitab4.5_0001702g0150 Nicotiana tabacum HOM05D005367 ORTHO05D006328 2.3e-25 119.8 165 40.6
Solyc05g049880.3 Solanum lycopersicum HOM05D005367 ORTHO05D006328 2.3e-25 119.8 167 43.1
Sopen05g028210 Solanum pennellii HOM05D005367 ORTHO05D006328 2.3e-25 119.8 167 43.1
Ah.05g180710 Amaranthus hybridus HOM05D005367 ORTHO05D006328 3.0e-25 119.4 142 45.1
MELO3C021217.2 Cucumis melo HOM05D005367 ORTHO05D006328 5.1e-25 118.6 155 43.2
Lj1g0004821 Lotus japonicus HOM05D005367 ORTHO05D006328 6.6e-25 118.2 191 37.2
Manes.01G258500 Manihot esculenta HOM05D005367 ORTHO05D006328 8.6e-25 117.9 156 41.0
Medtr7g077380 Medicago truncatula HOM05D005367 ORTHO05D006328 1.9e-24 116.7 140 42.1
Nn6g33454 Nelumbo nucifera HOM05D005367 ORTHO05D006328 2.5e-24 116.3 170 40.0
Hund16930 Selenicereus undatus HOM05D005367 ORTHO05D006328 4.3e-24 115.5 163 42.9
Psat3g109400 Pisum sativum HOM05D005367 ORTHO05D006328 5.6e-24 115.2 141 41.1
HanXRQChr16g0522831 Helianthus annuus HOM05D005367 ORTHO05D006328 7.3e-24 114.8 160 41.9
Nitab4.5_0008050g0010 Nicotiana tabacum HOM05D005367 ORTHO05D006328 7.3e-24 114.8 165 41.8
CsaV3_6G000470 Cucumis sativus L. HOM05D005367 ORTHO05D006328 1.2e-23 114.0 156 42.9
RcHm_v2.0_Chr1g0377581 Rosa chinensis HOM05D005367 ORTHO05D006328 1.2e-23 114.0 167 40.7
Sc01g0003360 Simmondsia chinensis HOM05D005367 ORTHO05D006328 1.2e-23 114.0 170 41.8
AT1G01730 Arabidopsis thaliana HOM05D005367 ORTHO05D006328 1.6e-23 113.6 152 42.1
Carub.0001s0048 Capsella rubella HOM05D005367 ORTHO05D006328 2.1e-23 113.2 164 41.5
Lsat_1_v5_gn_4_36280 Lactuca sativa HOM05D005367 ORTHO05D006328 3.6e-23 112.5 168 40.5
Peaxi162Scf00191g01425 Petunia axillaris HOM05D005367 ORTHO05D006328 3.6e-23 112.5 156 42.3
AL1G10610 Arabidopsis lyrata HOM05D005367 ORTHO05D006328 4.7e-23 112.1 151 43.7
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 4.7e-23 112.1 144 42.4
BolC8t52897H Brassica oleracea HOM05D000368 ORTHO05D000289 4.7e-23 112.1 144 42.4
unitig_61.g26388 Utricularia gibba HOM05D005367 ORTHO05D006328 4.7e-23 112.1 134 45.5
Manes.06G148200 Manihot esculenta HOM05D005367 ORTHO05D006328 6.2e-23 111.7 167 39.5
Ciclev10006075m.g Citrus clementina HOM05D005367 ORTHO05D006328 1.1e-22 110.9 147 42.9
Duzib205G1257 Durio zibethinus HOM05D005367 ORTHO05D006328 1.4e-22 110.5 171 41.5
PGSC0003DMG400021656 Solanum tuberosum HOM05D005367 ORTHO05D006328 1.4e-22 110.5 167 40.1
Thhalv10008538m.g Eutrema salsugineum HOM05D005367 ORTHO05D006328 1.8e-22 110.2 186 37.1
BraA09t42260Z Brassica rapa HOM05D005367 ORTHO05D006328 3.1e-22 109.4 144 41.0
TPR.G37815 Trifolium pratense HOM05D005367 ORTHO05D006328 6.9e-22 108.2 139 39.6
VMungo1383G2823 Vigna mungo HOM05D005367 ORTHO05D006328 2.6e-21 106.3 147 41.5
Atru.chr1.441 Acer truncatum HOM05D005367 ORTHO05D006328 5.8e-21 105.1 164 42.1
AUR62004342 Chenopodium quinoa HOM05D005367 ORTHO05D006328 5.8e-21 105.1 138 44.2
FvH4_7g29600 Fragaria vesca HOM05D005367 ORTHO05D006328 9.9e-21 104.4 167 37.7
MD01G1202200 Malus domestica HOM05D005367 ORTHO05D006328 9.9e-21 104.4 164 38.4
FAN10G3657 Fragaria x ananassa HOM05D005367 ORTHO05D006328 2.2e-20 103.2 158 39.2
Atru.chr1.440 Acer truncatum HOM05D005367 ORTHO05D006328 6.4e-20 101.7 143 41.3
PSO478G0766 Papaver somniferum HOM05D005367 ORTHO05D006328 1.1e-19 100.9 181 37.6
VMungo1383G2792 Vigna mungo HOM05D005367 ORTHO05D006328 2.4e-19 99.8 146 39.7
FAN10G4254 Fragaria x ananassa HOM05D005367 ORTHO05D006328 3.2e-19 99.4 167 36.5
PSO782G1827 Papaver somniferum HOM05D005367 ORTHO05D006328 4.2e-19 99.0 169 38.5
ECA234G3275 Erigeron canadensis HOM05D005367 ORTHO05D006328 5.4e-19 98.6 173 36.4
Phvul.008G065800 Phaseolus vulgaris HOM05D005367 ORTHO05D006328 1.6e-18 97.1 147 38.1
QL09p013904 Quercus lobata HOM05D005367 ORTHO05D006328 2.1e-18 96.7 164 36.6
DCAR_010300 Daucus carota HOM05D005367 ORTHO05D006328 2.7e-18 96.3 163 38.0
Aqoxy7G00339 Aquilegia oxysepala HOM05D005367 ORTHO05D006328 6.0e-18 95.1 162 35.8
COL.COLO4_14330 Corchorus olitorius HOM05D005367 ORTHO05D006328 6.0e-18 95.1 161 36.0
vmacro06668 Vaccinium macrocarpon HOM05D005367 ORTHO05D006328 3.0e-17 92.8 167 34.7
Potri.015G145000 Populus trichocarpa HOM05D005367 ORTHO05D006328 3.9e-17 92.4 132 37.9
Sabra14G0059900 Salix brachista HOM05D005367 ORTHO05D006328 3.9e-17 92.4 210 34.8
HPP92_022052 Vanilla planifolia HOM05D005367 ORTHO05D006328 1.6e-15 87.0 145 34.5
HPP92_027620 Vanilla planifolia HOM05D005367 ORTHO05D006328 1.6e-15 87.0 145 34.5
Actinidia34119 Actinidia chinensis HOM05D005367 ORTHO05D006328 4.0e-14 82.4 140 38.6
FAN03G1577 Fragaria x ananassa HOM05D005367 ORTHO05D006328 9.9e-13 77.8 138 34.1
FAN10G0871 Fragaria x ananassa HOM05D005367 ORTHO05D006328 9.9e-13 77.8 89 47.2
FAN10G3879 Fragaria x ananassa HOM05D005367 ORTHO05D006328 3.8e-12 75.9 89 46.1
FAN28G3009 Fragaria x ananassa HOM05D005367 ORTHO05D006328 4.9e-12 75.5 83 48.2
FAN10G1555 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.4e-11 73.9 101 44.6
FAN10G2377 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.4e-11 73.9 70 51.4
Rhsim03G0187100 Rhododendron simsii HOM05D005367 ORTHO05D006328 1.4e-11 73.9 189 31.7
MBI17_g24635_MAGBIO Magnolia biondii HOM05D005367 ORTHO05D006328 1.2e-10 70.9 190 28.4
FAN06G3705 Fragaria x ananassa HOM05D005367 ORTHO05D006328 2.1e-10 70.1 149 34.2
FAN06G4288 Fragaria x ananassa HOM05D005367 ORTHO05D006328 2.1e-10 70.1 149 34.2
Dinv35219 Davidia involucrata HOM05D005367 ORTHO05D006328 7.9e-10 68.2 105 39.0
AUR62022549 Chenopodium quinoa HOM05D005367 ORTHO05D006328 1.0e-09 67.8 36 83.3
DCAR_000242 Daucus carota HOM05D005367 ORTHO05D006328 6.7e-09 65.1 106 38.7
Aa31LG1G11100 Aethionema arabicum HOM05D005367 ORTHO05D006328 8.7e-09 64.7 50 56.0
AUR62022543 Chenopodium quinoa HOM05D000713 ORTHO05D000547 1.1e-08 64.3 95 36.8
MD01G1056800 Malus domestica HOM05D005367 ORTHO05D006328 2.8e-07 59.7 81 44.4
Prupe.2G295600 Prunus persica HOM05D005367 ORTHO05D006328 6.2e-07 58.5 116 37.9
Aa31LG1G11110 Aethionema arabicum HOM05D005367 ORTHO05D006328 1.4e-06 57.4 112 32.1
Os04g0556900 Oryza sativa ssp. japonica HOM05D005367 ORTHO05D006328 1.8e-06 57.0 162 29.0
SEGI_25569 Sequoiadendron giganteum HOM05D019105 ORTHO05D006328 5.3e-06 55.5 113 34.5


User provided reference genes

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