Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00045 Eucalyptus grandis HOM05D002242 ORTHO05D002275 2.4e-75 285.4 142 100.0
PGR042G3115 Punica granatum HOM05D002242 ORTHO05D002275 2.2e-25 119.4 127 53.5
Duzib138G1576 Durio zibethinus HOM05D002242 ORTHO05D002275 3.6e-23 112.1 132 50.0
Thecc.01G340500 Theobroma cacao HOM05D002242 ORTHO05D002275 2.6e-21 105.9 133 50.4
Gohir.D11G102500 Gossypium hirsutum HOM05D002242 ORTHO05D002275 5.7e-21 104.8 132 49.2
Atru.chr5.685 Acer truncatum HOM05D002242 ORTHO05D002275 1.3e-20 103.6 157 44.6
Gohir.A11G097800 Gossypium hirsutum HOM05D002242 ORTHO05D002275 2.2e-20 102.8 132 48.5
Gorai.007G109600 Gossypium raimondii HOM05D002242 ORTHO05D002275 2.8e-20 102.4 104 53.8
Gohir.D07G142066 Gossypium hirsutum HOM05D002242 ORTHO05D002275 4.8e-20 101.7 122 45.9
Gorai.001G153800 Gossypium raimondii HOM05D002242 ORTHO05D002275 4.8e-20 101.7 122 45.9
Gohir.A07G136800 Gossypium hirsutum HOM05D002242 ORTHO05D002275 6.3e-20 101.3 122 45.9
Haze_15674 Corylus avellana HOM05D002242 ORTHO05D002275 2.4e-19 99.4 133 48.1
Sabra02G0140300 Salix brachista HOM05D002242 ORTHO05D002275 1.2e-18 97.1 135 48.1
CiPaw.01G077500 Carya illinoinensis HOM05D002242 ORTHO05D002275 2.7e-18 95.9 116 48.3
FAN01G2189 Fragaria x ananassa HOM05D002242 ORTHO05D002275 3.5e-18 95.5 128 47.7
RcHm_v2.0_Chr1g0360071 Rosa chinensis HOM05D002242 ORTHO05D002275 3.5e-18 95.5 128 48.4
Prupe.2G190500 Prunus persica HOM05D002242 ORTHO05D002275 4.5e-18 95.1 126 46.8
Glyma.03G258400 Glycine max HOM05D002242 ORTHO05D002275 1.7e-17 93.2 92 50.0
Oeu004983.1 Olea europaea HOM05D002242 ORTHO05D002275 2.9e-17 92.4 117 47.0
Manes.05G021600 Manihot esculenta HOM05D002242 ORTHO05D002275 3.8e-17 92.0 134 47.0
FvH4_7g16850 Fragaria vesca HOM05D002242 ORTHO05D002275 5.0e-17 91.7 128 46.9
FAN06G0152 Fragaria x ananassa HOM05D002242 ORTHO05D002275 5.0e-17 91.7 128 46.9
FAN06G1161 Fragaria x ananassa HOM05D002242 ORTHO05D002275 5.0e-17 91.7 128 46.9
FAN10G2930 Fragaria x ananassa HOM05D002242 ORTHO05D002275 5.0e-17 91.7 128 46.9
FAN10G3865 Fragaria x ananassa HOM05D002242 ORTHO05D002275 5.0e-17 91.7 128 46.9
Phvul.006G114400 Phaseolus vulgaris HOM05D002242 ORTHO05D002275 6.5e-17 91.3 101 52.5
QL08p045696 Quercus lobata HOM05D002242 ORTHO05D002275 6.5e-17 91.3 133 45.1
MD07G1152200 Malus domestica HOM05D002242 ORTHO05D002275 1.5e-16 90.1 111 49.5
FAN03G2616 Fragaria x ananassa HOM05D002242 ORTHO05D002275 1.9e-16 89.7 100 50.0
TWI23G0291 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 2.5e-16 89.4 135 43.7
CANSAT56G1040 Cannabis sativa HOM05D002242 ORTHO05D002275 3.3e-16 89.0 122 47.5
Ciclev10021650m.g Citrus clementina HOM05D002242 ORTHO05D002275 9.5e-16 87.4 138 41.3
Cc02_g39550 Coffea canephora HOM05D002242 ORTHO05D002275 9.5e-16 87.4 120 48.3
Lj3g0010764 Lotus japonicus HOM05D002242 ORTHO05D002275 1.2e-15 87.0 99 48.5
Gorai.008G126300 Gossypium raimondii HOM05D002242 ORTHO05D002275 1.6e-15 86.7 140 40.0
Cpa.g.sc96.41 Carica papaya HOM05D002242 ORTHO05D002275 2.1e-15 86.3 128 43.8
Gohir.A12G113100 Gossypium hirsutum HOM05D002242 ORTHO05D002275 3.6e-15 85.5 140 40.0
Hma1.2p1_0101F.1_g049310 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 3.6e-15 85.5 113 46.9
VMungo0540G1854 Vigna mungo HOM05D002242 ORTHO05D002275 4.7e-15 85.1 102 50.0
Dinv32603 Davidia involucrata HOM05D002242 ORTHO05D002275 8.0e-15 84.3 105 48.6
Gohir.D12G116600 Gossypium hirsutum HOM05D002242 ORTHO05D002275 8.0e-15 84.3 140 39.3
Manes.01G244900 Manihot esculenta HOM05D002242 ORTHO05D002275 1.0e-14 84.0 133 44.4
Lj1g0020065 Lotus japonicus HOM05D002242 ORTHO05D002275 1.8e-14 83.2 122 44.3
Dinv37328 Davidia involucrata HOM05D002242 ORTHO05D002275 2.3e-14 82.8 106 46.2
Gohir.A12G249200 Gossypium hirsutum HOM05D002242 ORTHO05D002275 2.3e-14 82.8 125 44.0
MD01G1083500 Malus domestica HOM05D002242 ORTHO05D002275 2.3e-14 82.8 111 47.7
GSVIVG01027167001 Vitis vinifera HOM05D002242 ORTHO05D002275 3.0e-14 82.4 124 44.4
Glyma.07G054700 Glycine max HOM05D002242 ORTHO05D002275 4.0e-14 82.0 94 47.9
Hma1.2p1_0390F.1_g142630 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 4.0e-14 82.0 123 43.9
Psat4g214600 Pisum sativum HOM05D002242 ORTHO05D002275 4.0e-14 82.0 89 46.1
Glyma.16G023500 Glycine max HOM05D002242 ORTHO05D002275 8.9e-14 80.9 137 39.4
Dinv34219 Davidia involucrata HOM05D002242 ORTHO05D002275 1.5e-13 80.1 103 46.6
Oeu004958.1 Olea europaea HOM05D002242 ORTHO05D002275 1.5e-13 80.1 87 49.4
Potri.002G172900 Populus trichocarpa HOM05D002242 ORTHO05D002275 1.5e-13 80.1 135 43.7
Thecc.03G200400 Theobroma cacao HOM05D002242 ORTHO05D002275 2.6e-13 79.3 125 43.2
Gorai.008G268100 Gossypium raimondii HOM05D002242 ORTHO05D002275 3.4e-13 79.0 125 42.4
Medtr7g117695 Medicago truncatula HOM05D002242 ORTHO05D002275 3.4e-13 79.0 134 42.5
TPR.G4734 Trifolium pratense HOM05D002242 ORTHO05D002275 3.4e-13 79.0 94 51.1
TWI14G0218 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 3.4e-13 79.0 135 40.7
Actinidia07972 Actinidia chinensis HOM05D002242 ORTHO05D002275 5.7e-13 78.2 129 45.7
Ciclev10021848m.g Citrus clementina HOM05D002242 ORTHO05D002275 5.7e-13 78.2 130 43.8
Lalb_Chr17g0342761 Lupinus albus HOM05D002242 ORTHO05D002275 5.7e-13 78.2 79 49.4
Gohir.D12G250000 Gossypium hirsutum HOM05D002242 ORTHO05D002275 7.5e-13 77.8 116 42.2
Sabra14G0073600 Salix brachista HOM05D002242 ORTHO05D002275 7.5e-13 77.8 129 42.6
ClCG05G000740 Citrullus lanatus HOM05D002242 ORTHO05D002275 9.8e-13 77.4 142 40.8
Manes.01G184600 Manihot esculenta HOM05D002242 ORTHO05D002275 9.8e-13 77.4 93 46.2
Medtr8g027435 Medicago truncatula HOM05D002242 ORTHO05D002275 9.8e-13 77.4 89 44.9
TAR425G0001 Trochodendron aralioides HOM05D002242 ORTHO05D002275 9.8e-13 77.4 90 44.4
Actinidia20250 Actinidia chinensis HOM05D002242 ORTHO05D002275 1.3e-12 77.0 129 45.0
Peaxi162Scf00087g02228 Petunia axillaris HOM05D002242 ORTHO05D002275 1.3e-12 77.0 86 52.3
TAR636G3588 Trochodendron aralioides HOM05D002242 ORTHO05D002275 1.3e-12 77.0 102 49.0
Potri.015G011900 Populus trichocarpa HOM05D002242 ORTHO05D002275 1.7e-12 76.6 84 48.8
CsaV3_3G007960 Cucumis sativus L. HOM05D002242 ORTHO05D002275 2.2e-12 76.3 144 41.0
TWI59G0079 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 2.2e-12 76.3 136 38.2
Lalb_Chr10g0100621 Lupinus albus HOM05D002242 ORTHO05D002275 2.8e-12 75.9 79 50.6
Sed0004473 Sechium edule HOM05D002242 ORTHO05D002275 2.8e-12 75.9 141 40.4
Potri.014G100200 Populus trichocarpa HOM05D002242 ORTHO05D002275 4.9e-12 75.1 99 48.5
Lsat_1_v5_gn_4_33660 Lactuca sativa HOM05D002242 ORTHO05D002275 6.3e-12 74.7 88 45.5
Lsat_1_v5_gn_6_85600 Lactuca sativa HOM05D002242 ORTHO05D002275 6.3e-12 74.7 88 45.5
Sed0026965 Sechium edule HOM05D002242 ORTHO05D002275 8.3e-12 74.3 123 39.8
Actinidia28112 Actinidia chinensis HOM05D002242 ORTHO05D002275 1.1e-11 73.9 127 40.9
ClCG06G002630 Citrullus lanatus HOM05D002242 ORTHO05D002275 1.8e-11 73.2 113 43.4
Nitab4.5_0004497g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 2.4e-11 72.8 76 50.0
CSS0021112 Camellia sinensis var. sinensis HOM05D002242 ORTHO05D002275 3.1e-11 72.4 114 45.6
DCAR_025263 Daucus carota HOM05D002242 ORTHO05D002275 3.1e-11 72.4 114 42.1
Psat3g001920 Pisum sativum HOM05D002242 ORTHO05D002275 3.1e-11 72.4 131 39.7
PGR142G4389 Punica granatum HOM05D002242 ORTHO05D002275 3.1e-11 72.4 122 36.9
MELO3C006014.2 Cucumis melo HOM05D002242 ORTHO05D002275 4.1e-11 72.0 144 39.6
Duzib084G0563 Durio zibethinus HOM05D002242 ORTHO05D002275 4.1e-11 72.0 101 45.5
Sabra15G0009600 Salix brachista HOM05D002242 ORTHO05D002275 4.1e-11 72.0 112 42.0
Dinv33197 Davidia involucrata HOM05D003796 ORTHO05D004486 5.4e-11 71.6 95 45.3
Glyma.19G257000 Glycine max HOM05D002242 ORTHO05D002275 7.0e-11 71.2 98 46.9
Nitab4.5_0003046g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 7.0e-11 71.2 76 48.7
Oeu043226.1 Olea europaea HOM05D002242 ORTHO05D002275 7.0e-11 71.2 116 43.1
DCAR_005401 Daucus carota HOM05D002242 ORTHO05D002275 9.2e-11 70.9 80 46.2
MSTRG.28269 Avicennia marina HOM05D002242 ORTHO05D002275 1.2e-10 70.5 131 40.5
Ah.05g179410 Amaranthus hybridus HOM05D002242 ORTHO05D002275 1.6e-10 70.1 104 45.2
COL.COLO4_16773 Corchorus olitorius HOM05D002242 ORTHO05D002275 1.6e-10 70.1 127 39.4
Migut.O00897 Erythranthe guttata HOM05D002242 ORTHO05D002275 1.6e-10 70.1 89 42.7
Lalb_Chr18g0044551 Lupinus albus HOM05D002242 ORTHO05D002275 1.6e-10 70.1 91 49.5
SalBow5G1307 Salvia bowleyana HOM05D002242 ORTHO05D002275 2.7e-10 69.3 88 43.2
EL10Ac3g05266 Beta vulgaris HOM05D002242 ORTHO05D002275 3.5e-10 68.9 94 42.6
Ca_09517_v3 Cicer arietinum L. HOM05D002242 ORTHO05D002275 3.5e-10 68.9 126 38.9
Duzib205G1627 Durio zibethinus HOM05D002242 ORTHO05D002275 4.5e-10 68.6 125 38.4
TPR.G20223 Trifolium pratense HOM05D002242 ORTHO05D002275 4.5e-10 68.6 83 44.6
Hma1.2p1_0404F.1_g145270 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 5.9e-10 68.2 130 38.5
Hma1.2p1_1587F.1_g292270 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 7.8e-10 67.8 130 38.5
Oeu007879.1 Olea europaea HOM05D002242 ORTHO05D002275 7.8e-10 67.8 97 42.3
ECA234G4607 Erigeron canadensis HOM05D002242 ORTHO05D002275 1.3e-09 67.0 104 38.5
Rhsim07G0003200 Rhododendron simsii HOM05D002242 ORTHO05D002275 1.3e-09 67.0 63 55.6
COL.COLO4_06225 Corchorus olitorius HOM05D002242 ORTHO05D002275 1.7e-09 66.6 137 38.0
MELO3C022264.2 Cucumis melo HOM05D000003 ORTHO05D000004 2.3e-09 66.2 89 43.8
HanXRQChr16g0524311 Helianthus annuus HOM05D002242 ORTHO05D002275 2.3e-09 66.2 75 45.3
Manes.02G144300 Manihot esculenta HOM05D002242 ORTHO05D002275 2.3e-09 66.2 103 39.8
Rhsim03G0209500 Rhododendron simsii HOM05D002242 ORTHO05D002275 2.3e-09 66.2 102 39.2
Hund27189 Selenicereus undatus HOM05D002242 ORTHO05D002275 2.9e-09 65.9 88 46.6
MD07G1286900 Malus domestica HOM05D002242 ORTHO05D002275 3.8e-09 65.5 78 46.2
Cfa016239 Carpinus fangiana HOM05D002242 ORTHO05D002275 5.0e-09 65.1 101 45.5
AUR62004507 Chenopodium quinoa HOM05D002242 ORTHO05D002275 5.0e-09 65.1 67 52.2
CsaV3_6G008510 Cucumis sativus L. HOM05D002242 ORTHO05D002275 5.0e-09 65.1 63 52.4
vmacro13169 Vaccinium macrocarpon HOM05D002242 ORTHO05D002275 5.0e-09 65.1 56 57.1
MBI06_g38007_MAGBIO Magnolia biondii HOM05D002242 ORTHO05D002275 6.6e-09 64.7 67 47.8
PSO478G1176 Papaver somniferum HOM05D002242 ORTHO05D002275 8.6e-09 64.3 72 45.8
Actinidia08657 Actinidia chinensis HOM05D002242 ORTHO05D002275 1.1e-08 63.9 94 47.9
Gorai.003G121500 Gossypium raimondii HOM05D002242 ORTHO05D002275 1.1e-08 63.9 89 39.3
MD01G1217700 Malus domestica HOM05D002242 ORTHO05D002275 1.1e-08 63.9 78 44.9
PSO782G1347 Papaver somniferum HOM05D002242 ORTHO05D002275 1.1e-08 63.9 72 45.8
Peaxi162Scf00345g00124 Petunia axillaris HOM05D002242 ORTHO05D002275 1.5e-08 63.5 94 40.4
CiPaw.06G045500 Carya illinoinensis HOM05D002242 ORTHO05D002275 1.9e-08 63.2 103 42.7
Prupe.2G309000 Prunus persica HOM05D002242 ORTHO05D002275 1.9e-08 63.2 94 41.5
vmacro06390 Vaccinium macrocarpon HOM05D002242 ORTHO05D002275 1.9e-08 63.2 91 41.8
Migut.N01536 Erythranthe guttata HOM05D002242 ORTHO05D002275 2.5e-08 62.8 103 38.8
Sc25g0000930 Simmondsia chinensis HOM05D002242 ORTHO05D002275 2.5e-08 62.8 63 50.8
Gohir.D03G115200 Gossypium hirsutum HOM05D002242 ORTHO05D002275 3.3e-08 62.4 89 38.2
Aqoxy4G02751 Aquilegia oxysepala HOM05D002242 ORTHO05D002275 4.3e-08 62.0 104 41.3
Sopen01g039800 Solanum pennellii HOM05D002242 ORTHO05D002275 4.3e-08 62.0 103 39.8
PGSC0003DMG400000119 Solanum tuberosum HOM05D002242 ORTHO05D002275 4.3e-08 62.0 103 39.8
EL10Ac1g00249 Beta vulgaris HOM05D002242 ORTHO05D002275 5.6e-08 61.6 89 43.8
Sed0023472 Sechium edule HOM05D002242 ORTHO05D002275 5.6e-08 61.6 106 37.7
Haze_00202 Corylus avellana HOM05D002242 ORTHO05D002275 7.3e-08 61.2 101 42.6
Peaxi162Scf00716g00032 Petunia axillaris HOM05D000078 ORTHO05D000025 7.3e-08 61.2 60 50.0
MSTRG.17354 Avicennia marina HOM05D002242 ORTHO05D002275 9.5e-08 60.8 131 35.1
SalBow3G1264 Salvia bowleyana HOM05D002242 ORTHO05D002275 1.2e-07 60.5 106 38.7
Gohir.A03G051900 Gossypium hirsutum HOM05D002242 ORTHO05D002275 1.6e-07 60.1 89 38.2
Migut.B01887 Erythranthe guttata HOM05D002242 ORTHO05D002275 2.1e-07 59.7 102 42.2
FAN03G3456 Fragaria x ananassa HOM05D002242 ORTHO05D002275 2.1e-07 59.7 98 40.8
FAN06G4446 Fragaria x ananassa HOM05D002242 ORTHO05D002275 2.1e-07 59.7 98 40.8
Nitab4.5_0001763g0050 Nicotiana tabacum HOM05D002242 ORTHO05D002275 2.1e-07 59.7 109 36.7
Oeu060992.1 Olea europaea HOM05D002242 ORTHO05D002275 2.1e-07 59.7 95 41.1
Solyc01g096080.3 Solanum lycopersicum HOM05D002242 ORTHO05D002275 2.1e-07 59.7 92 39.1
CAN.G1415.21 Capsicum annuum HOM05D002242 ORTHO05D002275 2.8e-07 59.3 94 39.4
Dinv29268 Davidia involucrata HOM05D002242 ORTHO05D002275 2.8e-07 59.3 102 38.2
RcHm_v2.0_Chr1g0380431 Rosa chinensis HOM05D002242 ORTHO05D002275 2.8e-07 59.3 132 37.9
SGA_v2.0_scaffold232G43549 Striga asiatica HOM05D002242 ORTHO05D002275 2.8e-07 59.3 100 41.0
QL09p008666 Quercus lobata HOM05D002242 ORTHO05D002275 3.6e-07 58.9 71 46.5
Ah.13g070390 Amaranthus hybridus HOM05D002242 ORTHO05D002275 4.7e-07 58.5 101 36.6
CsaV3_3G019790 Cucumis sativus L. HOM05D002242 ORTHO05D002275 4.7e-07 58.5 93 38.7
HanXRQChr17g0563391 Helianthus annuus HOM05D002242 ORTHO05D002275 4.7e-07 58.5 73 45.2
Potri.012G016700 Populus trichocarpa HOM05D002242 ORTHO05D002275 4.7e-07 58.5 87 41.4
THA.LOC104817373 Tarenaya hassleriana HOM05D010353 ORTHO05D011141 4.7e-07 58.5 108 37.0
FAN01G0248 Fragaria x ananassa HOM05D002242 ORTHO05D002275 6.1e-07 58.2 98 40.8
TWI39G0876 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 6.1e-07 58.2 95 41.1
MELO3C008501.2 Cucumis melo HOM05D002242 ORTHO05D002275 8.0e-07 57.8 85 41.2
Nitab4.5_0010712g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 8.0e-07 57.8 109 36.7
arahy.Tifrunner.gnm1.ann1.NAPQ43 Arachis hypogaea HOM05D002242 ORTHO05D002275 1.0e-06 57.4 75 45.3
arahy.Tifrunner.gnm1.ann1.S82JHH Arachis hypogaea HOM05D002242 ORTHO05D002275 1.0e-06 57.4 75 45.3
ClCG05G008990 Citrullus lanatus HOM05D002242 ORTHO05D002275 1.4e-06 57.0 85 41.2
FvH4_7g31360 Fragaria vesca HOM05D002242 ORTHO05D002275 1.4e-06 57.0 98 38.8
FAN06G3788 Fragaria x ananassa HOM05D002242 ORTHO05D002275 1.4e-06 57.0 98 38.8
HPP92_024616 Vanilla planifolia HOM05D002242 ORTHO05D002275 1.4e-06 57.0 89 38.2
arahy.Tifrunner.gnm1.ann1.QL2KDB Arachis hypogaea HOM05D002242 ORTHO05D002275 1.8e-06 56.6 64 51.6
Lj4g0010373 Lotus japonicus HOM05D002242 ORTHO05D002275 1.8e-06 56.6 84 41.7
Sc01g0002560 Simmondsia chinensis HOM05D002242 ORTHO05D002275 1.8e-06 56.6 89 40.4
CiPaw.05G197700 Carya illinoinensis HOM05D002242 ORTHO05D002275 2.3e-06 56.2 62 46.8
SGA_v2.0_scaffold44G16810 Striga asiatica HOM05D002242 ORTHO05D002275 2.3e-06 56.2 90 40.0
unitig_899.g14793 Utricularia gibba HOM05D002242 ORTHO05D002275 2.3e-06 56.2 99 40.4
arahy.Tifrunner.gnm1.ann1.73LR1S Arachis hypogaea HOM05D002242 ORTHO05D002275 4.0e-06 55.5 60 48.3
DCAR_020326 Daucus carota HOM05D002242 ORTHO05D002275 4.0e-06 55.5 91 38.5
Rhsim01G0174300 Rhododendron simsii HOM05D002242 ORTHO05D002275 4.0e-06 55.5 134 35.1
Nitab4.5_0007888g0030 Nicotiana tabacum HOM05D002242 ORTHO05D002275 5.2e-06 55.1 83 39.8
Oeu041061.1 Olea europaea HOM05D002242 ORTHO05D002275 5.2e-06 55.1 58 44.8
THA.LOC104825150 Tarenaya hassleriana HOM05D002242 ORTHO05D002275 6.8e-06 54.7 97 38.1
Nn1g00284 Nelumbo nucifera HOM05D002242 ORTHO05D002275 8.9e-06 54.3 72 44.4


User provided reference genes

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