Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E00013 Eucalyptus grandis HOM05D007122 ORTHO05D008918 2.8e-157 558.5 279 100.0
QL05p084392 Quercus lobata HOM05D007122 ORTHO05D008918 5.3e-103 378.3 279 69.5
CiPaw.01G090900 Carya illinoinensis HOM05D007122 ORTHO05D008918 2.8e-96 355.9 278 65.8
TWI59G0863 Tripterygium wilfordii HOM05D007122 ORTHO05D008918 1.1e-95 354.0 280 66.8
CANSAT01G1971 Cannabis sativa HOM05D007122 ORTHO05D008918 1.8e-95 353.2 285 64.2
MD17G1162500 Malus domestica HOM05D007122 ORTHO05D008918 2.4e-95 352.8 246 72.0
Prupe.3G022800 Prunus persica HOM05D007122 ORTHO05D008918 5.8e-94 348.2 246 70.3
TAR629G1569 Trochodendron aralioides HOM05D007122 ORTHO05D008918 1.3e-93 347.1 278 64.4
GSVIVG01027487001 Vitis vinifera HOM05D007122 ORTHO05D008918 8.4e-93 344.4 278 66.2
Thecc.01G329100 Theobroma cacao HOM05D007122 ORTHO05D008918 2.5e-92 342.8 229 76.0
Glyma.07G002100 Glycine max HOM05D007122 ORTHO05D008918 4.2e-92 342.0 271 67.2
Atru.chr5.816 Acer truncatum HOM05D007122 ORTHO05D008918 7.1e-92 341.3 239 71.5
Cpa.g.sc57.60 Carica papaya HOM05D007122 ORTHO05D008918 9.3e-92 340.9 234 73.5
Potri.002G183700 Populus trichocarpa HOM05D007122 ORTHO05D008918 1.6e-91 340.1 245 71.0
Nn1g00501 Nelumbo nucifera HOM05D007122 ORTHO05D008918 4.6e-91 338.6 279 64.9
RcHm_v2.0_Chr2g0149531 Rosa chinensis HOM05D007122 ORTHO05D008918 6.0e-91 338.2 234 72.2
FAN05G3936 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.0e-90 337.4 234 71.4
FAN14G1589 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.0e-90 337.4 234 70.9
Gohir.D11G107500 Gossypium hirsutum HOM05D007122 ORTHO05D008918 1.3e-90 337.0 234 72.2
Phvul.010G164100 Phaseolus vulgaris HOM05D007122 ORTHO05D008918 1.3e-90 337.0 221 74.7
FvH4_6g36990 Fragaria vesca HOM05D007122 ORTHO05D008918 2.3e-90 336.3 234 70.9
Gorai.007G115100 Gossypium raimondii HOM05D007122 ORTHO05D008918 2.3e-90 336.3 239 71.1
COL.COLO4_23084 Corchorus olitorius HOM05D007122 ORTHO05D008918 3.0e-90 335.9 229 74.2
Hma1.2p1_0074F.1_g038925 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 3.9e-90 335.5 238 71.4
MBI12_g33188_MAGBIO Magnolia biondii HOM05D007122 ORTHO05D008918 3.9e-90 335.5 244 71.7
Peaxi162Scf00822g00313 Petunia axillaris HOM05D007122 ORTHO05D008918 1.9e-89 333.2 269 63.9
Ciclev10021604m.g Citrus clementina HOM05D007122 ORTHO05D008918 3.3e-89 332.4 255 68.2
Cc02_g30330 Coffea canephora HOM05D007122 ORTHO05D008918 3.3e-89 332.4 224 73.2
Lj3g0016159 Lotus japonicus HOM05D007122 ORTHO05D008918 2.1e-88 329.7 228 71.5
ClCG07G014660 Citrullus lanatus HOM05D007122 ORTHO05D008918 4.8e-88 328.6 233 70.8
Sopen08g022350 Solanum pennellii HOM05D007122 ORTHO05D008918 6.3e-88 328.2 243 68.3
MSTRG.12208 Avicennia marina HOM05D007122 ORTHO05D008918 1.1e-87 327.4 256 65.6
arahy.Tifrunner.gnm1.ann1.XK7RJX Arachis hypogaea HOM05D007122 ORTHO05D008918 2.4e-87 326.2 222 72.5
CAN.G21.48 Capsicum annuum HOM05D007122 ORTHO05D008918 3.1e-87 325.9 239 68.2
CsaV3_3G030490 Cucumis sativus L. HOM05D007122 ORTHO05D008918 3.1e-87 325.9 242 68.6
Thhalv10001577m.g Eutrema salsugineum HOM05D007122 ORTHO05D008918 3.1e-87 325.9 226 70.4
AUR62028625 Chenopodium quinoa HOM05D007122 ORTHO05D008918 4.1e-87 325.5 272 62.5
AUR62008050 Chenopodium quinoa HOM05D007122 ORTHO05D008918 5.3e-87 325.1 222 72.5
MELO3C026712.2 Cucumis melo HOM05D007122 ORTHO05D008918 5.3e-87 325.1 233 70.0
Sp4g28930 Schrenkiella parvula HOM05D007122 ORTHO05D008918 5.3e-87 325.1 226 70.8
Carub.0004s2963 Capsella rubella HOM05D007122 ORTHO05D008918 6.9e-87 324.7 233 69.1
Ca_20970_v3 Cicer arietinum L. HOM05D007122 ORTHO05D008918 9.0e-87 324.3 272 61.8
Solyc08g068590.4 Solanum lycopersicum HOM05D007122 ORTHO05D008918 1.2e-86 323.9 243 67.1
Medtr4g005390 Medicago truncatula HOM05D007122 ORTHO05D008918 1.5e-86 323.6 244 66.4
EL10Ac5g10570 Beta vulgaris HOM05D007122 ORTHO05D008918 2.0e-86 323.2 242 66.5
Lalb_Chr04g0264851 Lupinus albus HOM05D007122 ORTHO05D008918 3.4e-86 322.4 221 71.9
CARHR142260 Cardamine hirsuta HOM05D007122 ORTHO05D008918 5.9e-86 321.6 277 60.6
Lj9A610T61 Lonicera japonica HOM05D007122 ORTHO05D008918 5.9e-86 321.6 225 75.6
AT2G46910 Arabidopsis thaliana HOM05D007122 ORTHO05D008918 7.6e-86 321.2 226 69.5
TPR.G38811 Trifolium pratense HOM05D007122 ORTHO05D008918 1.0e-85 320.9 229 71.6
arahy.Tifrunner.gnm1.ann1.KLKB5C Arachis hypogaea HOM05D007122 ORTHO05D008918 1.3e-85 320.5 222 71.2
Aa31LG1G28270 Aethionema arabicum HOM05D007122 ORTHO05D008918 2.9e-85 319.3 233 69.1
A05p00930 Brassica napus HOM05D007122 ORTHO05D008918 6.5e-85 318.2 275 60.4
PSO782G5442 Papaver somniferum HOM05D007122 ORTHO05D008918 8.5e-85 317.8 243 66.3
BcaC02g12634 Brassica carinata HOM05D007122 ORTHO05D008918 1.9e-84 316.6 226 68.6
Nitab4.5_0006202g0020 Nicotiana tabacum HOM05D007122 ORTHO05D008918 7.2e-84 314.7 221 71.5
Actinidia33027 Actinidia chinensis HOM05D007122 ORTHO05D008918 2.1e-83 313.2 288 60.4
THA.LOC104802109 Tarenaya hassleriana HOM05D007122 ORTHO05D008918 2.1e-83 313.2 275 60.7
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 2.7e-83 312.8 227 68.7
PGR042G2951 Punica granatum HOM05D007122 ORTHO05D008918 2.7e-83 312.8 239 65.3
BraA05t19094Z Brassica rapa HOM05D007122 ORTHO05D008918 3.6e-83 312.4 276 59.8
CDE02G4652 Ceratophyllum demersum HOM05D007122 ORTHO05D008918 6.1e-83 311.6 242 66.5
HanXRQChr16g0524441 Helianthus annuus HOM05D007122 ORTHO05D008918 6.1e-83 311.6 240 67.1
HPP92_007409 Vanilla planifolia HOM05D007122 ORTHO05D008918 6.1e-83 311.6 284 59.9
Oeu050289.1 Olea europaea HOM05D007122 ORTHO05D008918 1.1e-81 307.4 221 68.8
PGSC0003DMG400029047 Solanum tuberosum HOM05D007122 ORTHO05D008918 1.9e-81 306.6 273 59.7
ATR0579G047 Amborella trichopoda HOM05D007122 ORTHO05D008918 4.3e-81 305.4 236 65.7
vmacro08515 Vaccinium macrocarpon HOM05D007122 ORTHO05D008918 4.3e-81 305.4 228 70.2
Os10g0509200 Oryza sativa ssp. japonica HOM05D007122 ORTHO05D008918 2.2e-80 303.1 274 58.0
Rhsim04G0175900 Rhododendron simsii HOM05D007122 ORTHO05D008918 1.1e-79 300.8 301 55.8
Sabra02G0131900 Salix brachista HOM05D007122 ORTHO05D008918 2.4e-79 299.7 333 53.5
unitig_0.g1006 Utricularia gibba HOM05D007122 ORTHO05D003998 6.9e-79 298.1 220 65.5
ECA234G3018 Erigeron canadensis HOM05D007122 ORTHO05D008918 5.9e-78 295.0 220 68.6
Hund02816 Selenicereus undatus HOM05D007122 ORTHO05D008918 1.0e-77 294.3 222 68.9
Zm00001eb220590 Zea mays HOM05D007122 ORTHO05D008918 5.0e-77 292.0 222 66.7
Manes.01G237100 Manihot esculenta HOM05D007122 ORTHO05D008918 1.1e-73 280.8 202 71.8
Sed0017612 Sechium edule HOM05D007122 ORTHO05D008918 4.4e-73 278.9 190 72.1
Dinv25395 Davidia involucrata HOM05D007122 ORTHO05D008918 1.4e-71 273.9 238 62.2
VMungo0331G0463 Vigna mungo HOM05D000070 ORTHO05D003491 6.9e-71 271.6 188 71.8
Gohir.A11G103000 Gossypium hirsutum HOM05D007122 ORTHO05D008918 3.8e-69 265.8 182 73.1
Lsat_1_v5_gn_4_31280 Lactuca sativa HOM05D007122 ORTHO05D008918 4.2e-68 262.3 210 64.3
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 2.1e-67 260.0 201 65.7
Aqoxy5G04392 Aquilegia oxysepala HOM05D007122 ORTHO05D008918 8.5e-61 238.0 204 62.7
Mapoly0069s0014 Marchantia polymorpha HOM05D007122 ORTHO05D008918 1.9e-60 236.9 229 55.5
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 4.2e-60 235.7 184 64.1
SMO232G0083 Selaginella moellendorffii HOM05D007122 ORTHO05D008918 4.2e-60 235.7 234 53.4
Ah.11g050690 Amaranthus hybridus HOM05D007122 ORTHO05D008918 3.6e-59 232.6 236 53.4
SGA_v2.0_scaffold104G30244 Striga asiatica HOM05D007122 ORTHO05D008918 3.6e-59 232.6 233 54.9
Glyma.08G224600 Glycine max HOM05D007122 ORTHO05D008918 5.3e-55 218.8 152 72.4
Duzib133G0914 Durio zibethinus HOM05D007122 ORTHO05D008918 1.7e-53 213.8 188 60.6
PSO063G7482 Papaver somniferum HOM05D007122 ORTHO05D008918 5.0e-53 212.2 144 71.5
Dinv32665 Davidia involucrata HOM05D007122 ORTHO05D008918 2.5e-52 209.9 154 68.8
Pp3c11_15290 Physcomitrium patens HOM05D007122 ORTHO05D008918 7.2e-52 208.4 203 50.7
Sc05g0001590 Simmondsia chinensis HOM05D007122 ORTHO05D008918 2.3e-50 203.4 157 64.3
Haze_16258 Corylus avellana HOM05D007122 ORTHO05D008918 1.2e-49 201.1 349 41.0
Glyma.14G134000 Glycine max HOM05D007122 ORTHO05D008918 9.8e-49 198.0 153 65.4
FAN02G0509 Fragaria x ananassa HOM05D007122 ORTHO05D008918 6.3e-48 195.3 199 53.8
Migut.N02127 Erythranthe guttata HOM05D007122 ORTHO05D008918 9.5e-44 181.4 143 65.0
QL05p083819 Quercus lobata HOM05D007122 ORTHO05D008918 4.4e-33 146.0 178 47.8
MCO07G119 Micromonas commoda HOM05D007122 ORTHO05D008918 3.3e-28 129.8 273 35.9
Pp3c2_10460 Physcomitrium patens HOM05D007122 ORTHO05D008918 1.8e-26 124.0 143 40.6
Psat7g265400 Pisum sativum HOM05D007122 ORTHO05D008918 2.3e-26 123.6 86 72.1
Cre01.g039550 Chlamydomonas reinhardtii HOM05D007122 ORTHO05D008918 4.0e-26 122.9 238 35.7
Zm00001eb094490 Zea mays HOM05D007122 ORTHO05D008918 2.6e-25 120.2 86 67.4
Hma1.2p1_0074F.1_g038930 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 1.5e-20 104.4 60 81.7
FAN05G3242 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.8e-10 70.9 36 88.9
FAN14G0283 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.8e-10 70.9 36 88.9
SGA_v2.0_scaffold159G37569 Striga asiatica HOM05D007122 ORTHO05D008918 6.8e-10 68.9 116 35.3
FvH4_6g35960 Fragaria vesca HOM05D007122 ORTHO05D008918 8.9e-10 68.6 36 86.1
PRCOL_00002778 Prasinoderma coloniale HOM05D007122 ORTHO05D008918 1.5e-09 67.8 231 32.9
BolC7t41898H Brassica oleracea HOM05D006432 ORTHO05D008257 2.2e-08 63.9 205 31.7
BcaC06g35517 Brassica carinata HOM05D006432 ORTHO05D008257 2.9e-08 63.5 205 31.7
C07p14010 Brassica napus HOM05D006432 ORTHO05D008257 2.9e-08 63.5 254 29.5
unitig_0.g1188 Utricularia gibba HOM05D006432 ORTHO05D008257 3.8e-08 63.2 252 25.4
THA.LOC104804760 Tarenaya hassleriana HOM05D006432 ORTHO05D008257 4.9e-08 62.8 269 26.8
BraA07t28698Z Brassica rapa HOM05D006432 ORTHO05D008257 6.4e-08 62.4 209 31.1
CBR_g49209 Chara braunii HOM05D002234 ORTHO05D002254 8.4e-08 62.0 158 32.9
A07p09040 Brassica napus HOM05D006432 ORTHO05D008257 1.1e-07 61.6 209 31.1
Carub.0003s2366 Capsella rubella HOM05D006432 ORTHO05D008257 1.4e-07 61.2 165 34.5
Mapoly0070s0031 Marchantia polymorpha HOM05D002234 ORTHO05D002254 1.4e-07 61.2 238 28.2
MSTRG.14623 Avicennia marina HOM05D002234 ORTHO05D002254 2.4e-07 60.5 237 25.7
CANSAT56G3028 Cannabis sativa HOM05D002234 ORTHO05D002254 2.4e-07 60.5 158 32.3
SMO367G0795 Selaginella moellendorffii HOM05D002234 ORTHO05D002254 2.4e-07 60.5 238 27.7
CANSAT56G3737 Cannabis sativa HOM05D002234 ORTHO05D002254 4.1e-07 59.7 158 32.3
AagrBONN_evm.TU.Sc2ySwM_369.590 Anthoceros agrestis HOM05D002234 ORTHO05D002254 7.1e-07 58.9 251 26.7
Thhalv10021276m.g Eutrema salsugineum HOM05D006432 ORTHO05D008257 7.1e-07 58.9 209 30.1
FAN09G2218 Fragaria x ananassa HOM05D007122 ORTHO05D008918 7.1e-07 58.9 49 57.1
Peaxi162Scf00392g00732 Petunia axillaris HOM05D006432 ORTHO05D008257 1.2e-06 58.2 162 30.2
Cre03.g189300 Chlamydomonas reinhardtii HOM05D002234 ORTHO05D002254 2.1e-06 57.4 303 21.8
QL05p084699 Quercus lobata HOM05D007122 ORTHO05D008918 2.1e-06 57.4 46 58.7
CANSAT78G0744 Cannabis sativa HOM05D006432 ORTHO05D008257 2.7e-06 57.0 218 27.5
Aa31LG8G9890 Aethionema arabicum HOM05D006432 ORTHO05D008257 3.5e-06 56.6 171 32.2
Pp3c15_4460 Physcomitrium patens HOM05D002234 ORTHO05D002254 3.5e-06 56.6 231 26.8
CDE04G1021 Ceratophyllum demersum HOM05D002234 ORTHO05D002254 4.6e-06 56.2 143 32.2
Ciclev10007095m.g Citrus clementina HOM05D006432 ORTHO05D008257 6.0e-06 55.8 212 29.7
Sp3g21070 Schrenkiella parvula HOM05D006432 ORTHO05D008257 7.8e-06 55.5 171 31.6


User provided reference genes

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