Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.3e-154 549.7 280 100.0
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 4.9e-109 398.3 280 73.6
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 6.4e-109 397.9 281 74.4
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 5.5e-108 394.8 280 75.0
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 7.9e-107 391.0 283 72.4
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 1.3e-106 390.2 280 71.4
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 6.7e-106 387.9 280 72.1
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 1.1e-105 387.1 284 70.8
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 3.3e-105 385.6 282 71.3
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 5.7e-105 384.8 280 71.4
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 7.4e-105 384.4 282 69.9
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 1.3e-104 383.6 280 71.1
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 1.6e-104 383.3 280 71.1
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.4e-103 380.2 282 70.2
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 1.4e-103 380.2 284 71.5
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 1.8e-103 379.8 280 70.7
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 1.8e-103 379.8 293 68.6
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 6.9e-103 377.9 282 70.2
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 1.5e-102 376.7 286 69.6
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 3.4e-102 375.6 276 71.7
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 5.8e-102 374.8 280 69.6
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.8e-102 374.8 295 68.1
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 7.6e-102 374.4 281 70.5
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 7.6e-102 374.4 283 68.9
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.2e-101 372.9 282 69.9
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 2.9e-101 372.5 280 69.6
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 4.9e-101 371.7 280 68.9
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 4.9e-101 371.7 283 68.2
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 6.5e-101 371.3 283 69.6
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 8.4e-101 370.9 280 68.9
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.4e-101 370.9 284 69.7
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 1.4e-100 370.2 282 69.9
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 2.5e-100 369.4 287 67.6
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 2.5e-100 369.4 280 68.6
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 2.5e-100 369.4 284 68.7
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 3.2e-100 369.0 283 69.6
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 3.2e-100 369.0 283 69.6
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 5.5e-100 368.2 283 69.3
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 9.3e-100 367.5 280 67.5
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 1.6e-99 366.7 282 67.4
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 1.6e-99 366.7 284 68.3
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 2.1e-99 366.3 284 66.9
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 2.7e-99 365.9 283 66.8
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 3.5e-99 365.5 292 65.4
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 3.5e-99 365.5 287 66.6
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 3.5e-99 365.5 284 68.3
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 6.1e-99 364.8 270 72.6
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 1.3e-98 363.6 283 67.8
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 1.3e-98 363.6 305 65.2
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 1.8e-98 363.2 280 67.5
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 1.8e-98 363.2 280 67.5
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.3e-98 362.8 287 66.9
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 6.7e-98 361.3 287 66.9
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 6.7e-98 361.3 281 67.3
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 2.5e-97 359.4 307 64.5
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 4.3e-97 358.6 233 77.3
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 4.3e-97 358.6 286 66.4
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.6e-96 356.7 280 65.7
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.6e-96 356.7 289 66.8
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 3.7e-96 355.5 275 67.6
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 4.8e-96 355.1 282 66.0
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 1.1e-95 354.0 308 62.3
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 2.4e-95 352.8 281 65.1
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 4.1e-95 352.1 226 76.1
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 4.1e-95 352.1 280 67.1
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 5.3e-95 351.7 227 75.3
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 2.6e-94 349.4 289 64.7
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 4.5e-94 348.6 271 66.8
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 4.5e-94 348.6 265 66.8
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 7.7e-94 347.8 226 76.5
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 7.7e-94 347.8 226 76.5
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 1.0e-93 347.4 280 66.1
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.3e-93 347.1 254 70.5
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.7e-93 346.7 226 74.3
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 1.7e-93 346.7 265 66.8
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.9e-93 345.9 207 81.2
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.9e-93 345.9 207 81.2
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 5.0e-93 345.1 265 68.3
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 5.0e-93 345.1 265 68.3
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 6.5e-93 344.7 226 75.7
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 1.1e-92 344.0 280 65.0
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 2.5e-92 342.8 265 67.2
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 2.1e-91 339.7 207 80.2
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 7.9e-91 337.8 207 79.7
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 2.3e-90 336.3 207 79.7
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 1.5e-89 333.6 207 80.2
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 3.3e-89 332.4 218 76.6
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 4.3e-89 332.0 206 78.2
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.7e-88 330.1 266 66.9
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 3.7e-88 328.9 224 71.9
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 6.3e-88 328.2 288 62.2
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 8.2e-88 327.8 280 61.1
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 2.4e-87 326.2 280 64.3
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 5.3e-87 325.1 208 77.4
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 1.4e-84 317.0 214 73.8
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 7.2e-84 314.7 284 60.9
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 1.2e-83 313.9 281 61.2
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 7.4e-81 304.7 182 83.5
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 4.1e-79 298.9 205 71.2
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 2.0e-78 296.6 233 66.1
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 1.5e-76 290.4 227 66.1
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 1.6e-75 287.0 288 57.6
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.0e-70 270.0 281 57.7
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 1.1e-68 264.2 204 64.7
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 2.1e-67 260.0 167 75.4
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 7.5e-65 251.5 161 78.9
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 7.5e-65 251.5 285 49.8
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 7.5e-65 251.5 162 79.0
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 1.3e-64 250.8 226 58.4
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.2e-62 244.2 285 52.3
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 1.0e-61 241.1 208 61.5
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.3e-61 240.7 225 57.3
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 5.7e-57 225.3 244 53.7
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.1e-55 221.1 261 44.8
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 2.5e-52 209.9 220 49.5
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.8e-51 206.5 116 84.5
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 5.4e-47 192.2 114 80.7
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 4.7e-43 179.1 180 56.1
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 3.9e-37 159.5 205 46.8
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.2e-24 117.1 193 40.9
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 3.2e-23 113.2 107 56.1
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 3.4e-09 66.6 63 57.1
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 3.8e-08 63.2 34 85.3
Prupe.6G248300 Prunus persica HOM05D006631 ORTHO05D334351 7.9e-06 55.5 44 65.9


User provided reference genes

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