Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 4.5e-90 334.7 189 100.0
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 7.3e-40 167.9 174 61.5
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 7.3e-40 167.9 172 68.6
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 1.5e-37 160.2 175 61.1
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 7.6e-37 157.9 175 58.3
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 2.7e-34 149.4 175 56.6
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 1.7e-33 146.7 175 56.0
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 2.3e-33 146.4 174 56.9
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 3.9e-33 145.6 175 54.3
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 6.6e-33 144.8 171 62.0
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.9e-32 143.3 175 57.1
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 1.9e-32 143.3 173 59.5
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 5.6e-32 141.7 175 56.6
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 4.8e-31 138.7 152 60.5
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 1.8e-30 136.7 173 54.3
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 2.4e-30 136.3 174 54.6
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 5.3e-30 135.2 176 59.1
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 9.0e-30 134.4 174 56.3
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 1.2e-29 134.0 192 46.4
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 1.2e-29 134.0 174 55.2
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 1.5e-29 133.7 173 55.5
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 4.5e-29 132.1 174 55.2
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 5.8e-29 131.7 174 52.9
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 1.3e-28 130.6 172 51.7
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 4.9e-28 128.6 173 59.0
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 6.4e-28 128.3 175 53.7
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 8.4e-28 127.9 174 51.7
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 1.1e-27 127.5 174 54.6
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 1.9e-27 126.7 175 51.4
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 1.9e-27 126.7 174 52.3
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 3.2e-27 125.9 174 57.5
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.2e-27 125.9 170 58.2
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.2e-27 125.9 174 57.5
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.2e-27 125.9 174 57.5
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 4.2e-27 125.6 175 57.1
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 2.7e-26 122.9 172 54.1
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 4.6e-26 122.1 172 52.9
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 4.6e-26 122.1 143 59.4
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 4.6e-26 122.1 178 52.2
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 1.0e-25 120.9 176 51.7
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 3.0e-25 119.4 173 53.8
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 3.9e-25 119.0 146 50.7
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 5.1e-25 118.6 173 52.6
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 1.5e-24 117.1 137 62.0
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 1.9e-24 116.7 173 51.4
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 1.9e-24 116.7 171 48.5
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 2.5e-24 116.3 134 60.4
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 4.3e-24 115.5 172 50.0
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 5.6e-24 115.2 175 52.6
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 7.4e-24 114.8 175 45.7
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 7.4e-24 114.8 172 50.0
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 7.4e-24 114.8 142 53.5
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 7.4e-24 114.8 172 50.0
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 1.3e-23 114.0 180 51.7
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 2.1e-23 113.2 119 66.4
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 2.1e-23 113.2 175 50.9
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 2.8e-23 112.8 172 48.8
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 2.8e-23 112.8 173 51.4
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 2.8e-23 112.8 97 79.4
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 3.7e-23 112.5 97 79.4
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 6.2e-23 111.7 174 51.1
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 8.1e-23 111.3 173 50.9
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.4e-22 110.5 176 52.3
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 1.4e-22 110.5 168 50.0
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 2.4e-22 109.8 182 52.7
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 5.3e-22 108.6 175 50.3
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 6.9e-22 108.2 172 51.2
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 9.0e-22 107.8 104 76.0
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 1.2e-21 107.5 110 67.3
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 1.5e-21 107.1 182 48.4
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.5e-21 107.1 99 75.8
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 2.0e-21 106.7 135 57.8
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 2.6e-21 106.3 107 65.4
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 2.6e-21 106.3 173 50.9
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 5.8e-21 105.1 94 78.7
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 5.8e-21 105.1 111 59.5
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 7.6e-21 104.8 131 59.5
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 9.9e-21 104.4 109 62.4
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 3.8e-20 102.4 134 57.5
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 3.8e-20 102.4 99 73.7
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 4.9e-20 102.1 109 62.4
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 4.9e-20 102.1 109 65.1
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 1.1e-19 100.9 100 70.0
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 1.9e-19 100.1 110 64.5
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 5.5e-19 98.6 87 75.9
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 7.1e-19 98.2 131 56.5
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 9.3e-19 97.8 175 48.0
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 4.6e-18 95.5 87 77.0
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 6.0e-18 95.1 93 71.0
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 7.9e-18 94.7 78 78.2
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 3.9e-17 92.4 153 49.7
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 3.3e-16 89.4 96 70.8
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 2.1e-15 86.7 82 73.2
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 8.2e-15 84.7 80 80.0
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 8.2e-15 84.7 130 55.4
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 1.4e-14 84.0 129 51.2
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.0e-13 80.1 110 58.2
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 2.6e-13 79.7 93 61.3
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 5.8e-13 78.6 94 56.4
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 1.7e-12 77.0 147 44.9
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 6.5e-12 75.1 78 75.6
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 4.2e-11 72.4 109 46.8
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.8e-09 67.0 70 70.0


User provided reference genes

Program Settings