Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 1.3e-76 290.4 250 100.0
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 5.9e-37 158.7 242 69.8
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 3.8e-36 156.0 257 69.3
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 1.1e-35 154.5 237 71.3
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.9e-35 153.7 254 68.9
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 5.5e-35 152.1 251 69.3
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 7.9e-34 148.3 234 69.7
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 1.8e-33 147.1 253 66.8
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 2.3e-33 146.7 260 66.2
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 5.2e-33 145.6 240 68.3
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 8.8e-33 144.8 239 71.1
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 1.5e-32 144.1 238 68.9
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 5.7e-32 142.1 243 65.8
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 5.7e-32 142.1 256 65.2
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 7.4e-32 141.7 251 67.3
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 1.3e-31 141.0 255 63.9
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 1.3e-31 141.0 255 65.9
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 2.2e-31 140.2 254 66.9
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 3.7e-31 139.4 251 65.3
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 4.8e-31 139.0 235 67.7
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 6.3e-31 138.7 253 65.2
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 8.2e-31 138.3 271 63.5
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 8.2e-31 138.3 263 64.6
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 8.2e-31 138.3 263 63.1
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 8.2e-31 138.3 241 68.9
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 1.1e-30 137.9 249 67.1
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 1.8e-30 137.1 234 67.9
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 4.1e-30 136.0 257 65.0
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 5.3e-30 135.6 256 64.1
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 5.3e-30 135.6 260 64.2
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.2e-29 134.4 236 66.9
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 1.6e-29 134.0 248 66.1
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.6e-29 134.0 236 66.9
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 2.0e-29 133.7 258 67.4
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.0e-29 133.7 253 64.4
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 5.9e-29 132.1 254 63.0
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.0e-28 131.3 236 66.1
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 1.3e-28 131.0 259 63.3
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 1.7e-28 130.6 258 51.2
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 6.5e-28 128.6 255 68.2
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 8.5e-28 128.3 267 61.8
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 1.1e-27 127.9 269 62.8
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 1.1e-27 127.9 237 69.2
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 1.9e-27 127.1 247 63.6
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 2.5e-27 126.7 246 61.0
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 2.5e-27 126.7 251 63.7
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 3.2e-27 126.3 245 66.1
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 1.6e-26 124.0 265 62.3
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 1.6e-26 124.0 247 63.2
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 2.1e-26 123.6 237 64.6
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 3.6e-26 122.9 238 63.0
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 1.0e-25 121.3 298 57.4
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 1.4e-25 120.9 264 61.4
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 1.4e-25 120.9 264 61.4
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 1.4e-25 120.9 237 65.0
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 1.4e-25 120.9 235 62.6
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 1.4e-25 120.9 239 64.9
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 1.4e-25 120.9 251 60.6
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 3.0e-25 119.8 239 64.0
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 5.2e-25 119.0 278 57.6
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 6.7e-25 118.6 236 64.8
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 1.2e-24 117.9 248 62.5
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 1.2e-24 117.9 249 65.5
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 1.2e-24 117.9 233 64.4
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.5e-24 117.5 233 64.8
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.3e-24 116.3 233 63.9
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 4.4e-24 115.9 71 80.3
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 5.7e-24 115.5 237 62.4
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.7e-24 115.5 233 63.9
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 5.7e-24 115.5 82 69.5
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 7.5e-24 115.2 68 80.9
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 7.5e-24 115.2 74 75.7
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 7.5e-24 115.2 69 79.7
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 9.7e-24 114.8 78 73.1
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 9.7e-24 114.8 233 64.4
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 1.3e-23 114.4 249 61.4
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 1.3e-23 114.4 249 61.4
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 1.3e-23 114.4 238 63.9
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 2.8e-23 113.2 243 61.3
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 3.7e-23 112.8 239 62.8
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 3.7e-23 112.8 239 62.8
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 6.3e-23 112.1 74 75.7
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 1.8e-22 110.5 254 58.7
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 2.4e-22 110.2 188 74.5
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 7.0e-22 108.6 241 63.5
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 1.6e-21 107.5 243 60.1
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 2.7e-21 106.7 257 65.4
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 4.5e-21 105.9 241 61.8
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 5.9e-21 105.5 239 50.2
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 7.7e-21 105.1 195 69.2
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 3.8e-20 102.8 196 54.1
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 1.9e-19 100.5 72 72.2
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 1.9e-19 100.5 234 63.2
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 1.2e-18 97.8 77 63.6
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 1.8e-17 94.0 232 64.2
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 2.3e-17 93.6 269 62.1
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 3.0e-17 93.2 210 67.1
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 2.0e-16 90.5 68 67.6
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 4.4e-16 89.4 273 55.3
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 5.7e-16 89.0 67 62.7
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 1.7e-15 87.4 68 66.2
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 3.7e-15 86.3 266 60.2
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 8.3e-15 85.1 203 67.0
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 1.6e-13 80.9 259 53.3
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 4.5e-13 79.3 209 64.1
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 1.2e-10 71.2 391 42.2
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.1e-10 70.5 226 57.5
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 2.8e-10 70.1 196 44.9
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 6.1e-10 68.9 205 32.2
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 8.0e-10 68.6 199 63.3
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 3.0e-09 66.6 66 51.5
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 4.4e-08 62.8 33 84.8
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 5.7e-08 62.4 44 61.4
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.7e-07 60.8 197 46.2
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.1e-06 58.2 35 77.1
Gorai.004G141500 Gossypium raimondii HOM05D006475 ORTHO05D007969 4.1e-06 56.2 35 74.3


User provided reference genes

Program Settings