Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 5.0e-243 844.3 533 100.0
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 1.0e-147 527.7 321 81.0
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 5.6e-146 521.9 322 80.4
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 2.4e-144 516.5 321 80.4
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 1.2e-143 514.2 320 80.3
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 2.0e-143 513.5 322 79.8
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 4.5e-143 512.3 318 80.2
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 1.3e-142 510.8 308 81.8
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 3.8e-142 509.2 321 77.6
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 7.1e-141 505.0 318 79.2
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 2.7e-140 503.1 326 77.0
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 2.7e-140 503.1 326 77.0
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 2.7e-140 503.1 319 79.6
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 3.5e-140 502.7 323 78.6
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 1.3e-139 500.7 316 79.7
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 6.7e-139 498.4 335 74.9
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.1e-138 497.7 318 77.7
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 3.3e-138 496.1 313 78.9
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 4.3e-138 495.7 319 77.4
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 4.3e-138 495.7 317 77.6
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 4.3e-138 495.7 319 77.4
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 9.6e-138 494.6 317 77.3
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 9.6e-138 494.6 321 76.9
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 1.3e-137 494.2 319 77.1
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 3.7e-137 492.7 313 77.3
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 4.8e-137 492.3 319 76.8
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 4.8e-137 492.3 314 78.0
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 6.2e-137 491.9 318 78.0
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 8.2e-137 491.5 319 77.7
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.1e-136 491.1 319 76.8
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.4e-136 490.7 319 76.8
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 3.1e-136 489.6 318 76.4
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 3.1e-136 489.6 316 77.8
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 5.3e-136 488.8 319 77.1
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 6.9e-136 488.4 320 76.6
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 9.0e-136 488.0 315 77.8
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 1.2e-135 487.6 321 76.9
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 3.4e-135 486.1 319 77.4
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 4.5e-135 485.7 318 76.7
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 4.5e-135 485.7 329 75.1
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 1.7e-134 483.8 318 76.7
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 2.2e-134 483.4 318 74.8
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 2.2e-134 483.4 320 76.2
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 2.9e-134 483.0 322 75.8
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 1.1e-133 481.1 320 75.3
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 1.9e-133 480.3 314 76.8
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 1.2e-132 477.6 317 75.4
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 6.1e-132 475.3 318 76.1
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 7.9e-132 474.9 321 74.5
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 1.3e-131 474.2 320 74.1
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 1.8e-131 473.8 315 74.3
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 3.9e-131 472.6 325 72.9
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 5.1e-131 472.2 319 71.8
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 5.1e-131 472.2 315 75.2
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 8.7e-131 471.5 318 75.8
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 1.5e-130 470.7 336 72.0
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 1.5e-130 470.7 353 68.3
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 5.7e-130 468.8 320 73.8
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 7.4e-130 468.4 316 72.2
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 7.4e-130 468.4 319 72.1
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 7.4e-130 468.4 317 73.8
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 1.3e-129 467.6 319 71.2
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 1.6e-129 467.2 319 73.4
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 2.2e-129 466.8 314 73.9
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 4.8e-129 465.7 320 71.6
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 4.8e-129 465.7 320 71.2
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 4.8e-129 465.7 321 72.9
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.8e-128 463.8 321 73.5
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 5.3e-128 462.2 317 71.0
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 5.3e-128 462.2 317 71.0
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 5.3e-128 462.2 301 73.8
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 1.2e-127 461.1 317 71.0
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.5e-127 460.7 319 71.8
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 3.4e-127 459.5 337 72.1
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 5.9e-127 458.8 317 70.3
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 3.6e-124 449.5 358 67.0
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 6.1e-124 448.7 311 73.3
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 6.7e-123 445.3 338 68.6
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 6.7e-123 445.3 318 69.8
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 4.3e-122 442.6 291 74.9
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 6.3e-121 438.7 315 69.8
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 1.1e-120 438.0 389 61.4
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 3.1e-120 436.4 315 69.8
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 5.3e-120 435.6 317 69.1
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 2.6e-119 433.3 318 67.9
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 6.5e-118 428.7 320 68.1
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 4.2e-109 399.4 257 77.0
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 1.8e-107 394.0 559 44.4
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 1.1e-106 391.3 265 72.1
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 8.5e-102 375.2 294 63.3
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 1.5e-101 374.4 302 64.2
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 3.6e-100 369.8 306 61.8
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 5.2e-99 365.9 279 68.5
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 3.0e-91 340.1 229 74.2
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 6.3e-89 332.4 222 74.3
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 6.6e-86 322.4 221 72.4
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 7.2e-85 318.9 290 57.9
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 2.9e-73 280.4 314 52.9
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 8.3e-73 278.9 189 74.6
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 4.9e-65 253.1 190 70.0
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 2.1e-55 221.1 129 76.0
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 1.8e-51 208.0 153 68.0
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 4.2e-48 196.8 176 60.8
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 1.1e-40 172.2 264 38.6
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 2.3e-30 137.9 69 88.4
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 6.7e-30 136.3 197 47.2
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 2.1e-28 131.3 83 78.3
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 1.4e-27 128.6 87 72.4
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 9.0e-27 125.9 86 73.3
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 3.8e-25 120.6 93 66.7
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 1.2e-23 115.5 115 58.3
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 1.9e-21 108.2 60 81.7
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.8e-19 101.7 62 79.0
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 3.1e-19 100.9 62 79.0
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 5.9e-18 96.7 60 75.0
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.1e-16 92.4 63 74.6
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 1.2e-15 89.0 48 83.3
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 1.0e-14 85.9 48 81.2
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 3.9e-14 84.0 67 64.2
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 3.3e-13 80.9 111 36.0
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 1.1e-11 75.9 57 63.2
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 1.1e-11 75.9 39 89.7


User provided reference genes

Program Settings