Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 0.0e+00 1237.2 616 100.0
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 9.0e-281 969.9 616 74.5
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 3.8e-279 964.5 620 73.1
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 1.6e-277 959.1 584 77.4
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 3.9e-276 954.5 592 75.0
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 2.0e-275 952.2 594 75.3
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 5.7e-275 950.7 588 75.7
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 7.4e-275 950.3 592 74.7
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 1.1e-273 946.4 587 74.8
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 4.1e-273 944.5 584 76.5
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 5.3e-273 944.1 584 76.5
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 9.1e-273 943.3 619 73.5
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 1.2e-272 943.0 585 73.8
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 1.2e-272 943.0 590 74.4
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 3.4e-272 941.4 616 71.8
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 5.9e-272 940.6 589 74.2
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.5e-270 935.3 618 73.1
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 2.5e-270 935.3 593 73.2
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 3.2e-270 934.9 585 75.2
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 7.2e-270 933.7 592 74.3
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 9.4e-270 933.3 587 73.3
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 2.1e-269 932.2 589 73.9
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 4.7e-269 931.0 587 75.5
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 1.8e-268 929.1 617 71.5
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 5.1e-268 927.5 600 73.3
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 9.7e-267 923.3 586 73.2
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 9.7e-267 923.3 586 73.0
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 1.3e-266 922.9 586 72.7
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 1.3e-266 922.9 589 73.0
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 2.2e-266 922.2 591 73.3
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 2.2e-266 922.2 589 73.2
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 2.8e-266 921.8 586 72.9
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 2.8e-266 921.8 585 73.0
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 3.7e-266 921.4 591 73.1
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 2.0e-264 915.6 584 73.3
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 4.5e-264 914.4 626 69.2
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 5.9e-264 914.1 586 72.4
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 5.9e-264 914.1 593 72.8
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 2.2e-263 912.1 587 72.4
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 3.8e-263 911.4 593 73.0
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 8.5e-263 910.2 615 70.1
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 1.1e-262 909.8 585 72.5
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 3.2e-262 908.3 587 71.9
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 5.5e-262 907.5 585 71.1
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 2.7e-261 905.2 598 70.7
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 4.0e-260 901.4 585 72.3
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 5.2e-260 901.0 583 72.7
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 2.6e-259 898.7 587 73.4
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 5.7e-259 897.5 586 71.3
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 9.7e-259 896.7 585 71.6
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 2.8e-258 895.2 587 73.4
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 4.8e-258 894.4 584 71.6
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 6.3e-258 894.0 586 72.2
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 1.4e-257 892.9 668 64.5
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 1.8e-257 892.5 586 70.8
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 7.7e-256 887.1 586 71.2
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 1.7e-255 885.9 585 70.6
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 8.0e-253 877.1 593 69.3
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 8.8e-252 873.6 616 68.3
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 1.5e-251 872.8 584 71.7
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 2.6e-251 872.1 542 74.0
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.6e-251 872.1 616 68.2
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.6e-251 872.1 616 68.3
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 1.3e-250 869.8 590 68.5
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.7e-250 869.4 616 68.0
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 4.8e-250 867.8 595 68.6
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 1.2e-248 863.2 586 68.8
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.7e-248 862.1 587 69.3
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 8.0e-245 850.5 549 73.0
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 1.0e-244 850.1 586 68.3
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 2.3e-244 849.0 597 69.5
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 4.0e-244 848.2 586 70.1
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 4.0e-244 848.2 593 68.3
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 1.2e-240 836.6 585 67.9
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 5.9e-240 834.3 589 67.9
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 5.9e-240 834.3 586 68.1
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 2.9e-239 832.0 586 67.9
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 1.1e-238 830.1 583 69.3
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 9.5e-238 827.0 623 65.7
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 1.8e-236 822.8 626 66.0
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 1.4e-233 813.1 625 65.0
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 1.4e-233 813.1 625 65.0
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 2.4e-233 812.4 625 65.3
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 1.7e-231 806.2 553 67.5
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 1.1e-230 803.5 599 66.4
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 1.2e-229 800.0 588 65.3
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 1.8e-228 796.2 598 65.6
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 3.1e-228 795.4 546 68.3
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 8.9e-228 793.9 623 64.7
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 2.7e-216 755.7 628 60.4
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 4.7e-213 745.0 583 62.6
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 1.7e-207 726.5 584 61.0
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 7.3e-198 694.5 589 59.8
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 1.1e-193 680.6 587 58.6
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 1.7e-191 673.3 568 57.9
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 2.9e-186 656.0 485 65.4
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 8.1e-181 637.9 595 55.1
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 2.9e-178 629.4 606 53.6
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 1.1e-172 610.9 610 52.1
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 5.7e-166 588.6 582 50.0
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 1.3e-165 587.4 373 70.8
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 3.0e-135 486.5 512 50.0
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 1.7e-122 444.1 255 79.2
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 2.1e-96 357.5 210 77.6
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 1.8e-71 274.6 208 63.9
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 8.7e-66 255.8 196 60.2
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 3.0e-58 230.7 227 53.7
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 6.7e-50 203.0 107 83.2
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 1.8e-42 178.3 133 58.6
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 1.2e-27 129.0 101 59.4
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 6.1e-27 126.7 80 75.0
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 2.8e-24 117.9 65 75.4
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 4.5e-22 110.5 65 72.3
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.7e-14 84.7 82 52.4
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 1.3e-13 82.4 37 94.6
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 1.3e-13 82.4 43 86.0
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 1.1e-12 79.3 135 39.3
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 1.2e-11 75.9 39 84.6
Zm00001eb027230 Zea mays HOM05D006696 ORTHO05D008683 5.9e-06 57.0 79 45.6


User provided reference genes

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