Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 5.5e-229 797.3 423 100.0
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.4e-171 606.7 392 86.5
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 2.2e-132 476.5 404 65.8
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 8.8e-126 454.5 415 65.3
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 5.7e-125 451.8 415 63.1
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.3e-124 450.7 415 63.9
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.7e-124 450.3 415 63.1
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 6.3e-124 448.4 415 64.8
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.8e-123 446.8 407 63.9
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 7.0e-123 444.9 410 63.9
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 1.5e-122 443.7 415 63.6
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.5e-122 443.7 415 63.1
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 2.0e-122 443.4 410 63.9
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.6e-122 443.0 410 63.9
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.9e-122 441.8 402 63.9
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 7.7e-122 441.4 403 62.8
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.8e-121 439.1 402 63.7
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.1e-120 437.6 416 62.7
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 1.4e-120 437.2 395 63.8
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.4e-120 437.2 395 63.8
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.5e-120 436.4 402 63.7
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 2.5e-120 436.4 415 62.9
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 2.1e-119 433.3 411 62.0
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 3.9e-118 429.1 416 60.1
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.1e-117 427.6 406 61.3
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 2.0e-117 426.8 400 62.2
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 5.7e-117 425.2 403 62.0
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 1.7e-116 423.7 409 61.9
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 8.2e-116 421.4 397 62.2
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.4e-115 420.6 420 61.2
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 2.4e-115 419.9 395 61.0
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 2.4e-115 419.9 406 60.8
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 5.3e-115 418.7 405 61.2
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.2e-114 417.5 412 59.7
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 2.0e-114 416.8 397 62.7
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 1.0e-113 414.5 405 58.3
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 1.3e-113 414.1 408 59.6
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.2e-113 413.3 395 62.0
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 6.5e-113 411.8 406 60.6
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.1e-112 411.0 411 59.9
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.9e-112 410.2 403 59.8
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 7.2e-112 408.3 412 58.0
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 9.4e-112 407.9 406 57.9
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 1.6e-111 407.1 410 58.5
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.7e-111 406.4 406 57.4
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 3.6e-111 406.0 417 57.6
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.0e-110 404.4 415 56.6
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 1.4e-110 404.1 401 60.1
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.4e-110 404.1 402 59.0
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 1.8e-110 403.7 411 58.4
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.2e-109 401.0 409 58.4
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.3e-108 397.5 399 59.4
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 2.2e-108 396.7 400 59.0
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 3.7e-108 396.0 407 56.5
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.1e-107 394.4 417 56.1
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 1.8e-107 393.7 423 55.1
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 2.4e-107 393.3 416 55.8
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 2.0e-106 390.2 412 57.0
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 2.0e-106 390.2 399 57.9
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 2.0e-106 390.2 411 58.9
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 2.0e-106 390.2 410 57.8
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 4.5e-106 389.0 411 55.5
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 4.5e-106 389.0 405 57.0
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 5.9e-106 388.7 411 56.0
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.3e-105 387.5 397 58.9
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.3e-105 387.5 402 56.0
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 2.9e-105 386.3 407 57.7
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.9e-105 386.3 414 54.1
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 3.8e-105 386.0 405 57.3
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 3.8e-105 386.0 396 58.8
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 6.5e-105 385.2 408 57.6
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 8.5e-105 384.8 409 53.8
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 4.2e-104 382.5 428 52.8
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 6.1e-103 378.6 415 53.3
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 1.0e-102 377.9 407 56.8
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.4e-102 377.5 389 60.2
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 4.0e-102 375.9 412 55.1
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 6.8e-102 375.2 400 57.2
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 6.8e-102 375.2 400 57.0
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 4.4e-101 372.5 405 55.1
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.7e-100 370.5 404 55.0
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.8e-99 367.1 413 52.8
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 2.0e-98 363.6 406 53.7
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 2.0e-98 363.6 406 53.7
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 6.8e-94 348.6 405 54.1
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 2.6e-93 346.7 397 53.1
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 2.6e-93 346.7 397 53.1
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 2.2e-92 343.6 355 56.3
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 3.7e-92 342.8 397 52.9
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 3.7e-92 342.8 397 52.9
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 1.1e-91 341.3 397 52.6
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 1.1e-91 341.3 402 52.0
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 3.5e-90 336.3 412 50.5
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 2.9e-89 333.2 407 49.9
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 3.3e-88 329.7 382 52.6
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 3.1e-86 323.2 414 46.6
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.2e-85 321.2 407 47.7
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 3.3e-72 276.6 243 61.3
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 4.4e-69 266.2 330 51.8
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 6.2e-55 219.2 273 49.1
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.8e-54 217.6 396 37.4
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.8e-54 217.6 269 52.8
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 1.0e-49 201.8 208 58.2
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 4.3e-48 196.4 146 68.5
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 3.6e-47 193.4 412 35.0
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 5.3e-46 189.5 383 35.0
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.9e-41 173.3 117 79.5
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.9e-40 171.0 105 81.9
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 5.3e-38 162.9 178 55.6
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 6.9e-38 162.5 131 65.6
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 7.6e-37 159.1 149 59.1
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 1.3e-36 158.3 444 31.1
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 2.9e-36 157.1 435 29.7
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 6.3e-23 112.8 120 57.5
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 1.1e-14 85.5 56 82.1
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 5.3e-14 83.2 427 24.6
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 6.5e-12 76.3 54 64.8
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 1.4e-09 68.6 37 86.5
RcHm_v2.0_Chr3g0480231 Rosa chinensis HOM05D006621 ORTHO05D043305 9.1e-06 55.8 41 75.6


User provided reference genes

Program Settings